EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000008088 (Gene tree)
Gene ID: 109991207
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 13686 bases
Position: chrFKLU01000200.1:933585-947270
Accession: 109991207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000010461	ResIII	PF04851.15	1.4e-07	1	1
ENSLBEP00000010492	ResIII	PF04851.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000011025	-	3420	XM_020643461	ENSLBEP00000010461	1051 (aa)	XP_020499117	UPI0009B46B50
ENSLBET00000011056	-	3441	-	ENSLBEP00000010492	1058 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000008088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000008088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000008088	smarcad1a	50	38.202	ENSLBEG00000009390	-	90	42.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000008088	smarcad1a	63	65.821	ENSG00000163104	SMARCAD1	99	67.845	Homo_sapiens
ENSLBEG00000008088	smarcad1a	99	76.894	ENSAPOG00000011446	smarcad1a	100	76.007	Acanthochromis_polyacanthus
ENSLBEG00000008088	smarcad1a	63	65.821	ENSAMEG00000005844	SMARCAD1	65	65.821	Ailuropoda_melanoleuca
ENSLBEG00000008088	smarcad1a	79	75.960	ENSACIG00000018326	smarcad1a	94	86.677	Amphilophus_citrinellus
ENSLBEG00000008088	smarcad1a	99	78.058	ENSAOCG00000019762	smarcad1a	100	77.247	Amphiprion_ocellaris
ENSLBEG00000008088	smarcad1a	99	78.151	ENSAPEG00000003889	smarcad1a	100	77.341	Amphiprion_percula
ENSLBEG00000008088	smarcad1a	94	78.932	ENSATEG00000015608	smarcad1a	99	78.932	Anabas_testudineus
ENSLBEG00000008088	smarcad1a	80	65.879	ENSAPLG00000004630	SMARCAD1	87	63.932	Anas_platyrhynchos
ENSLBEG00000008088	smarcad1a	78	67.290	ENSACAG00000013554	SMARCAD1	82	64.069	Anolis_carolinensis
ENSLBEG00000008088	smarcad1a	81	65.821	ENSANAG00000020488	SMARCAD1	89	65.821	Aotus_nancymaae
ENSLBEG00000008088	smarcad1a	99	74.460	ENSACLG00000017063	smarcad1a	100	73.709	Astatotilapia_calliptera
ENSLBEG00000008088	smarcad1a	64	72.496	ENSAMXG00000015470	smarcad1a	92	72.496	Astyanax_mexicanus
ENSLBEG00000008088	smarcad1a	76	68.263	ENSAMXG00000019130	smarcad1b	86	69.956	Astyanax_mexicanus
ENSLBEG00000008088	smarcad1a	63	65.327	ENSBTAG00000017061	SMARCAD1	65	65.327	Bos_taurus
ENSLBEG00000008088	smarcad1a	62	41.857	WBGene00010845	M03C11.8	71	40.169	Caenorhabditis_elegans
ENSLBEG00000008088	smarcad1a	63	65.821	ENSCJAG00000006778	SMARCAD1	65	65.821	Callithrix_jacchus
ENSLBEG00000008088	smarcad1a	78	65.970	ENSCAFG00000010026	SMARCAD1	78	65.970	Canis_familiaris
ENSLBEG00000008088	smarcad1a	79	65.970	ENSCAFG00020003994	SMARCAD1	91	65.970	Canis_lupus_dingo
ENSLBEG00000008088	smarcad1a	63	65.672	ENSCHIG00000012905	SMARCAD1	65	65.672	Capra_hircus
ENSLBEG00000008088	smarcad1a	63	65.672	ENSTSYG00000002706	SMARCAD1	65	65.672	Carlito_syrichta
