EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000008746 (Gene tree)
Gene ID: 109985442
Gene Symbol: RAB41
Alias: -
Full Name: ras-related protein Rab-6A-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 10333 bases
Position: chrFKLU01000082.1:1006744-1017076
Accession: 109985442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000011393	MMR_HSR1	PF01926.23	8.2e-05	1	1
ENSLBEP00000011358	MMR_HSR1	PF01926.23	0.00011	1	1
ENSLBEP00000011378	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000011984	RAB41-203	3650	XM_020635780	ENSLBEP00000011393	211 (aa)	XP_020491436	UPI0003942480
ENSLBET00000011949	RAB41-201	4298	XM_020635779	ENSLBEP00000011358	211 (aa)	XP_020491435	UPI0000E3E362
ENSLBET00000011968	RAB41-202	4298	XM_020635778	ENSLBEP00000011378	211 (aa)	XP_020491434	UPI00022AFD3B

Gene Model

Click here to download ENSLBEG00000008746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000008746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000008746	RAB41	92	35.238	ENSLBEG00000026790	-	95	35.238
ENSLBEG00000008746	RAB41	90	39.791	ENSLBEG00000027539	-	86	39.791
ENSLBEG00000008746	RAB41	98	86.957	ENSLBEG00000019372	rab6bb	99	86.957
ENSLBEG00000008746	RAB41	85	33.333	ENSLBEG00000006087	rab11ba	87	33.333
ENSLBEG00000008746	RAB41	74	36.943	ENSLBEG00000026857	rab11a	73	36.943
ENSLBEG00000008746	RAB41	55	32.773	ENSLBEG00000011152	arl4d	59	32.773
ENSLBEG00000008746	RAB41	83	36.364	ENSLBEG00000011478	rab9b	84	36.364
ENSLBEG00000008746	RAB41	74	35.669	ENSLBEG00000005981	-	70	35.669
ENSLBEG00000008746	RAB41	91	38.071	ENSLBEG00000020796	rab2a	90	38.071
ENSLBEG00000008746	RAB41	72	33.333	ENSLBEG00000016218	rasl11a	62	32.919
ENSLBEG00000008746	RAB41	73	39.490	ENSLBEG00000001193	rab42a	72	39.490
ENSLBEG00000008746	RAB41	79	39.766	ENSLBEG00000019428	rab18b	83	39.766
ENSLBEG00000008746	RAB41	75	36.471	ENSLBEG00000020582	rab9a	83	36.471
ENSLBEG00000008746	RAB41	92	35.961	ENSLBEG00000026989	RAB15	96	35.961
ENSLBEG00000008746	RAB41	78	39.394	ENSLBEG00000003235	rab22a	85	39.394
ENSLBEG00000008746	RAB41	92	38.000	ENSLBEG00000021040	rab1ba	96	38.000
ENSLBEG00000008746	RAB41	75	43.671	ENSLBEG00000026779	rab13	79	43.671
ENSLBEG00000008746	RAB41	77	40.237	ENSLBEG00000026777	rab33ba	73	40.237
ENSLBEG00000008746	RAB41	74	37.580	ENSLBEG00000004172	-	72	37.580
ENSLBEG00000008746	RAB41	70	42.953	ENSLBEG00000025798	zgc:101559	64	42.953
ENSLBEG00000008746	RAB41	74	32.716	ENSLBEG00000027628	si:cabz01085950.1	79	32.716
ENSLBEG00000008746	RAB41	94	34.135	ENSLBEG00000022630	-	98	34.135
ENSLBEG00000008746	RAB41	98	89.372	ENSLBEG00000003748	rab6a	99	89.372
ENSLBEG00000008746	RAB41	74	37.580	ENSLBEG00000015248	rab11bb	72	37.580
ENSLBEG00000008746	RAB41	99	36.916	ENSLBEG00000014427	rab33a	89	37.931
