EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000008569 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3574 bases
Position: chrFKLU01006331.1:5956-9529
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000011131	RVT_1	PF00078.27	2.1e-38	1	1
ENSLBEP00000011131	Exo_endo_phos	PF03372.23	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000011712	-	3574	-	ENSLBEP00000011131	1027 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000008569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000008569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000008569	-	61	48.567	ENSLBEG00000013480	-	67	48.726
ENSLBEG00000008569	-	64	99.848	ENSLBEG00000009538	-	69	99.848
ENSLBEG00000008569	-	100	98.442	ENSLBEG00000007872	-	78	98.442
ENSLBEG00000008569	-	64	99.848	ENSLBEG00000011022	-	72	99.848
ENSLBEG00000008569	-	64	100.000	ENSLBEG00000015201	-	69	100.000
ENSLBEG00000008569	-	100	100.000	ENSLBEG00000008483	-	78	100.000
ENSLBEG00000008569	-	90	43.362	ENSLBEG00000029018	-	81	43.469
ENSLBEG00000008569	-	75	45.876	ENSLBEG00000011646	-	81	46.005
ENSLBEG00000008569	-	100	99.903	ENSLBEG00000007968	-	78	99.903
ENSLBEG00000008569	-	55	49.037	ENSLBEG00000029028	-	61	50.088
ENSLBEG00000008569	-	75	44.673	ENSLBEG00000008622	-	78	44.801
ENSLBEG00000008569	-	64	100.000	ENSLBEG00000016824	-	69	100.000
ENSLBEG00000008569	-	64	100.000	ENSLBEG00000014347	-	69	100.000
ENSLBEG00000008569	-	100	100.000	ENSLBEG00000012182	-	78	100.000
ENSLBEG00000008569	-	76	98.842	ENSLBEG00000022930	-	94	98.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000008569	-	98	44.411	ENSATEG00000021554	-	77	44.411	Anabas_testudineus
ENSLBEG00000008569	-	99	49.312	ENSAMXG00000037575	-	94	49.263	Astyanax_mexicanus
ENSLBEG00000008569	-	98	41.298	ENSDARG00000105157	BX649434.3	76	41.298	Danio_rerio
ENSLBEG00000008569	-	99	50.197	ENSDARG00000100303	CU638714.1	76	50.197	Danio_rerio
ENSLBEG00000008569	-	97	43.270	ENSDARG00000098779	BX547930.4	78	43.052	Danio_rerio
ENSLBEG00000008569	-	99	44.574	ENSDARG00000101795	CABZ01033394.1	77	44.574	Danio_rerio
ENSLBEG00000008569	-	97	40.936	ENSGMOG00000001470	-	77	41.036	Gadus_morhua
ENSLBEG00000008569	-	98	42.224	ENSGACG00000000122	-	76	42.266	Gasterosteus_aculeatus
ENSLBEG00000008569	-	86	43.883	ENSKMAG00000017599	-	100	43.883	Kryptolebias_marmoratus
ENSLBEG00000008569	-	91	30.650	ENSORLG00000024361	-	70	31.126	Oryzias_latipes
ENSLBEG00000008569	-	88	30.374	ENSORLG00000024817	-	93	30.795	Oryzias_latipes
ENSLBEG00000008569	-	96	56.609	ENSORLG00000024845	-	76	55.731	Oryzias_latipes
ENSLBEG00000008569	-	78	44.444	ENSORLG00000024114	-	72	44.444	Oryzias_latipes
ENSLBEG00000008569	-	91	30.444	ENSORLG00000022718	-	70	30.905	Oryzias_latipes
ENSLBEG00000008569	-	91	30.444	ENSORLG00000021884	-	70	30.905	Oryzias_latipes
ENSLBEG00000008569	-	97	56.814	ENSORLG00020022348	-	76	56.170	Oryzias_latipes_hni
ENSLBEG00000008569	-	91	30.303	ENSORLG00015014452	-	75	30.303	Oryzias_latipes_hsok
ENSLBEG00000008569	-	91	30.031	ENSORLG00015019816	-	70	30.464	Oryzias_latipes_hsok
ENSLBEG00000008569	-	91	30.341	ENSORLG00015019437	-	89	30.795	Oryzias_latipes_hsok
ENSLBEG00000008569	-	100	53.307	ENSOMEG00000013951	-	78	53.307	Oryzias_melastigma
ENSLBEG00000008569	-	99	42.968	ENSSDUG00000006191	-	78	42.968	Seriola_dumerili
ENSLBEG00000008569	-	93	42.231	ENSXMAG00000024932	-	72	42.231	Xiphophorus_maculatus
ENSLBEG00000008569	-	97	42.757	ENSXMAG00000028545	-	77	42.757	Xiphophorus_maculatus
ENSLBEG00000008569	-	98	42.730	ENSXMAG00000028372	-	78	42.730	Xiphophorus_maculatus
ENSLBEG00000008569	-	93	42.336	ENSXMAG00000025449	-	72	42.336	Xiphophorus_maculatus