EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007971 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 421 bases
Position: chrFKLU01000027.1:888655-889075
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000010289	SM-ATX	PF14438.6	3.8e-08	1	1
ENSLBEP00000010289	LSM14	PF12701.7	9.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010851	-	315	-	ENSLBEP00000010289	104 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000007971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007971	-	94	69.388	ENSLBEG00000010487	lsm14aa	84	69.388
ENSLBEG00000007971	-	94	68.367	ENSLBEG00000016427	lsm14b	69	68.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007971	-	91	80.000	ENSAPOG00000009997	-	88	80.000	Acanthochromis_polyacanthus
ENSLBEG00000007971	-	100	82.692	ENSACIG00000003134	-	83	82.692	Amphilophus_citrinellus
ENSLBEG00000007971	-	93	81.443	ENSAPEG00000013779	-	96	81.443	Amphiprion_percula
ENSLBEG00000007971	-	81	90.476	ENSATEG00000015882	-	95	90.476	Anabas_testudineus
ENSLBEG00000007971	-	92	86.458	ENSCVAG00000012411	-	99	86.458	Cyprinodon_variegatus
ENSLBEG00000007971	-	92	66.667	ENSCVAG00000005570	-	99	66.667	Cyprinodon_variegatus
ENSLBEG00000007971	-	92	84.375	ENSGAFG00000013718	-	99	84.375	Gambusia_affinis
ENSLBEG00000007971	-	88	71.429	ENSHBUG00000011864	-	68	71.429	Haplochromis_burtoni
ENSLBEG00000007971	-	97	80.198	ENSHBUG00000012323	-	94	80.198	Haplochromis_burtoni
ENSLBEG00000007971	-	88	67.033	ENSHCOG00000004862	-	83	67.033	Hippocampus_comes
ENSLBEG00000007971	-	87	84.444	ENSKMAG00000016674	-	94	77.885	Kryptolebias_marmoratus
ENSLBEG00000007971	-	92	85.417	ENSKMAG00000012850	-	99	85.417	Kryptolebias_marmoratus
ENSLBEG00000007971	-	93	71.134	ENSNGAG00000016305	-	78	71.134	Nannospalax_galili
ENSLBEG00000007971	-	88	72.527	ENSNBRG00000022606	-	68	72.527	Neolamprologus_brichardi
ENSLBEG00000007971	-	97	79.208	ENSNBRG00000022370	-	94	79.208	Neolamprologus_brichardi
ENSLBEG00000007971	-	92	81.443	ENSORLG00020018184	-	99	81.443	Oryzias_latipes_hni
ENSLBEG00000007971	-	77	85.000	ENSOMEG00000007241	-	96	85.000	Oryzias_melastigma
ENSLBEG00000007971	-	98	72.549	ENSPKIG00000003275	lsm14b	94	72.549	Paramormyrops_kingsleyae
ENSLBEG00000007971	-	98	67.647	ENSPMGG00000014569	lsm14b	64	67.647	Periophthalmus_magnuspinnatus
ENSLBEG00000007971	-	78	77.778	ENSPMGG00000004595	-	82	77.778	Periophthalmus_magnuspinnatus
ENSLBEG00000007971	-	92	66.667	ENSPREG00000016484	-	62	66.667	Poecilia_reticulata
ENSLBEG00000007971	-	78	87.654	ENSPREG00000007817	-	93	87.654	Poecilia_reticulata
ENSLBEG00000007971	-	97	80.198	ENSPNYG00000021706	-	93	80.198	Pundamilia_nyererei
ENSLBEG00000007971	-	88	71.429	ENSPNYG00000019601	-	68	71.429	Pundamilia_nyererei
ENSLBEG00000007971	-	86	90.000	ENSSLDG00000011341	-	98	90.000	Seriola_lalandi_dorsalis
ENSLBEG00000007971	-	78	69.136	ENSSLDG00000011706	-	88	69.136	Seriola_lalandi_dorsalis
ENSLBEG00000007971	-	86	90.000	ENSSLDG00000012686	-	98	90.000	Seriola_lalandi_dorsalis
ENSLBEG00000007971	-	91	83.158	ENSSPAG00000018837	-	94	83.158	Stegastes_partitus
ENSLBEG00000007971	-	83	82.558	ENSXCOG00000011423	-	95	82.558	Xiphophorus_couchianus
ENSLBEG00000007971	-	88	69.231	ENSXCOG00000017365	-	92	69.231	Xiphophorus_couchianus
ENSLBEG00000007971	-	83	82.558	ENSXMAG00000015481	-	95	82.558	Xiphophorus_maculatus