ENSLBEG00000008088	smarcad1a	77	58.733	ENSCAPG00000016744	SMARCAD1	84	59.322	Cavia_aperea
ENSLBEG00000008088	smarcad1a	79	66.119	ENSCPOG00000011398	SMARCAD1	78	66.119	Cavia_porcellus
ENSLBEG00000008088	smarcad1a	63	65.970	ENSCCAG00000022264	SMARCAD1	99	68.013	Cebus_capucinus
ENSLBEG00000008088	smarcad1a	79	65.821	ENSCATG00000035663	SMARCAD1	91	65.821	Cercocebus_atys
ENSLBEG00000008088	smarcad1a	77	65.821	ENSCSAG00000004186	SMARCAD1	93	65.821	Chlorocebus_sabaeus
ENSLBEG00000008088	smarcad1a	99	61.765	ENSCPBG00000013203	SMARCAD1	96	64.577	Chrysemys_picta_bellii
ENSLBEG00000008088	smarcad1a	62	50.227	ENSCING00000001688	-	99	50.227	Ciona_intestinalis
ENSLBEG00000008088	smarcad1a	63	65.672	ENSCANG00000003556	SMARCAD1	99	67.845	Colobus_angolensis_palliatus
ENSLBEG00000008088	smarcad1a	92	65.373	ENSCGRG00001015056	Smarcad1	94	65.373	Cricetulus_griseus_chok1gshd
ENSLBEG00000008088	smarcad1a	92	65.373	ENSCGRG00000014087	Smarcad1	94	65.373	Cricetulus_griseus_crigri
ENSLBEG00000008088	smarcad1a	99	69.972	ENSCSEG00000017903	smarcad1a	100	70.233	Cynoglossus_semilaevis
ENSLBEG00000008088	smarcad1a	99	70.709	ENSCSEG00000014419	-	100	70.561	Cynoglossus_semilaevis
ENSLBEG00000008088	smarcad1a	99	57.750	ENSDARG00000014041	smarcad1a	100	58.302	Danio_rerio
ENSLBEG00000008088	smarcad1a	72	75.422	ENSDARG00000073721	smarcad1b	81	74.290	Danio_rerio
ENSLBEG00000008088	smarcad1a	63	65.672	ENSDNOG00000000806	-	65	65.672	Dasypus_novemcinctus
ENSLBEG00000008088	smarcad1a	62	45.166	FBgn0032157	Etl1	82	44.397	Drosophila_melanogaster
ENSLBEG00000008088	smarcad1a	61	48.382	ENSEBUG00000003969	smarcad1a	99	47.671	Eptatretus_burgeri
ENSLBEG00000008088	smarcad1a	63	65.821	ENSEASG00005012382	SMARCAD1	75	63.785	Equus_asinus_asinus
ENSLBEG00000008088	smarcad1a	63	65.821	ENSECAG00000011562	SMARCAD1	65	65.821	Equus_caballus
ENSLBEG00000008088	smarcad1a	99	65.945	ENSELUG00000018535	smarcad1a	100	65.169	Esox_lucius
ENSLBEG00000008088	smarcad1a	63	71.256	ENSELUG00000019154	smarcad1b	67	71.256	Esox_lucius
ENSLBEG00000008088	smarcad1a	63	65.970	ENSFCAG00000003958	SMARCAD1	99	68.013	Felis_catus
ENSLBEG00000008088	smarcad1a	97	62.791	ENSFALG00000006089	SMARCAD1	93	67.018	Ficedula_albicollis
ENSLBEG00000008088	smarcad1a	90	66.269	ENSFDAG00000017027	SMARCAD1	79	66.269	Fukomys_damarensis
ENSLBEG00000008088	smarcad1a	99	68.282	ENSFHEG00000012778	smarcad1a	100	67.308	Fundulus_heteroclitus
ENSLBEG00000008088	smarcad1a	91	79.858	ENSGMOG00000018995	smarcad1a	99	79.943	Gadus_morhua
ENSLBEG00000008088	smarcad1a	75	63.663	ENSGALG00000037339	SMARCAD1	88	63.663	Gallus_gallus
ENSLBEG00000008088	smarcad1a	99	65.639	ENSGAFG00000013498	smarcad1a	63	78.684	Gambusia_affinis
ENSLBEG00000008088	smarcad1a	84	84.680	ENSGACG00000007327	smarcad1a	99	85.653	Gasterosteus_aculeatus
