EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007915 (Gene tree)
Gene ID: 109995673
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7336 bases
Position: chrFKLU01000011.1:1669283-1676618
Accession: 109995673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000010207	RRM_1	PF00076.22	1.4e-40	1	3
ENSLBEP00000010207	RRM_1	PF00076.22	1.4e-40	2	3
ENSLBEP00000010207	RRM_1	PF00076.22	1.4e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010769	-	2535	XM_020649488	ENSLBEP00000010207	579 (aa)	XP_020505144	UPI0009B46AB8

Gene Model

Click here to download ENSLBEG00000007915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007915	-	70	99.259	ENSLBEG00000014278	-	92	99.259
ENSLBEG00000007915	-	66	43.223	ENSLBEG00000019073	ncl	61	42.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007915	-	97	54.799	ENSAPOG00000014534	-	92	54.409	Acanthochromis_polyacanthus
ENSLBEG00000007915	-	66	43.478	ENSAPOG00000023888	ncl	67	41.037	Acanthochromis_polyacanthus
ENSLBEG00000007915	-	67	43.797	ENSACIG00000013234	ncl	68	43.230	Amphilophus_citrinellus
ENSLBEG00000007915	-	66	43.990	ENSAOCG00000003133	ncl	64	40.977	Amphiprion_ocellaris
ENSLBEG00000007915	-	97	52.751	ENSAOCG00000014792	-	92	54.050	Amphiprion_ocellaris
ENSLBEG00000007915	-	97	52.520	ENSAPEG00000013612	-	92	53.821	Amphiprion_percula
ENSLBEG00000007915	-	66	43.990	ENSAPEG00000002769	ncl	64	41.489	Amphiprion_percula
ENSLBEG00000007915	-	66	45.269	ENSATEG00000013343	ncl	64	42.299	Anabas_testudineus
ENSLBEG00000007915	-	99	55.668	ENSATEG00000019862	-	92	63.516	Anabas_testudineus
ENSLBEG00000007915	-	62	41.351	ENSAPLG00000012897	-	65	40.587	Anas_platyrhynchos
ENSLBEG00000007915	-	63	42.933	ENSACAG00000001006	-	51	42.487	Anolis_carolinensis
ENSLBEG00000007915	-	54	43.574	ENSACLG00000026031	ncl	87	43.750	Astatotilapia_calliptera
ENSLBEG00000007915	-	66	40.513	ENSAMXG00000001647	ncl	86	41.617	Astyanax_mexicanus
ENSLBEG00000007915	-	61	31.549	ENSCHIG00000012665	-	57	31.463	Capra_hircus
ENSLBEG00000007915	-	64	41.316	ENSCPBG00000016444	-	60	40.000	Chrysemys_picta_bellii
ENSLBEG00000007915	-	69	39.889	ENSCSEG00000015089	ncl	58	42.025	Cynoglossus_semilaevis
ENSLBEG00000007915	-	65	43.478	ENSCVAG00000012600	ncl	57	42.927	Cyprinodon_variegatus
ENSLBEG00000007915	-	70	43.467	ENSDARG00000002710	ncl	83	43.953	Danio_rerio
ENSLBEG00000007915	-	62	34.349	ENSDNOG00000031611	-	64	34.574	Dasypus_novemcinctus
ENSLBEG00000007915	-	66	34.974	ENSDNOG00000040257	-	82	31.693	Dasypus_novemcinctus
ENSLBEG00000007915	-	68	35.338	ENSEBUG00000016173	ncl	52	35.661	Eptatretus_burgeri
