EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000009167 (Gene tree)
Gene ID: 109991767
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease PARN-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 12208 bases
Position: chrFKLU01000008.1:834766-846973
Accession: 109991767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000011980	RNA_bind	PF08675.11	1.6e-33	1	1
ENSLBEP00000011980	CAF1	PF04857.20	1.5e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000012602	-	4957	XM_020644130	ENSLBEP00000011980	637 (aa)	XP_020499786	-

Gene Model

Click here to download ENSLBEG00000009167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000009167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000009167	parn	90	73.005	ENSG00000140694	PARN	91	77.966	Homo_sapiens
ENSLBEG00000009167	parn	89	72.213	ENSAMEG00000011208	PARN	90	72.213	Ailuropoda_melanoleuca
ENSLBEG00000009167	parn	93	81.719	ENSACIG00000000619	parn	99	82.031	Amphilophus_citrinellus
ENSLBEG00000009167	parn	98	90.127	ENSAOCG00000003465	parn	93	89.185	Amphiprion_ocellaris
ENSLBEG00000009167	parn	77	91.446	ENSAPEG00000010661	parn	94	91.446	Amphiprion_percula
ENSLBEG00000009167	parn	100	89.655	ENSATEG00000004661	parn	93	89.655	Anabas_testudineus
ENSLBEG00000009167	parn	88	72.539	ENSAPLG00000013914	PARN	90	72.884	Anas_platyrhynchos
ENSLBEG00000009167	parn	89	73.435	ENSACAG00000004973	PARN	99	68.079	Anolis_carolinensis
ENSLBEG00000009167	parn	90	72.835	ENSANAG00000031516	PARN	91	77.966	Aotus_nancymaae
ENSLBEG00000009167	parn	100	88.558	ENSACLG00000004742	parn	93	88.871	Astatotilapia_calliptera
ENSLBEG00000009167	parn	96	77.581	ENSAMXG00000012390	parn	97	75.374	Astyanax_mexicanus
ENSLBEG00000009167	parn	90	68.710	ENSBTAG00000018097	PARN	91	70.841	Bos_taurus
ENSLBEG00000009167	parn	90	72.835	ENSCJAG00000015866	PARN	91	77.966	Callithrix_jacchus
ENSLBEG00000009167	parn	90	71.164	ENSCAFG00000018795	PARN	92	71.164	Canis_familiaris
ENSLBEG00000009167	parn	90	71.501	ENSCAFG00020024126	PARN	92	71.501	Canis_lupus_dingo
ENSLBEG00000009167	parn	89	72.308	ENSCHIG00000018143	PARN	90	72.308	Capra_hircus
ENSLBEG00000009167	parn	73	51.346	ENSCAPG00000007984	PARN	78	51.346	Cavia_aperea
ENSLBEG00000009167	parn	90	72.148	ENSCPOG00000002263	PARN	92	72.148	Cavia_porcellus
ENSLBEG00000009167	parn	90	72.835	ENSCCAG00000030367	PARN	91	77.966	Cebus_capucinus
ENSLBEG00000009167	parn	84	77.425	ENSCATG00000041368	PARN	95	77.425	Cercocebus_atys
ENSLBEG00000009167	parn	54	34.722	ENSCATG00000033196	PNLDC1	72	34.722	Cercocebus_atys
ENSLBEG00000009167	parn	90	72.437	ENSCLAG00000015406	PARN	92	72.437	Chinchilla_lanigera
ENSLBEG00000009167	parn	90	72.835	ENSCSAG00000008142	PARN	91	73.005	Chlorocebus_sabaeus
ENSLBEG00000009167	parn	88	56.724	ENSCHOG00000007014	PARN	91	56.724	Choloepus_hoffmanni
ENSLBEG00000009167	parn	80	73.282	ENSCPBG00000006609	PARN	90	73.282	Chrysemys_picta_bellii