ENSLBEG00000008088	smarcad1a	99	48.955	ENSGAGG00000008582	SMARCAD1	68	63.675	Gopherus_agassizii
ENSLBEG00000008088	smarcad1a	63	65.821	ENSGGOG00000023001	SMARCAD1	65	65.821	Gorilla_gorilla
ENSLBEG00000008088	smarcad1a	99	74.554	ENSHBUG00000011042	smarcad1a	100	73.803	Haplochromis_burtoni
ENSLBEG00000008088	smarcad1a	90	66.269	ENSHGLG00000005070	SMARCAD1	79	66.269	Heterocephalus_glaber_female
ENSLBEG00000008088	smarcad1a	90	66.269	ENSHGLG00100006812	SMARCAD1	79	66.269	Heterocephalus_glaber_male
ENSLBEG00000008088	smarcad1a	99	61.504	ENSHCOG00000007848	smarcad1a	67	76.662	Hippocampus_comes
ENSLBEG00000008088	smarcad1a	99	57.169	ENSIPUG00000000242	smarcad1a	96	60.537	Ictalurus_punctatus
ENSLBEG00000008088	smarcad1a	72	74.194	ENSIPUG00000022817	smarcad1b	83	72.945	Ictalurus_punctatus
ENSLBEG00000008088	smarcad1a	63	65.373	ENSSTOG00000001227	SMARCAD1	65	65.373	Ictidomys_tridecemlineatus
ENSLBEG00000008088	smarcad1a	69	62.158	ENSJJAG00000022342	Smarcad1	65	65.821	Jaculus_jaculus
ENSLBEG00000008088	smarcad1a	99	73.485	ENSKMAG00000021351	smarcad1a	99	73.175	Kryptolebias_marmoratus
ENSLBEG00000008088	smarcad1a	85	75.000	ENSLOCG00000012909	smarcad1a	98	71.571	Lepisosteus_oculatus
ENSLBEG00000008088	smarcad1a	90	64.328	ENSLAFG00000000040	SMARCAD1	79	64.328	Loxodonta_africana
ENSLBEG00000008088	smarcad1a	79	65.821	ENSMFAG00000042606	SMARCAD1	91	65.821	Macaca_fascicularis
ENSLBEG00000008088	smarcad1a	79	65.821	ENSMMUG00000022242	SMARCAD1	91	65.821	Macaca_mulatta
ENSLBEG00000008088	smarcad1a	63	65.821	ENSMNEG00000038117	SMARCAD1	99	67.845	Macaca_nemestrina
ENSLBEG00000008088	smarcad1a	63	65.821	ENSMLEG00000038333	SMARCAD1	99	67.845	Mandrillus_leucophaeus
ENSLBEG00000008088	smarcad1a	99	78.782	ENSMAMG00000000933	smarcad1a	100	78.571	Mastacembelus_armatus
ENSLBEG00000008088	smarcad1a	99	72.864	ENSMZEG00005005203	smarcad1a	100	73.062	Maylandia_zebra
ENSLBEG00000008088	smarcad1a	79	66.667	ENSMGAG00000005577	SMARCAD1	81	66.667	Meleagris_gallopavo
ENSLBEG00000008088	smarcad1a	90	65.672	ENSMAUG00000008417	Smarcad1	94	65.672	Mesocricetus_auratus
ENSLBEG00000008088	smarcad1a	63	65.774	ENSMICG00000009746	SMARCAD1	65	65.774	Microcebus_murinus
ENSLBEG00000008088	smarcad1a	98	61.769	ENSMOCG00000017142	Smarcad1	97	64.040	Microtus_ochrogaster
ENSLBEG00000008088	smarcad1a	72	83.163	ENSMMOG00000000275	smarcad1a	100	83.163	Mola_mola
ENSLBEG00000008088	smarcad1a	82	64.040	MGP_CAROLIEiJ_G0028458	-	63	65.672	Mus_caroli
ENSLBEG00000008088	smarcad1a	94	64.040	ENSMUSG00000029920	Smarcad1	97	64.040	Mus_musculus
ENSLBEG00000008088	smarcad1a	94	64.040	MGP_PahariEiJ_G0022198	Smarcad1	97	64.040	Mus_pahari
ENSLBEG00000008088	smarcad1a	94	64.040	MGP_SPRETEiJ_G0029462	Smarcad1	97	64.040	Mus_spretus