ENSLBEG00000007915	-	65	44.330	ENSELUG00000006033	ncl	57	45.137	Esox_lucius
ENSLBEG00000007915	-	66	50.000	ENSELUG00000022826	-	88	48.219	Esox_lucius
ENSLBEG00000007915	-	65	39.796	ENSFALG00000007592	-	57	39.709	Ficedula_albicollis
ENSLBEG00000007915	-	66	43.959	ENSFHEG00000018000	ncl	70	40.899	Fundulus_heteroclitus
ENSLBEG00000007915	-	67	41.371	ENSGMOG00000001341	ncl	63	40.534	Gadus_morhua
ENSLBEG00000007915	-	65	39.898	ENSGALG00000032930	NCL	56	39.604	Gallus_gallus
ENSLBEG00000007915	-	66	43.188	ENSGAFG00000015375	ncl	62	40.678	Gambusia_affinis
ENSLBEG00000007915	-	66	42.894	ENSGACG00000008970	ncl	61	42.785	Gasterosteus_aculeatus
ENSLBEG00000007915	-	64	40.789	ENSGAGG00000013330	-	56	40.355	Gopherus_agassizii
ENSLBEG00000007915	-	65	43.194	ENSHBUG00000006869	ncl	55	43.392	Haplochromis_burtoni
ENSLBEG00000007915	-	66	43.990	ENSHCOG00000010234	ncl	64	40.299	Hippocampus_comes
ENSLBEG00000007915	-	63	41.066	ENSIPUG00000024556	ncl	85	40.719	Ictalurus_punctatus
ENSLBEG00000007915	-	66	43.702	ENSKMAG00000008111	ncl	64	41.290	Kryptolebias_marmoratus
ENSLBEG00000007915	-	70	39.904	ENSLACG00000022167	-	85	40.338	Latimeria_chalumnae
ENSLBEG00000007915	-	66	43.544	ENSLACG00000009328	ncl	69	40.598	Latimeria_chalumnae
ENSLBEG00000007915	-	63	41.287	ENSLOCG00000004828	ncl	52	40.898	Lepisosteus_oculatus
ENSLBEG00000007915	-	80	56.875	ENSMAMG00000003479	-	88	53.069	Mastacembelus_armatus
ENSLBEG00000007915	-	65	43.194	ENSMZEG00005017438	ncl	54	43.544	Maylandia_zebra
ENSLBEG00000007915	-	64	40.374	ENSMGAG00000008147	-	86	40.476	Meleagris_gallopavo
ENSLBEG00000007915	-	54	42.857	ENSMMOG00000008553	ncl	86	42.941	Mola_mola
ENSLBEG00000007915	-	65	40.921	ENSMODG00000002470	-	56	40.686	Monodelphis_domestica
ENSLBEG00000007915	-	69	42.350	ENSMALG00000014827	ncl	65	41.135	Monopterus_albus
ENSLBEG00000007915	-	58	31.378	ENSMPUG00000001663	-	59	31.378	Mustela_putorius_furo
ENSLBEG00000007915	-	61	40.896	ENSMEUG00000012335	-	57	39.454	Notamacropus_eugenii
ENSLBEG00000007915	-	65	43.194	ENSONIG00000012508	ncl	55	43.392	Oreochromis_niloticus
ENSLBEG00000007915	-	65	50.646	ENSONIG00000010631	-	97	50.646	Oreochromis_niloticus
ENSLBEG00000007915	-	61	43.370	ENSOANG00000008732	-	60	42.746	Ornithorhynchus_anatinus
ENSLBEG00000007915	-	64	43.733	ENSORLG00000007055	ncl	60	42.637	Oryzias_latipes
ENSLBEG00000007915	-	67	47.859	ENSORLG00000004645	-	85	47.859	Oryzias_latipes
ENSLBEG00000007915	-	67	47.103	ENSORLG00020003497	-	77	47.103	Oryzias_latipes_hni
ENSLBEG00000007915	-	66	43.702	ENSORLG00020017943	ncl	60	42.637	Oryzias_latipes_hni