ENSLBEG00000008746	RAB41	83	38.286	ENSLBEG00000003101	rab4a	82	38.286
ENSLBEG00000008746	RAB41	82	43.678	ENSLBEG00000004128	rab5c	79	43.678
ENSLBEG00000008746	RAB41	75	38.415	ENSLBEG00000027691	RAB17	70	38.415
ENSLBEG00000008746	RAB41	82	38.333	ENSLBEG00000005791	-	84	38.333
ENSLBEG00000008746	RAB41	82	32.759	ENSLBEG00000019137	rhebl1	89	32.759
ENSLBEG00000008746	RAB41	99	38.942	ENSLBEG00000010408	-	95	38.942
ENSLBEG00000008746	RAB41	82	38.333	ENSLBEG00000027226	-	77	38.333
ENSLBEG00000008746	RAB41	76	36.646	ENSLBEG00000002367	rab25a	76	36.646
ENSLBEG00000008746	RAB41	70	40.909	ENSLBEG00000018063	-	65	40.764
ENSLBEG00000008746	RAB41	73	40.909	ENSLBEG00000007681	si:dkey-16l2.16	73	40.909
ENSLBEG00000008746	RAB41	92	37.000	ENSLBEG00000017798	-	96	37.000
ENSLBEG00000008746	RAB41	75	38.750	ENSLBEG00000013756	rab12	78	36.649
ENSLBEG00000008746	RAB41	90	32.995	ENSLBEG00000005128	-	87	32.995
ENSLBEG00000008746	RAB41	75	37.888	ENSLBEG00000026006	rab34a	61	37.888
ENSLBEG00000008746	RAB41	92	34.171	ENSLBEG00000018180	si:dkey-13a21.4	96	34.171
ENSLBEG00000008746	RAB41	69	39.726	ENSLBEG00000013176	rab23	74	40.132
ENSLBEG00000008746	RAB41	79	39.181	ENSLBEG00000005861	rab18a	80	39.181
ENSLBEG00000008746	RAB41	77	43.275	ENSLBEG00000002926	si:dkey-34d22.5	77	43.275
ENSLBEG00000008746	RAB41	74	30.769	ENSLBEG00000003644	rabl2	68	30.769
ENSLBEG00000008746	RAB41	75	44.304	ENSLBEG00000013463	rab15	74	44.304
ENSLBEG00000008746	RAB41	81	34.884	ENSLBEG00000014885	rheb	93	34.884
ENSLBEG00000008746	RAB41	94	40.686	ENSLBEG00000002516	rab5aa	89	40.686
ENSLBEG00000008746	RAB41	76	31.481	ENSLBEG00000025705	si:ch73-116o1.2	77	31.481
ENSLBEG00000008746	RAB41	85	33.871	ENSLBEG00000006152	-	90	33.871
ENSLBEG00000008746	RAB41	92	39.801	ENSLBEG00000027781	rab1ab	96	39.801
ENSLBEG00000008746	RAB41	74	38.994	ENSLBEG00000001313	RAB39B	75	38.994
ENSLBEG00000008746	RAB41	78	36.585	ENSLBEG00000016417	rab11al	77	36.585
ENSLBEG00000008746	RAB41	73	33.974	ENSLBEG00000003132	rras	77	33.974
ENSLBEG00000008746	RAB41	74	33.544	ENSLBEG00000001905	hrasb	83	33.544
ENSLBEG00000008746	RAB41	74	32.911	ENSLBEG00000028450	kras	83	32.911
ENSLBEG00000008746	RAB41	75	40.506	ENSLBEG00000019435	rab14	73	40.506
ENSLBEG00000008746	RAB41	85	33.871	ENSLBEG00000018812	RAB29	90	33.871
ENSLBEG00000008746	RAB41	92	32.821	ENSLBEG00000016446	rab25b	94	32.821
ENSLBEG00000008746	RAB41	97	90.244	ENSLBEG00000026930	rab6ba	99	90.244
ENSLBEG00000008746	RAB41	75	37.888	ENSLBEG00000027819	rab34b	73	37.671
ENSLBEG00000008746	RAB41	92	36.500	ENSLBEG00000001796	RAB7A	96	36.500
ENSLBEG00000008746	RAB41	73	39.610	ENSLBEG00000001618	rab35b	76	39.610
ENSLBEG00000008746	RAB41	91	37.688	ENSLBEG00000028426	RAB1A	96	37.688