ENSLBEG00000008088	smarcad1a	63	65.821	ENSMPUG00000002111	SMARCAD1	65	65.821	Mustela_putorius_furo
ENSLBEG00000008088	smarcad1a	64	64.412	ENSMLUG00000000425	SMARCAD1	65	64.412	Myotis_lucifugus
ENSLBEG00000008088	smarcad1a	90	64.925	ENSNGAG00000000810	Smarcad1	94	64.925	Nannospalax_galili
ENSLBEG00000008088	smarcad1a	73	79.618	ENSNBRG00000012749	smarcad1a	88	84.060	Neolamprologus_brichardi
ENSLBEG00000008088	smarcad1a	63	65.821	ENSNLEG00000014225	SMARCAD1	99	67.845	Nomascus_leucogenys
ENSLBEG00000008088	smarcad1a	94	64.183	ENSODEG00000004334	SMARCAD1	79	66.119	Octodon_degus
ENSLBEG00000008088	smarcad1a	84	86.115	ENSONIG00000015059	smarcad1a	97	81.924	Oreochromis_niloticus
ENSLBEG00000008088	smarcad1a	71	68.585	ENSOANG00000013764	SMARCAD1	92	66.519	Ornithorhynchus_anatinus
ENSLBEG00000008088	smarcad1a	63	65.522	ENSOCUG00000017283	SMARCAD1	65	65.522	Oryctolagus_cuniculus
ENSLBEG00000008088	smarcad1a	99	69.065	ENSORLG00000004869	smarcad1a	100	68.075	Oryzias_latipes
ENSLBEG00000008088	smarcad1a	99	68.972	ENSORLG00020020569	smarcad1a	100	67.981	Oryzias_latipes_hni
ENSLBEG00000008088	smarcad1a	99	68.972	ENSORLG00015009045	smarcad1a	100	67.981	Oryzias_latipes_hsok
ENSLBEG00000008088	smarcad1a	99	68.307	ENSOMEG00000023032	smarcad1a	99	68.113	Oryzias_melastigma
ENSLBEG00000008088	smarcad1a	63	65.179	ENSOGAG00000011444	SMARCAD1	65	65.179	Otolemur_garnettii
ENSLBEG00000008088	smarcad1a	63	65.672	ENSOARG00000017851	SMARCAD1	65	65.672	Ovis_aries
ENSLBEG00000008088	smarcad1a	63	65.821	ENSPPAG00000035715	SMARCAD1	65	65.821	Pan_paniscus
ENSLBEG00000008088	smarcad1a	63	65.970	ENSPPRG00000024756	SMARCAD1	99	68.013	Panthera_pardus
ENSLBEG00000008088	smarcad1a	63	65.774	ENSPTIG00000017868	SMARCAD1	65	65.774	Panthera_tigris_altaica
ENSLBEG00000008088	smarcad1a	63	65.821	ENSPTRG00000023126	SMARCAD1	99	67.845	Pan_troglodytes
ENSLBEG00000008088	smarcad1a	63	64.339	ENSPANG00000019757	SMARCAD1	65	64.339	Papio_anubis
ENSLBEG00000008088	smarcad1a	65	63.932	ENSPSIG00000010255	SMARCAD1	68	63.932	Pelodiscus_sinensis
ENSLBEG00000008088	smarcad1a	61	76.733	ENSPMGG00000010735	smarcad1a	97	75.367	Periophthalmus_magnuspinnatus
ENSLBEG00000008088	smarcad1a	94	55.683	ENSPEMG00000001854	Smarcad1	97	55.683	Peromyscus_maniculatus_bairdii
ENSLBEG00000008088	smarcad1a	95	55.289	ENSPMAG00000003516	smarcad1a	96	55.289	Petromyzon_marinus
ENSLBEG00000008088	smarcad1a	78	63.302	ENSPCIG00000008137	SMARCAD1	90	67.313	Phascolarctos_cinereus
ENSLBEG00000008088	smarcad1a	99	68.178	ENSPFOG00000019116	smarcad1a	100	66.423	Poecilia_formosa
ENSLBEG00000008088	smarcad1a	99	68.087	ENSPLAG00000000108	smarcad1a	100	66.332	Poecilia_latipinna
ENSLBEG00000008088	smarcad1a	99	68.178	ENSPMEG00000009155	smarcad1a	100	66.423	Poecilia_mexicana
ENSLBEG00000008088	smarcad1a	99	71.119	ENSPREG00000018185	smarcad1a	100	70.544	Poecilia_reticulata
