EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000008622 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4036 bases
Position: chrFKLU01001827.1:23324-27359
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000011211	RVT_1	PF00078.27	5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000011796	-	4036	-	ENSLBEP00000011211	988 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000008622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000008622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000008622	-	78	44.801	ENSLBEG00000008569	-	75	44.673
ENSLBEG00000008622	-	83	42.754	ENSLBEG00000014347	-	86	42.635
ENSLBEG00000008622	-	99	41.247	ENSLBEG00000012182	-	74	41.407
ENSLBEG00000008622	-	83	42.754	ENSLBEG00000011022	-	90	42.754
ENSLBEG00000008622	-	99	41.247	ENSLBEG00000008483	-	74	41.407
ENSLBEG00000008622	-	99	41.247	ENSLBEG00000007968	-	74	41.407
ENSLBEG00000008622	-	93	54.853	ENSLBEG00000011646	-	96	54.853
ENSLBEG00000008622	-	81	54.670	ENSLBEG00000013480	-	86	54.670
ENSLBEG00000008622	-	83	42.635	ENSLBEG00000009538	-	86	42.515
ENSLBEG00000008622	-	83	42.754	ENSLBEG00000016824	-	86	42.635
ENSLBEG00000008622	-	83	42.754	ENSLBEG00000015201	-	86	42.635
ENSLBEG00000008622	-	100	99.191	ENSLBEG00000029018	-	86	99.191
ENSLBEG00000008622	-	59	43.151	ENSLBEG00000022930	-	71	43.151
ENSLBEG00000008622	-	75	55.526	ENSLBEG00000029028	-	79	55.541
ENSLBEG00000008622	-	99	41.247	ENSLBEG00000007872	-	74	41.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000008622	-	99	57.432	ENSATEG00000021554	-	75	57.432	Anabas_testudineus
ENSLBEG00000008622	-	88	42.497	ENSAMXG00000037575	-	80	42.644	Astyanax_mexicanus
ENSLBEG00000008622	-	99	48.231	ENSDARG00000098779	BX547930.4	75	48.182	Danio_rerio
ENSLBEG00000008622	-	99	53.994	ENSDARG00000101795	CABZ01033394.1	75	53.994	Danio_rerio
ENSLBEG00000008622	-	59	30.626	ENSDARG00000098557	BX323564.1	60	30.626	Danio_rerio
ENSLBEG00000008622	-	99	50.252	ENSDARG00000105157	BX649434.3	75	50.252	Danio_rerio
ENSLBEG00000008622	-	98	40.748	ENSDARG00000100303	CU638714.1	74	40.748	Danio_rerio
ENSLBEG00000008622	-	99	54.934	ENSGMOG00000001470	-	75	54.629	Gadus_morhua
ENSLBEG00000008622	-	99	58.638	ENSGACG00000000122	-	74	58.638	Gasterosteus_aculeatus
ENSLBEG00000008622	-	50	74.542	ENSKMAG00000007124	-	100	74.542	Kryptolebias_marmoratus
ENSLBEG00000008622	-	68	72.485	ENSKMAG00000017599	-	76	72.485	Kryptolebias_marmoratus
ENSLBEG00000008622	-	99	41.296	ENSORLG00000024845	-	74	41.296	Oryzias_latipes
ENSLBEG00000008622	-	99	65.717	ENSORLG00000024114	-	88	65.717	Oryzias_latipes
ENSLBEG00000008622	-	99	40.992	ENSORLG00020022348	-	74	40.992	Oryzias_latipes_hni
ENSLBEG00000008622	-	99	38.872	ENSOMEG00000013951	-	74	38.872	Oryzias_melastigma
ENSLBEG00000008622	-	99	51.923	ENSSDUG00000006191	-	75	52.227	Seriola_dumerili
ENSLBEG00000008622	-	99	65.412	ENSXMAG00000024932	-	74	65.412	Xiphophorus_maculatus
ENSLBEG00000008622	-	99	66.836	ENSXMAG00000028545	-	76	66.836	Xiphophorus_maculatus
ENSLBEG00000008622	-	99	50.811	ENSXMAG00000028372	-	76	50.811	Xiphophorus_maculatus
ENSLBEG00000008622	-	99	65.412	ENSXMAG00000025449	-	74	65.412	Xiphophorus_maculatus