ENSLBEG00000008746	RAB41	92	33.333	ENSLBEG00000005018	rab32b	94	33.333
ENSLBEG00000008746	RAB41	76	44.099	ENSLBEG00000001146	rab30	79	44.099
ENSLBEG00000008746	RAB41	82	34.682	ENSLBEG00000000119	rras2	83	35.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000008746	RAB41	100	100.000	ENSACIG00000010914	RAB41	100	100.000	Amphilophus_citrinellus
ENSLBEG00000008746	RAB41	100	100.000	ENSAOCG00000022426	RAB41	100	100.000	Amphiprion_ocellaris
ENSLBEG00000008746	RAB41	100	98.104	ENSAPEG00000007931	RAB41	100	98.104	Amphiprion_percula
ENSLBEG00000008746	RAB41	94	70.707	ENSTSYG00000000768	RAB41	87	70.707	Carlito_syrichta
ENSLBEG00000008746	RAB41	93	67.005	ENSCATG00000037380	RAB41	87	67.005	Cercocebus_atys
ENSLBEG00000008746	RAB41	100	96.209	ENSCPBG00000014340	RAB41	100	96.209	Chrysemys_picta_bellii
ENSLBEG00000008746	RAB41	100	100.000	ENSFHEG00000015996	RAB41	100	100.000	Fundulus_heteroclitus
ENSLBEG00000008746	RAB41	100	100.000	ENSHBUG00000014338	RAB41	100	100.000	Haplochromis_burtoni
ENSLBEG00000008746	RAB41	93	68.528	ENSMFAG00000000762	RAB41	87	68.528	Macaca_fascicularis
ENSLBEG00000008746	RAB41	93	68.528	ENSMMUG00000013937	RAB41	87	68.528	Macaca_mulatta
ENSLBEG00000008746	RAB41	93	68.020	ENSMNEG00000045569	RAB41	87	68.020	Macaca_nemestrina
ENSLBEG00000008746	RAB41	91	67.358	ENSMLEG00000038149	RAB41	86	67.358	Mandrillus_leucophaeus
ENSLBEG00000008746	RAB41	100	99.528	ENSONIG00000002774	RAB41	100	99.528	Oreochromis_niloticus
ENSLBEG00000008746	RAB41	100	99.052	ENSORLG00000027669	RAB41	100	99.052	Oryzias_latipes
ENSLBEG00000008746	RAB41	100	97.156	ENSORLG00015010161	RAB41	100	97.156	Oryzias_latipes_hsok
ENSLBEG00000008746	RAB41	100	99.052	ENSOMEG00000017258	RAB41	100	99.052	Oryzias_melastigma
ENSLBEG00000008746	RAB41	93	68.020	ENSPANG00000007317	RAB41	87	68.020	Papio_anubis
ENSLBEG00000008746	RAB41	99	96.651	ENSPKIG00000014618	-	99	96.651	Paramormyrops_kingsleyae
ENSLBEG00000008746	RAB41	100	100.000	ENSPMGG00000017830	RAB41	100	100.000	Periophthalmus_magnuspinnatus
ENSLBEG00000008746	RAB41	100	100.000	ENSPFOG00000011424	RAB41	100	100.000	Poecilia_formosa
ENSLBEG00000008746	RAB41	100	100.000	ENSPREG00000009535	RAB41	100	100.000	Poecilia_reticulata
ENSLBEG00000008746	RAB41	93	68.528	ENSRBIG00000027991	RAB41	87	68.528	Rhinopithecus_bieti
ENSLBEG00000008746	RAB41	99	98.565	ENSSFOG00015011268	RAB41	99	98.565	Scleropages_formosus
ENSLBEG00000008746	RAB41	100	98.131	ENSTNIG00000016831	RAB41	100	98.131	Tetraodon_nigroviridis
ENSLBEG00000008746	RAB41	99	96.172	ENSXETG00000030938	rab41	99	96.172	Xenopus_tropicalis
ENSLBEG00000008746	RAB41	100	100.000	ENSXCOG00000015802	RAB41	100	100.000	Xiphophorus_couchianus
ENSLBEG00000008746	RAB41	100	100.000	ENSXMAG00000027787	RAB41	100	100.000	Xiphophorus_maculatus