ENSLBEG00000008088	smarcad1a	90	65.327	ENSPPYG00000014935	SMARCAD1	65	65.327	Pongo_abelii
ENSLBEG00000008088	smarcad1a	63	56.418	ENSPCOG00000020478	SMARCAD1	74	56.418	Propithecus_coquereli
ENSLBEG00000008088	smarcad1a	63	65.022	ENSPVAG00000001760	SMARCAD1	65	65.022	Pteropus_vampyrus
ENSLBEG00000008088	smarcad1a	75	78.807	ENSPNYG00000010087	smarcad1a	88	82.740	Pundamilia_nyererei
ENSLBEG00000008088	smarcad1a	76	71.387	ENSPNAG00000010099	smarcad1b	86	71.866	Pygocentrus_nattereri
ENSLBEG00000008088	smarcad1a	99	58.863	ENSPNAG00000001663	smarcad1a	100	57.915	Pygocentrus_nattereri
ENSLBEG00000008088	smarcad1a	90	64.040	ENSRNOG00000006391	Smarcad1	97	64.040	Rattus_norvegicus
ENSLBEG00000008088	smarcad1a	63	65.821	ENSRBIG00000041989	SMARCAD1	65	65.821	Rhinopithecus_bieti
ENSLBEG00000008088	smarcad1a	63	65.821	ENSRROG00000035309	SMARCAD1	65	65.821	Rhinopithecus_roxellana
ENSLBEG00000008088	smarcad1a	89	65.970	ENSSBOG00000032114	SMARCAD1	99	68.013	Saimiri_boliviensis_boliviensis
ENSLBEG00000008088	smarcad1a	89	66.866	ENSSHAG00000001279	SMARCAD1	81	66.866	Sarcophilus_harrisii
ENSLBEG00000008088	smarcad1a	67	71.369	ENSSFOG00015020909	smarcad1a	91	73.440	Scleropages_formosus
ENSLBEG00000008088	smarcad1a	99	78.180	ENSSMAG00000001326	smarcad1a	100	78.552	Scophthalmus_maximus
ENSLBEG00000008088	smarcad1a	75	83.396	ENSSDUG00000022338	smarcad1a	88	87.381	Seriola_dumerili
ENSLBEG00000008088	smarcad1a	99	75.442	ENSSLDG00000024986	smarcad1a	100	76.866	Seriola_lalandi_dorsalis
ENSLBEG00000008088	smarcad1a	56	69.580	ENSSPUG00000004633	SMARCAD1	99	69.580	Sphenodon_punctatus
ENSLBEG00000008088	smarcad1a	99	77.031	ENSSPAG00000001970	smarcad1a	100	77.622	Stegastes_partitus
ENSLBEG00000008088	smarcad1a	74	65.821	ENSSSCG00000009193	SMARCAD1	93	65.821	Sus_scrofa
ENSLBEG00000008088	smarcad1a	75	61.885	ENSTGUG00000003127	SMARCAD1	98	64.407	Taeniopygia_guttata
ENSLBEG00000008088	smarcad1a	84	83.473	ENSTNIG00000017585	smarcad1a	98	84.571	Tetraodon_nigroviridis
ENSLBEG00000008088	smarcad1a	77	70.040	ENSTBEG00000002789	SMARCAD1	64	70.040	Tupaia_belangeri
ENSLBEG00000008088	smarcad1a	76	65.425	ENSTTRG00000000226	SMARCAD1	81	65.425	Tursiops_truncatus
ENSLBEG00000008088	smarcad1a	63	65.821	ENSUAMG00000022262	SMARCAD1	70	66.104	Ursus_americanus
ENSLBEG00000008088	smarcad1a	63	65.821	ENSUMAG00000004549	SMARCAD1	65	65.821	Ursus_maritimus
ENSLBEG00000008088	smarcad1a	80	62.865	ENSVVUG00000007271	SMARCAD1	93	65.821	Vulpes_vulpes
ENSLBEG00000008088	smarcad1a	84	58.207	ENSXETG00000019214	smarcad1	94	59.856	Xenopus_tropicalis
ENSLBEG00000008088	smarcad1a	84	78.895	ENSXCOG00000005232	smarcad1a	92	81.037	Xiphophorus_couchianus
ENSLBEG00000008088	smarcad1a	99	67.452	ENSXMAG00000015350	smarcad1a	64	81.402	Xiphophorus_maculatus