EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000008789 (Gene tree)
Gene ID
109982081
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Plus strand
Length
20863 bases
Position
chrFKLU01000039.1:1145379-1166241
Accession
109982081
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000011422RRM_1PF00076.226.8e-3312
ENSLBEP00000011422RRM_1PF00076.226.8e-3322
ENSLBEP00000011399RRM_1PF00076.228.2e-3312
ENSLBEP00000011399RRM_1PF00076.228.2e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000011990MSI1-2013184XM_020631149ENSLBEP00000011399349 (aa)XP_020486805UPI0009B375A6
ENSLBET00000012013MSI1-2023127-ENSLBEP00000011422330 (aa)--
Gene Model
Click here to download ENSLBEG00000008789's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000008789's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000008789MSI16043.939ENSLBEG00000027508hnrnpd8438.115
ENSLBEG00000008789MSI15140.506ENSLBEG00000006362-7840.506
ENSLBEG00000008789MSI15745.455ENSLBEG00000006595hnrnpaba7438.672
ENSLBEG00000008789MSI19676.772ENSLBEG00000007061msi2a9773.529
ENSLBEG00000008789MSI19457.558ENSLBEG00000026223-10055.263
ENSLBEG00000008789MSI15839.487ENSLBEG00000010010hnrnpa1a5340.761
ENSLBEG00000008789MSI110092.593ENSLBEG00000001375-10092.593
ENSLBEG00000008789MSI15640.107ENSLBEG00000016767hnrnpa36937.238
ENSLBEG00000008789MSI15432.927ENSLBEG00000023163TRA2B5032.927
ENSLBEG00000008789MSI15546.667ENSLBEG00000004479-7439.683
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000008789MSI110084.254ENSG00000135097MSI19987.500Homo_sapiens
ENSLBEG00000008789MSI110098.567ENSAPOG00000023458-10098.567Acanthochromis_polyacanthus
ENSLBEG00000008789MSI110092.593ENSAPOG00000003191MSI110092.593Acanthochromis_polyacanthus
ENSLBEG00000008789MSI19468.232ENSAMEG00000013302MSI110068.232Ailuropoda_melanoleuca
ENSLBEG00000008789MSI19488.673ENSACIG00000017754-7890.939Amphilophus_citrinellus
ENSLBEG00000008789MSI19492.628ENSAOCG00000009031-9592.628Amphiprion_ocellaris
ENSLBEG00000008789MSI110092.593ENSAOCG00000003804MSI110092.593Amphiprion_ocellaris
ENSLBEG00000008789MSI110092.593ENSAPEG00000003245MSI110092.593Amphiprion_percula
ENSLBEG00000008789MSI110098.567ENSAPEG00000006857-8498.567Amphiprion_percula
ENSLBEG00000008789MSI110094.930ENSATEG00000017059MSI110094.930Anabas_testudineus
ENSLBEG00000008789MSI110084.507ENSATEG00000023779-10084.507Anabas_testudineus
ENSLBEG00000008789MSI110085.042ENSACAG00000002762MSI19686.957Anolis_carolinensis
ENSLBEG00000008789MSI18284.965ENSANAG00000027901-8884.965Aotus_nancymaae
ENSLBEG00000008789MSI110084.254ENSANAG00000027151MSI110084.254Aotus_nancymaae
ENSLBEG00000008789MSI110098.567ENSACLG00000000117-10099.085Astatotilapia_calliptera
ENSLBEG00000008789MSI110093.162ENSACLG00000011230MSI110093.162Astatotilapia_calliptera
ENSLBEG00000008789MSI19493.417ENSAMXG00000038960msi17693.417Astyanax_mexicanus
ENSLBEG00000008789MSI110084.254ENSBTAG00000009800MSI110086.646Bos_taurus
ENSLBEG00000008789MSI110084.254ENSCJAG00000008578MSI110084.254Callithrix_jacchus
ENSLBEG00000008789MSI110083.978ENSCAFG00000010283MSI110083.978Canis_familiaris
ENSLBEG00000008789MSI19485.531ENSCAFG00020020585MSI110085.531Canis_lupus_dingo
ENSLBEG00000008789MSI110082.016ENSCHIG00000024304MSI110082.016Capra_hircus
