EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000008793 (Gene tree)
Gene ID: 109981445
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 6552 bases
Position: chrFKLU01000031.1:2235064-2241615
Accession: 109981445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000011405	Nucleoplasmin	PF03066.15	1.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000011996	-	2173	XM_020630232	ENSLBEP00000011405	298 (aa)	XP_020485888	UPI0009B333B6

Gene Model

Click here to download ENSLBEG00000008793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000008793's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000008793	npm1a	100	72.517	ENSAPOG00000002813	npm1a	100	73.510	Acanthochromis_polyacanthus
ENSLBEG00000008793	npm1a	93	68.100	ENSACIG00000014201	npm1a	99	70.775	Amphilophus_citrinellus
ENSLBEG00000008793	npm1a	89	64.662	ENSAOCG00000004978	npm1a	100	64.662	Amphiprion_ocellaris
ENSLBEG00000008793	npm1a	100	75.251	ENSAPEG00000008594	npm1a	100	75.251	Amphiprion_percula
ENSLBEG00000008793	npm1a	100	75.563	ENSATEG00000008885	npm1a	100	75.563	Anabas_testudineus
ENSLBEG00000008793	npm1a	95	67.138	ENSACLG00000008376	npm1a	94	68.905	Astatotilapia_calliptera
ENSLBEG00000008793	npm1a	98	55.822	ENSAMXG00000010155	npm1a	98	57.045	Astyanax_mexicanus
ENSLBEG00000008793	npm1a	76	83.117	ENSCSEG00000011165	npm1a	96	83.117	Cynoglossus_semilaevis
ENSLBEG00000008793	npm1a	99	68.581	ENSCVAG00000008960	npm1a	100	68.333	Cyprinodon_variegatus
ENSLBEG00000008793	npm1a	98	62.199	ENSDARG00000014329	npm1a	95	66.667	Danio_rerio
ENSLBEG00000008793	npm1a	92	37.410	ENSEBUG00000012753	npm1a	87	34.628	Eptatretus_burgeri
ENSLBEG00000008793	npm1a	100	68.771	ENSELUG00000013705	npm1a	100	68.439	Esox_lucius
ENSLBEG00000008793	npm1a	100	67.869	ENSFHEG00000012496	npm1a	100	67.541	Fundulus_heteroclitus
ENSLBEG00000008793	npm1a	100	66.776	ENSGAFG00000013059	npm1a	100	66.118	Gambusia_affinis
ENSLBEG00000008793	npm1a	99	64.983	ENSGACG00000020319	npm1a	99	63.973	Gasterosteus_aculeatus
ENSLBEG00000008793	npm1a	99	69.841	ENSHBUG00000000776	npm1a	99	70.476	Haplochromis_burtoni
ENSLBEG00000008793	npm1a	100	54.248	ENSHCOG00000001059	npm1a	100	54.248	Hippocampus_comes
ENSLBEG00000008793	npm1a	98	61.258	ENSIPUG00000019452	npm1	99	61.462	Ictalurus_punctatus
ENSLBEG00000008793	npm1a	99	67.119	ENSKMAG00000010709	npm1a	100	66.555	Kryptolebias_marmoratus
ENSLBEG00000008793	npm1a	85	54.745	ENSLOCG00000009683	npm1a	100	55.839	Lepisosteus_oculatus
ENSLBEG00000008793	npm1a	100	74.916	ENSMAMG00000009344	npm1a	83	73.913	Mastacembelus_armatus
ENSLBEG00000008793	npm1a	99	69.108	ENSMZEG00005013717	npm1a	99	71.656	Maylandia_zebra
ENSLBEG00000008793	npm1a	95	68.421	ENSMMOG00000007980	npm1a	100	69.474	Mola_mola
ENSLBEG00000008793	npm1a	100	69.103	ENSMALG00000001146	npm1a	100	71.096	Monopterus_albus
ENSLBEG00000008793	npm1a	99	63.608	ENSNBRG00000013172	npm1a	99	66.456	Neolamprologus_brichardi
ENSLBEG00000008793	npm1a	99	67.000	ENSONIG00000001860	npm1a	98	68.333	Oreochromis_niloticus
ENSLBEG00000008793	npm1a	100	71.906	ENSORLG00000010179	npm1a	100	71.906	Oryzias_latipes
ENSLBEG00000008793	npm1a	100	71.906	ENSORLG00020020817	npm1a	100	71.906	Oryzias_latipes_hni
ENSLBEG00000008793	npm1a	100	71.906	ENSORLG00015003439	npm1a	100	71.906	Oryzias_latipes_hsok
ENSLBEG00000008793	npm1a	99	71.864	ENSOMEG00000007083	npm1a	100	70.903	Oryzias_melastigma
ENSLBEG00000008793	npm1a	100	55.263	ENSPKIG00000023943	npm1a	100	54.605	Paramormyrops_kingsleyae
ENSLBEG00000008793	npm1a	100	59.532	ENSPMGG00000011716	npm1a	100	59.532	Periophthalmus_magnuspinnatus
ENSLBEG00000008793	npm1a	100	66.447	ENSPFOG00000019173	npm1a	100	67.763	Poecilia_formosa
ENSLBEG00000008793	npm1a	100	65.359	ENSPLAG00000001093	npm1a	100	66.340	Poecilia_latipinna
ENSLBEG00000008793	npm1a	100	66.447	ENSPMEG00000012523	npm1a	100	67.763	Poecilia_mexicana
ENSLBEG00000008793	npm1a	99	68.667	ENSPREG00000001647	npm1a	100	69.079	Poecilia_reticulata
ENSLBEG00000008793	npm1a	99	71.290	ENSPNYG00000019321	npm1a	99	71.935	Pundamilia_nyererei
ENSLBEG00000008793	npm1a	98	59.532	ENSPNAG00000026891	npm1a	99	60.201	Pygocentrus_nattereri
ENSLBEG00000008793	npm1a	100	59.736	ENSSFOG00015007074	npm1a	100	59.076	Scleropages_formosus
ENSLBEG00000008793	npm1a	100	72.517	ENSSMAG00000019090	npm1a	100	72.185	Scophthalmus_maximus
ENSLBEG00000008793	npm1a	100	75.920	ENSSDUG00000015609	npm1a	100	75.585	Seriola_dumerili
ENSLBEG00000008793	npm1a	100	76.254	ENSSLDG00000017849	npm1a	100	76.254	Seriola_lalandi_dorsalis
ENSLBEG00000008793	npm1a	100	57.525	ENSSPAG00000021660	npm1a	93	86.885	Stegastes_partitus
ENSLBEG00000008793	npm1a	100	71.287	ENSTRUG00000024003	npm1a	100	72.277	Takifugu_rubripes
ENSLBEG00000008793	npm1a	100	69.333	ENSTNIG00000010773	npm1a	100	69.000	Tetraodon_nigroviridis
ENSLBEG00000008793	npm1a	99	59.933	ENSXCOG00000005958	npm1a	99	64.460	Xiphophorus_couchianus
ENSLBEG00000008793	npm1a	100	67.974	ENSXMAG00000000396	npm1a	100	67.974	Xiphophorus_maculatus