EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000008353 (Gene tree)
Gene ID: 109994137
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC109994137
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 916 bases
Position: chrFKLU01000280.1:420375-421290
Accession: 109994137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000010792	zf-CCCH	PF00642.24	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000011371	-	804	XM_020647321	ENSLBEP00000010792	267 (aa)	XP_020502977	UPI0009B37ADF

Gene Model

Click here to download ENSLBEG00000008353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000008353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000008353	si:ch211-113e8.11	100	62.172	ENSAPOG00000010990	si:ch211-113e8.11	100	64.045	Acanthochromis_polyacanthus
ENSLBEG00000008353	si:ch211-113e8.11	55	65.541	ENSACIG00000011566	si:ch211-113e8.11	79	65.605	Amphilophus_citrinellus
ENSLBEG00000008353	si:ch211-113e8.11	100	64.552	ENSAOCG00000022156	si:ch211-113e8.11	100	59.783	Amphiprion_ocellaris
ENSLBEG00000008353	si:ch211-113e8.11	100	64.179	ENSAPEG00000018284	si:ch211-113e8.11	100	59.420	Amphiprion_percula
ENSLBEG00000008353	si:ch211-113e8.11	100	63.941	ENSATEG00000018391	si:ch211-113e8.11	100	61.798	Anabas_testudineus
ENSLBEG00000008353	si:ch211-113e8.11	100	54.682	ENSACLG00000017011	si:ch211-113e8.11	100	55.970	Astatotilapia_calliptera
ENSLBEG00000008353	si:ch211-113e8.11	97	42.754	ENSAMXG00000000733	si:ch211-113e8.11	97	43.956	Astyanax_mexicanus
ENSLBEG00000008353	si:ch211-113e8.11	99	59.851	ENSCSEG00000004538	si:ch211-113e8.11	99	56.343	Cynoglossus_semilaevis
ENSLBEG00000008353	si:ch211-113e8.11	100	50.187	ENSCVAG00000020156	si:ch211-113e8.11	99	49.064	Cyprinodon_variegatus
ENSLBEG00000008353	si:ch211-113e8.11	97	41.132	ENSDARG00000076585	si:ch211-113e8.11	99	42.146	Danio_rerio
ENSLBEG00000008353	si:ch211-113e8.11	100	49.815	ENSELUG00000001130	si:ch211-113e8.11	100	49.815	Esox_lucius
ENSLBEG00000008353	si:ch211-113e8.11	100	50.562	ENSFHEG00000007870	si:ch211-113e8.11	99	48.315	Fundulus_heteroclitus
ENSLBEG00000008353	si:ch211-113e8.11	100	56.929	ENSGAFG00000020570	si:ch211-113e8.11	100	56.180	Gambusia_affinis
ENSLBEG00000008353	si:ch211-113e8.11	100	55.805	ENSHBUG00000003552	si:ch211-113e8.11	100	55.970	Haplochromis_burtoni
ENSLBEG00000008353	si:ch211-113e8.11	99	52.060	ENSHCOG00000002041	si:ch211-113e8.11	99	50.000	Hippocampus_comes
ENSLBEG00000008353	si:ch211-113e8.11	58	52.795	ENSIPUG00000002260	si:ch211-113e8.11	94	43.130	Ictalurus_punctatus
ENSLBEG00000008353	si:ch211-113e8.11	100	58.736	ENSKMAG00000000086	si:ch211-113e8.11	99	57.090	Kryptolebias_marmoratus
ENSLBEG00000008353	si:ch211-113e8.11	60	40.123	ENSLACG00000004304	si:ch211-113e8.11	77	42.857	Latimeria_chalumnae