ENSLBEG00000008789MSI19484.709ENSTSYG00000033949MSI19584.709Carlito_syrichta
ENSLBEG00000008789MSI19480.220ENSCAPG00000003919MSI18976.358Cavia_aperea
ENSLBEG00000008789MSI19585.174ENSCPOG00000012361MSI110085.380Cavia_porcellus
ENSLBEG00000008789MSI110084.254ENSCCAG00000035567MSI110084.254Cebus_capucinus
ENSLBEG00000008789MSI110084.254ENSCATG00000030019MSI110084.254Cercocebus_atys
ENSLBEG00000008789MSI19485.380ENSCLAG00000011329MSI110085.380Chinchilla_lanigera
ENSLBEG00000008789MSI17489.344ENSCSAG00000002265MSI19684.477Chlorocebus_sabaeus
ENSLBEG00000008789MSI110087.749ENSCPBG00000011349MSI110087.749Chrysemys_picta_bellii
ENSLBEG00000008789MSI19484.756ENSCANG00000040651MSI110084.756Colobus_angolensis_palliatus
ENSLBEG00000008789MSI110084.254ENSCGRG00001018883Msi110084.254Cricetulus_griseus_chok1gshd
ENSLBEG00000008789MSI19484.802ENSCGRG00000002191Msi17284.802Cricetulus_griseus_crigri
ENSLBEG00000008789MSI110096.848ENSCSEG00000008352-10096.848Cynoglossus_semilaevis
ENSLBEG00000008789MSI19494.175ENSCSEG00000011032MSI110094.175Cynoglossus_semilaevis
ENSLBEG00000008789MSI110091.738ENSCSEG00000005834-10091.738Cynoglossus_semilaevis
ENSLBEG00000008789MSI16274.771ENSCVAG00000017463-8974.771Cyprinodon_variegatus
ENSLBEG00000008789MSI15466.418ENSCVAG00000017430zgc:1107969466.418Cyprinodon_variegatus
ENSLBEG00000008789MSI110097.708ENSCVAG00000009100MSI110097.708Cyprinodon_variegatus
ENSLBEG00000008789MSI19494.932ENSDARG00000010710msi110095.327Danio_rerio
ENSLBEG00000008789MSI17992.130ENSDARG00000102015CABZ01037298.19892.130Danio_rerio
ENSLBEG00000008789MSI19482.278ENSDNOG00000005713MSI19182.278Dasypus_novemcinctus
ENSLBEG00000008789MSI19484.132ENSDORG00000005610Msi19484.132Dipodomys_ordii
ENSLBEG00000008789MSI19481.402ENSETEG00000004756MSI110081.402Echinops_telfairi
ENSLBEG00000008789MSI110085.423ENSEASG00005004736MSI110085.423Equus_asinus_asinus
ENSLBEG00000008789MSI110084.254ENSECAG00000017526MSI110084.254Equus_caballus
ENSLBEG00000008789MSI19487.578ENSELUG00000023280-10087.267Esox_lucius
ENSLBEG00000008789MSI19690.179ENSELUG00000023219MSI19290.258Esox_lucius
ENSLBEG00000008789MSI110084.254ENSFCAG00000011007MSI110084.254Felis_catus
ENSLBEG00000008789MSI19489.333ENSFALG00000007574MSI110089.333Ficedula_albicollis
ENSLBEG00000008789MSI19484.451ENSFDAG00000019586MSI110084.451Fukomys_damarensis
ENSLBEG00000008789MSI110098.281ENSFHEG00000022446MSI110098.281Fundulus_heteroclitus
ENSLBEG00000008789MSI110092.593ENSFHEG00000003560-10092.593Fundulus_heteroclitus
ENSLBEG00000008789MSI110083.662ENSGMOG00000017838-10083.380Gadus_morhua
ENSLBEG00000008789MSI110095.702ENSGMOG00000001006MSI19995.702Gadus_morhua
ENSLBEG00000008789MSI19488.931ENSGALG00000007227MSI19876.882Gallus_gallus
ENSLBEG00000008789MSI19492.401ENSGAFG00000021522MSI19492.401Gambusia_affinis
ENSLBEG00000008789MSI110079.279ENSGAFG00000005860-10079.279Gambusia_affinis
ENSLBEG00000008789MSI110097.421ENSGACG00000012679MSI110097.421Gasterosteus_aculeatus
ENSLBEG00000008789MSI110084.765ENSGACG00000008674-10084.765Gasterosteus_aculeatus
ENSLBEG00000008789MSI110088.855ENSGAGG00000016037MSI110088.855Gopherus_agassizii
ENSLBEG00000008789MSI19485.350ENSGGOG00000010328MSI110085.350Gorilla_gorilla