ENSLBEG00000009167	parn	80	42.402	ENSCING00000010142	-	99	42.402	Ciona_intestinalis
ENSLBEG00000009167	parn	90	61.960	ENSCANG00000028849	-	87	77.966	Colobus_angolensis_palliatus
ENSLBEG00000009167	parn	89	72.964	ENSCGRG00001012096	Parn	91	72.964	Cricetulus_griseus_chok1gshd
ENSLBEG00000009167	parn	89	72.964	ENSCGRG00000004939	Parn	91	72.964	Cricetulus_griseus_crigri
ENSLBEG00000009167	parn	99	83.622	ENSCSEG00000002064	parn	100	79.545	Cynoglossus_semilaevis
ENSLBEG00000009167	parn	99	84.094	ENSCVAG00000014848	parn	93	84.094	Cyprinodon_variegatus
ENSLBEG00000009167	parn	99	69.749	ENSDARG00000102634	parn	96	69.749	Danio_rerio
ENSLBEG00000009167	parn	90	72.054	ENSDNOG00000000833	PARN	96	75.362	Dasypus_novemcinctus
ENSLBEG00000009167	parn	66	74.621	ENSETEG00000014828	-	69	74.621	Echinops_telfairi
ENSLBEG00000009167	parn	89	72.337	ENSEASG00005011400	PARN	90	72.337	Equus_asinus_asinus
ENSLBEG00000009167	parn	89	72.509	ENSECAG00000017792	PARN	90	72.509	Equus_caballus
ENSLBEG00000009167	parn	75	64.414	ENSEEUG00000010370	PARN	77	64.414	Erinaceus_europaeus
ENSLBEG00000009167	parn	98	79.463	ENSELUG00000013139	parn	84	79.030	Esox_lucius
ENSLBEG00000009167	parn	90	72.007	ENSFCAG00000044961	PARN	89	76.271	Felis_catus
ENSLBEG00000009167	parn	88	72.491	ENSFALG00000003911	PARN	89	72.837	Ficedula_albicollis
ENSLBEG00000009167	parn	90	72.101	ENSFDAG00000009234	PARN	92	72.101	Fukomys_damarensis
ENSLBEG00000009167	parn	93	80.067	ENSFHEG00000013738	parn	92	89.831	Fundulus_heteroclitus
ENSLBEG00000009167	parn	86	85.064	ENSGMOG00000003231	parn	99	85.064	Gadus_morhua
ENSLBEG00000009167	parn	96	68.829	ENSGALG00000003091	PARN	99	69.146	Gallus_gallus
ENSLBEG00000009167	parn	99	83.281	ENSGAFG00000011061	parn	93	83.281	Gambusia_affinis
ENSLBEG00000009167	parn	90	86.482	ENSGACG00000019501	parn	97	83.333	Gasterosteus_aculeatus
ENSLBEG00000009167	parn	90	73.175	ENSGGOG00000025224	PARN	91	77.966	Gorilla_gorilla
ENSLBEG00000009167	parn	100	88.715	ENSHBUG00000017906	parn	93	90.450	Haplochromis_burtoni
ENSLBEG00000009167	parn	90	72.542	ENSHGLG00000010886	PARN	91	72.542	Heterocephalus_glaber_female
ENSLBEG00000009167	parn	90	72.542	ENSHGLG00100014659	PARN	91	72.542	Heterocephalus_glaber_male
ENSLBEG00000009167	parn	89	79.514	ENSHCOG00000008683	parn	99	79.514	Hippocampus_comes
ENSLBEG00000009167	parn	99	63.323	ENSIPUG00000012401	parn	96	63.537	Ictalurus_punctatus
ENSLBEG00000009167	parn	90	71.525	ENSSTOG00000007519	PARN	92	71.404	Ictidomys_tridecemlineatus
ENSLBEG00000009167	parn	90	72.727	ENSJJAG00000023049	Parn	92	72.727	Jaculus_jaculus
ENSLBEG00000009167	parn	99	86.478	ENSKMAG00000009462	parn	93	86.478	Kryptolebias_marmoratus
ENSLBEG00000009167	parn	81	73.384	ENSLACG00000004207	PARN	100	74.764	Latimeria_chalumnae
ENSLBEG00000009167	parn	89	80.560	ENSLOCG00000000715	parn	84	80.174	Lepisosteus_oculatus