ENSLBEG00000007915	-	67	48.363	ENSORLG00015006613	-	80	48.363	Oryzias_latipes_hsok
ENSLBEG00000007915	-	65	43.264	ENSORLG00015013815	ncl	87	43.505	Oryzias_latipes_hsok
ENSLBEG00000007915	-	66	44.987	ENSOMEG00000020786	ncl	61	42.405	Oryzias_melastigma
ENSLBEG00000007915	-	67	47.462	ENSOMEG00000015864	-	84	47.462	Oryzias_melastigma
ENSLBEG00000007915	-	66	44.615	ENSPKIG00000002604	ncl	57	44.019	Paramormyrops_kingsleyae
ENSLBEG00000007915	-	68	40.394	ENSPSIG00000002361	-	52	41.361	Pelodiscus_sinensis
ENSLBEG00000007915	-	66	41.753	ENSPMGG00000004709	ncl	84	41.369	Periophthalmus_magnuspinnatus
ENSLBEG00000007915	-	61	42.120	ENSPCIG00000003293	-	52	41.316	Phascolarctos_cinereus
ENSLBEG00000007915	-	66	43.188	ENSPFOG00000024205	ncl	62	40.928	Poecilia_formosa
ENSLBEG00000007915	-	66	43.188	ENSPLAG00000024026	ncl	62	41.489	Poecilia_latipinna
ENSLBEG00000007915	-	66	43.188	ENSPMEG00000006000	ncl	62	41.226	Poecilia_mexicana
ENSLBEG00000007915	-	65	43.194	ENSPNYG00000020494	ncl	56	43.284	Pundamilia_nyererei
ENSLBEG00000007915	-	66	43.299	ENSPNAG00000006192	ncl	54	43.350	Pygocentrus_nattereri
ENSLBEG00000007915	-	65	37.533	ENSSHAG00000002702	-	61	36.935	Sarcophilus_harrisii
ENSLBEG00000007915	-	63	35.772	ENSSFOG00015013153	-	82	36.873	Scleropages_formosus
ENSLBEG00000007915	-	66	44.246	ENSSFOG00015008583	ncl	63	43.437	Scleropages_formosus
ENSLBEG00000007915	-	93	56.771	ENSSMAG00000007582	-	93	56.207	Scophthalmus_maximus
ENSLBEG00000007915	-	66	44.216	ENSSMAG00000021241	ncl	56	44.169	Scophthalmus_maximus
ENSLBEG00000007915	-	66	43.478	ENSSDUG00000006128	ncl	91	43.171	Seriola_dumerili
ENSLBEG00000007915	-	94	60.606	ENSSDUG00000010922	-	93	60.816	Seriola_dumerili
ENSLBEG00000007915	-	94	61.002	ENSSLDG00000015784	-	93	61.634	Seriola_lalandi_dorsalis
ENSLBEG00000007915	-	66	42.931	ENSSLDG00000002012	ncl	65	41.277	Seriola_lalandi_dorsalis
ENSLBEG00000007915	-	71	38.864	ENSSPUG00000008244	-	67	38.987	Sphenodon_punctatus
ENSLBEG00000007915	-	96	55.167	ENSSPAG00000001859	-	92	55.348	Stegastes_partitus
ENSLBEG00000007915	-	66	41.206	ENSTGUG00000009782	-	63	41.063	Taeniopygia_guttata
ENSLBEG00000007915	-	64	44.415	ENSTRUG00000008185	ncl	61	42.326	Takifugu_rubripes
ENSLBEG00000007915	-	63	45.040	ENSTNIG00000012186	ncl	64	44.279	Tetraodon_nigroviridis
ENSLBEG00000007915	-	66	43.299	ENSXETG00000009517	ncl	54	43.687	Xenopus_tropicalis
ENSLBEG00000007915	-	66	38.619	ENSXCOG00000003524	ncl	89	37.990	Xiphophorus_couchianus
ENSLBEG00000007915	-	65	57.031	ENSXCOG00000007369	-	89	57.031	Xiphophorus_couchianus
ENSLBEG00000007915	-	66	44.473	ENSXMAG00000005914	ncl	63	41.597	Xiphophorus_maculatus