ENSLBEG00000008789MSI110093.162ENSHBUG00000021921MSI110093.162Haplochromis_burtoni
ENSLBEG00000008789MSI110098.567ENSHBUG00000011841-10098.567Haplochromis_burtoni
ENSLBEG00000008789MSI110083.978ENSHGLG00000012782MSI110083.978Heterocephalus_glaber_female
ENSLBEG00000008789MSI19484.451ENSHGLG00100016848MSI110084.451Heterocephalus_glaber_male
ENSLBEG00000008789MSI110092.635ENSHCOG00000012067-10092.635Hippocampus_comes
ENSLBEG00000008789MSI19491.262ENSHCOG00000012019MSI110091.262Hippocampus_comes
ENSLBEG00000008789MSI110091.691ENSIPUG00000001976msi19992.667Ictalurus_punctatus
ENSLBEG00000008789MSI19485.531ENSSTOG00000009799MSI110085.531Ictidomys_tridecemlineatus
ENSLBEG00000008789MSI110084.254ENSJJAG00000010463Msi110084.254Jaculus_jaculus
ENSLBEG00000008789MSI110075.219ENSJJAG00000010643-10075.219Jaculus_jaculus
ENSLBEG00000008789MSI110097.708ENSKMAG00000011251MSI110097.708Kryptolebias_marmoratus
ENSLBEG00000008789MSI19492.557ENSKMAG00000019877-10092.557Kryptolebias_marmoratus
ENSLBEG00000008789MSI19484.503ENSLACG00000018287MSI110084.503Latimeria_chalumnae
ENSLBEG00000008789MSI15579.091ENSLOCG00000008618zgc:1107967179.091Lepisosteus_oculatus
ENSLBEG00000008789MSI19175.529ENSLAFG00000009412MSI110076.393Loxodonta_africana
ENSLBEG00000008789MSI19485.380ENSMFAG00000001798MSI110085.380Macaca_fascicularis
ENSLBEG00000008789MSI19485.380ENSMMUG00000031527MSI19784.726Macaca_mulatta
ENSLBEG00000008789MSI110085.423ENSMNEG00000040034MSI110085.423Macaca_nemestrina
ENSLBEG00000008789MSI19484.756ENSMLEG00000003921MSI110084.756Mandrillus_leucophaeus
ENSLBEG00000008789MSI110097.708ENSMAMG00000002279MSI110097.708Mastacembelus_armatus
ENSLBEG00000008789MSI110091.738ENSMAMG00000018426-10092.023Mastacembelus_armatus
ENSLBEG00000008789MSI110098.567ENSMZEG00005000340-10098.567Maylandia_zebra
ENSLBEG00000008789MSI110093.162ENSMZEG00005026892MSI110093.162Maylandia_zebra
ENSLBEG00000008789MSI16794.083ENSMGAG00000016518-10094.083Meleagris_gallopavo
ENSLBEG00000008789MSI16891.518ENSMAUG00000016820Msi110089.300Mesocricetus_auratus
ENSLBEG00000008789MSI110084.254ENSMICG00000033181MSI110084.254Microcebus_murinus
ENSLBEG00000008789MSI110083.978ENSMOCG00000002286Msi110083.978Microtus_ochrogaster
ENSLBEG00000008789MSI19491.613ENSMMOG00000010492MSI19691.613Mola_mola
ENSLBEG00000008789MSI110086.970ENSMMOG00000012265-9990.492Mola_mola
ENSLBEG00000008789MSI19157.831ENSMODG00000003189-10057.831Monodelphis_domestica
ENSLBEG00000008789MSI19492.683ENSMALG00000001426-10092.683Monopterus_albus
ENSLBEG00000008789MSI110098.854ENSMALG00000017889MSI110098.854Monopterus_albus
ENSLBEG00000008789MSI110083.702MGP_CAROLIEiJ_G0027626Msi19888.973Mus_caroli
ENSLBEG00000008789MSI110083.702ENSMUSG00000054256Msi19888.973Mus_musculus
ENSLBEG00000008789MSI110086.040MGP_PahariEiJ_G0024206Msi19888.593Mus_pahari
ENSLBEG00000008789MSI110083.702MGP_SPRETEiJ_G0028624Msi19888.973Mus_spretus
ENSLBEG00000008789MSI19485.531ENSMPUG00000003168MSI110085.531Mustela_putorius_furo
ENSLBEG00000008789MSI19476.190ENSMLUG00000010313MSI110076.190Myotis_lucifugus
ENSLBEG00000008789MSI19484.802ENSNGAG00000014508Msi19184.802Nannospalax_galili
ENSLBEG00000008789MSI110098.567ENSNBRG00000000841-10098.567Neolamprologus_brichardi