ENSLBEG00000008353	si:ch211-113e8.11	89	63.445	ENSMAMG00000019098	si:ch211-113e8.11	92	63.445	Mastacembelus_armatus
ENSLBEG00000008353	si:ch211-113e8.11	100	53.558	ENSMZEG00005023658	si:ch211-113e8.11	100	54.851	Maylandia_zebra
ENSLBEG00000008353	si:ch211-113e8.11	64	73.837	ENSMMOG00000007254	si:ch211-113e8.11	78	73.837	Mola_mola
ENSLBEG00000008353	si:ch211-113e8.11	100	60.595	ENSMALG00000005110	si:ch211-113e8.11	100	59.551	Monopterus_albus
ENSLBEG00000008353	si:ch211-113e8.11	100	53.933	ENSNBRG00000015060	si:ch211-113e8.11	100	55.224	Neolamprologus_brichardi
ENSLBEG00000008353	si:ch211-113e8.11	100	52.060	ENSORLG00000023699	si:ch211-113e8.11	100	49.438	Oryzias_latipes
ENSLBEG00000008353	si:ch211-113e8.11	100	51.685	ENSORLG00020022094	si:ch211-113e8.11	100	49.064	Oryzias_latipes_hni
ENSLBEG00000008353	si:ch211-113e8.11	100	52.434	ENSORLG00015002588	si:ch211-113e8.11	100	50.187	Oryzias_latipes_hsok
ENSLBEG00000008353	si:ch211-113e8.11	100	52.060	ENSOMEG00000010624	si:ch211-113e8.11	100	50.187	Oryzias_melastigma
ENSLBEG00000008353	si:ch211-113e8.11	54	51.370	ENSPKIG00000023576	si:ch211-113e8.11	96	40.672	Paramormyrops_kingsleyae
ENSLBEG00000008353	si:ch211-113e8.11	97	50.775	ENSPMGG00000018547	si:ch211-113e8.11	98	49.237	Periophthalmus_magnuspinnatus
ENSLBEG00000008353	si:ch211-113e8.11	98	57.471	ENSPFOG00000007950	si:ch211-113e8.11	100	54.406	Poecilia_formosa
ENSLBEG00000008353	si:ch211-113e8.11	100	58.052	ENSPLAG00000002081	si:ch211-113e8.11	100	55.056	Poecilia_latipinna
ENSLBEG00000008353	si:ch211-113e8.11	100	58.427	ENSPMEG00000017505	si:ch211-113e8.11	100	55.431	Poecilia_mexicana
ENSLBEG00000008353	si:ch211-113e8.11	100	55.431	ENSPREG00000008530	si:ch211-113e8.11	100	53.558	Poecilia_reticulata
ENSLBEG00000008353	si:ch211-113e8.11	100	53.933	ENSPNYG00000022856	si:ch211-113e8.11	100	55.224	Pundamilia_nyererei
ENSLBEG00000008353	si:ch211-113e8.11	98	39.630	ENSPNAG00000013782	si:ch211-113e8.11	99	39.259	Pygocentrus_nattereri
ENSLBEG00000008353	si:ch211-113e8.11	59	48.734	ENSSFOG00015000959	si:ch211-113e8.11	95	38.697	Scleropages_formosus
ENSLBEG00000008353	si:ch211-113e8.11	100	59.328	ENSSMAG00000009732	si:ch211-113e8.11	100	59.701	Scophthalmus_maximus
ENSLBEG00000008353	si:ch211-113e8.11	100	67.286	ENSSDUG00000000112	si:ch211-113e8.11	100	65.672	Seriola_dumerili
ENSLBEG00000008353	si:ch211-113e8.11	100	66.171	ENSSLDG00000003287	si:ch211-113e8.11	100	64.552	Seriola_lalandi_dorsalis
ENSLBEG00000008353	si:ch211-113e8.11	100	64.419	ENSSPAG00000001375	si:ch211-113e8.11	100	64.419	Stegastes_partitus
ENSLBEG00000008353	si:ch211-113e8.11	99	55.019	ENSTRUG00000023898	si:ch211-113e8.11	99	50.370	Takifugu_rubripes
ENSLBEG00000008353	si:ch211-113e8.11	100	57.678	ENSXMAG00000024104	si:ch211-113e8.11	100	55.056	Xiphophorus_maculatus