ENSLBEG00000008789MSI18985.656ENSNBRG00000018012MSI19985.656Neolamprologus_brichardi
ENSLBEG00000008789MSI19075.305ENSNLEG00000015636MSI110075.305Nomascus_leucogenys
ENSLBEG00000008789MSI19464.939ENSMEUG00000015759MSI110064.939Notamacropus_eugenii
ENSLBEG00000008789MSI19177.778ENSOPRG00000016879MSI110077.778Ochotona_princeps
ENSLBEG00000008789MSI19484.756ENSODEG00000006328MSI110084.756Octodon_degus
ENSLBEG00000008789MSI110089.835ENSONIG00000019452-10089.835Oreochromis_niloticus
ENSLBEG00000008789MSI110098.567ENSONIG00000011182MSI110098.567Oreochromis_niloticus
ENSLBEG00000008789MSI19485.531ENSOCUG00000027716MSI110085.531Oryctolagus_cuniculus
ENSLBEG00000008789MSI110091.453ENSORLG00000029593MSI110091.453Oryzias_latipes
ENSLBEG00000008789MSI110098.567ENSORLG00000019978-10098.567Oryzias_latipes
ENSLBEG00000008789MSI110091.453ENSORLG00020008266MSI19992.581Oryzias_latipes_hni
ENSLBEG00000008789MSI110098.567ENSORLG00020001208-7198.567Oryzias_latipes_hni
ENSLBEG00000008789MSI110098.567ENSORLG00015013672-7698.485Oryzias_latipes_hsok
ENSLBEG00000008789MSI110091.453ENSORLG00015003916MSI19992.581Oryzias_latipes_hsok
ENSLBEG00000008789MSI110091.738ENSOMEG00000002272-10091.738Oryzias_melastigma
ENSLBEG00000008789MSI110098.854ENSOMEG00000017536MSI110098.854Oryzias_melastigma
ENSLBEG00000008789MSI19981.593ENSOGAG00000003847MSI19684.000Otolemur_garnettii
ENSLBEG00000008789MSI19481.818ENSOARG00000012097MSI110081.818Ovis_aries
ENSLBEG00000008789MSI19484.756ENSPPAG00000043073MSI110084.756Pan_paniscus
ENSLBEG00000008789MSI110084.254ENSPPRG00000000370MSI110084.254Panthera_pardus
ENSLBEG00000008789MSI19485.531ENSPTIG00000008913MSI110085.531Panthera_tigris_altaica
ENSLBEG00000008789MSI110084.254ENSPTRG00000005531MSI110084.254Pan_troglodytes
ENSLBEG00000008789MSI110083.978ENSPANG00000006335MSI110083.978Papio_anubis
ENSLBEG00000008789MSI110093.939ENSPKIG00000016497MSI110093.939Paramormyrops_kingsleyae
ENSLBEG00000008789MSI110093.123ENSPKIG00000023575-10093.123Paramormyrops_kingsleyae
ENSLBEG00000008789MSI15185.965ENSPSIG00000016295-9584.615Pelodiscus_sinensis
ENSLBEG00000008789MSI17980.349ENSPSIG00000009621-10080.349Pelodiscus_sinensis
ENSLBEG00000008789MSI19485.410ENSPSIG00000011608-9385.152Pelodiscus_sinensis
ENSLBEG00000008789MSI19098.316ENSPMGG00000000514MSI19798.316Periophthalmus_magnuspinnatus
ENSLBEG00000008789MSI19474.320ENSPMGG00000007743-9272.222Periophthalmus_magnuspinnatus
ENSLBEG00000008789MSI19483.383ENSPEMG00000010491Msi19583.383Peromyscus_maniculatus_bairdii
ENSLBEG00000008789MSI110092.023ENSPFOG00000008319-8692.023Poecilia_formosa
ENSLBEG00000008789MSI110098.281ENSPFOG00000013113MSI110098.281Poecilia_formosa
ENSLBEG00000008789MSI110092.023ENSPLAG00000012431-9792.023Poecilia_latipinna
ENSLBEG00000008789MSI110098.281ENSPLAG00000014025-10098.281Poecilia_latipinna
ENSLBEG00000008789MSI110091.453ENSPMEG00000007025-9385.942Poecilia_mexicana
ENSLBEG00000008789MSI110098.281ENSPMEG00000012796MSI110098.281Poecilia_mexicana
ENSLBEG00000008789MSI19888.235ENSPREG00000021416-9590.127Poecilia_reticulata
ENSLBEG00000008789MSI17594.059ENSPREG00000014574-10094.059Poecilia_reticulata
ENSLBEG00000008789MSI110083.425ENSPPYG00000005027MSI110083.425Pongo_abelii
ENSLBEG00000008789MSI17690.355ENSPCAG00000002300MSI17290.355Procavia_capensis
ENSLBEG00000008789MSI110084.254ENSPCOG00000017341MSI110084.254Propithecus_coquereli
ENSLBEG00000008789MSI19469.207ENSPVAG00000002225MSI110069.207Pteropus_vampyrus
ENSLBEG00000008789MSI110093.162ENSPNYG00000004379MSI110093.162Pundamilia_nyererei
ENSLBEG00000008789MSI110098.567ENSPNYG00000002529-10098.567Pundamilia_nyererei
ENSLBEG00000008789MSI110092.837ENSPNAG00000019337msi110092.837Pygocentrus_nattereri
ENSLBEG00000008789MSI19485.209ENSRNOG00000001156Msi110085.209Rattus_norvegicus
ENSLBEG00000008789MSI19485.531ENSRBIG00000036889MSI110085.531Rhinopithecus_bieti
ENSLBEG00000008789MSI19484.545ENSRROG00000041076MSI19384.545Rhinopithecus_roxellana
ENSLBEG00000008789MSI19485.380ENSSBOG00000030259MSI19985.380Saimiri_boliviensis_boliviensis
ENSLBEG00000008789MSI19475.490ENSSHAG00000006834MSI110075.490Sarcophilus_harrisii
ENSLBEG00000008789MSI19494.498ENSSFOG00015005350MSI110094.498Scleropages_formosus
ENSLBEG00000008789MSI19494.833ENSSFOG00015014964-9594.833Scleropages_formosus
ENSLBEG00000008789MSI110090.909ENSSMAG00000018824MSI110090.909Scophthalmus_maximus
ENSLBEG00000008789MSI19493.130ENSSMAG00000009156-7391.626Scophthalmus_maximus
ENSLBEG00000008789MSI110092.877ENSSDUG00000022697-10092.877Seriola_dumerili
ENSLBEG00000008789MSI110099.140ENSSDUG00000001027MSI110099.140Seriola_dumerili
ENSLBEG00000008789MSI110099.140ENSSLDG00000016832MSI110099.140Seriola_lalandi_dorsalis
ENSLBEG00000008789MSI110083.965ENSSLDG00000018706-9987.421Seriola_lalandi_dorsalis
ENSLBEG00000008789MSI110087.464ENSSPUG00000015741MSI110087.464Sphenodon_punctatus
ENSLBEG00000008789MSI17587.500ENSSPAG00000014085-10087.500Stegastes_partitus
ENSLBEG00000008789MSI15785.625ENSSPAG00000015573zgc:1107968285.625Stegastes_partitus
ENSLBEG00000008789MSI19494.194ENSSPAG00000013098-10093.902Stegastes_partitus
ENSLBEG00000008789MSI110085.131ENSSSCG00000029365MSI110085.209Sus_scrofa
ENSLBEG00000008789MSI19486.471ENSTGUG00000009534MSI110086.471Taeniopygia_guttata
ENSLBEG00000008789MSI15391.753ENSTRUG00000021586-9991.753Takifugu_rubripes
ENSLBEG00000008789MSI19486.195ENSTRUG00000015636-7986.195Takifugu_rubripes
ENSLBEG00000008789MSI18986.614ENSTRUG00000016249MSI110086.614Takifugu_rubripes
ENSLBEG00000008789MSI110093.466ENSTNIG00000011469MSI110093.466Tetraodon_nigroviridis
ENSLBEG00000008789MSI19966.265ENSTNIG00000019814-9667.500Tetraodon_nigroviridis
ENSLBEG00000008789MSI19475.092ENSTBEG00000007182MSI110075.092Tupaia_belangeri
ENSLBEG00000008789MSI17689.474ENSTTRG00000005663MSI17889.474Tursiops_truncatus
ENSLBEG00000008789MSI17585.321ENSUAMG00000015514MSI19487.963Ursus_americanus
ENSLBEG00000008789MSI19482.886ENSUMAG00000006176MSI18882.886Ursus_maritimus
ENSLBEG00000008789MSI19484.802ENSVVUG00000020993MSI110084.084Vulpes_vulpes
ENSLBEG00000008789MSI110085.100ENSXETG00000012216msi110085.673Xenopus_tropicalis
ENSLBEG00000008789MSI19480.000ENSXCOG00000017605MSI18980.000Xiphophorus_couchianus
ENSLBEG00000008789MSI110091.738ENSXMAG00000018237-10091.738Xiphophorus_maculatus
ENSLBEG00000008789MSI110097.708ENSXMAG00000027103MSI110089.614Xiphophorus_maculatus

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