ENSLBEG00000009167	parn	54	30.000	ENSLAFG00000030189	PNLDC1	94	30.000	Loxodonta_africana
ENSLBEG00000009167	parn	90	73.254	ENSLAFG00000015036	PARN	92	73.254	Loxodonta_africana
ENSLBEG00000009167	parn	90	69.440	ENSMFAG00000044852	PARN	88	77.966	Macaca_fascicularis
ENSLBEG00000009167	parn	90	72.835	ENSMMUG00000018849	PARN	88	77.966	Macaca_mulatta
ENSLBEG00000009167	parn	90	72.835	ENSMNEG00000045108	PARN	88	77.966	Macaca_nemestrina
ENSLBEG00000009167	parn	90	72.666	ENSMLEG00000031743	PARN	88	77.966	Mandrillus_leucophaeus
ENSLBEG00000009167	parn	99	90.079	ENSMAMG00000006939	parn	92	90.079	Mastacembelus_armatus
ENSLBEG00000009167	parn	100	88.715	ENSMZEG00005013590	parn	94	89.028	Maylandia_zebra
ENSLBEG00000009167	parn	94	67.040	ENSMGAG00000001004	PARN	97	67.040	Meleagris_gallopavo
ENSLBEG00000009167	parn	89	67.918	ENSMAUG00000008025	Parn	91	67.918	Mesocricetus_auratus
ENSLBEG00000009167	parn	56	32.192	ENSMAUG00000012298	Pnldc1	72	32.192	Mesocricetus_auratus
ENSLBEG00000009167	parn	90	72.743	ENSMICG00000016053	PARN	91	76.271	Microcebus_murinus
ENSLBEG00000009167	parn	77	78.340	ENSMOCG00000022211	Parn	100	78.340	Microtus_ochrogaster
ENSLBEG00000009167	parn	86	87.523	ENSMMOG00000011333	parn	90	87.523	Mola_mola
ENSLBEG00000009167	parn	77	80.080	ENSMODG00000004915	PARN	99	80.080	Monodelphis_domestica
ENSLBEG00000009167	parn	95	88.689	ENSMALG00000019426	parn	94	91.336	Monopterus_albus
ENSLBEG00000009167	parn	89	71.902	MGP_CAROLIEiJ_G0020466	Parn	91	71.902	Mus_caroli
ENSLBEG00000009167	parn	89	71.404	ENSMUSG00000022685	Parn	100	75.610	Mus_musculus
ENSLBEG00000009167	parn	89	72.097	MGP_PahariEiJ_G0016172	Parn	91	72.097	Mus_pahari
ENSLBEG00000009167	parn	84	75.514	MGP_SPRETEiJ_G0021361	Parn	84	75.514	Mus_spretus
ENSLBEG00000009167	parn	90	71.886	ENSMPUG00000014464	PARN	92	71.886	Mustela_putorius_furo
ENSLBEG00000009167	parn	77	77.980	ENSMLUG00000005414	PARN	100	77.980	Myotis_lucifugus
ENSLBEG00000009167	parn	86	88.949	ENSNBRG00000006805	parn	93	89.312	Neolamprologus_brichardi
ENSLBEG00000009167	parn	90	72.804	ENSNLEG00000010241	PARN	91	77.966	Nomascus_leucogenys
ENSLBEG00000009167	parn	83	55.682	ENSMEUG00000008178	-	83	55.682	Notamacropus_eugenii
ENSLBEG00000009167	parn	88	68.166	ENSOPRG00000012187	PARN	91	68.166	Ochotona_princeps
ENSLBEG00000009167	parn	90	67.069	ENSODEG00000001617	PARN	92	67.069	Octodon_degus
ENSLBEG00000009167	parn	100	89.028	ENSONIG00000000151	parn	93	89.342	Oreochromis_niloticus
ENSLBEG00000009167	parn	89	73.368	ENSOCUG00000000322	PARN	91	73.368	Oryctolagus_cuniculus
ENSLBEG00000009167	parn	97	84.765	ENSORLG00020010313	parn	93	83.943	Oryzias_latipes_hni
ENSLBEG00000009167	parn	97	84.279	ENSORLG00015000300	parn	93	83.466	Oryzias_latipes_hsok
ENSLBEG00000009167	parn	99	83.492	ENSOMEG00000019555	parn	93	83.492	Oryzias_melastigma
ENSLBEG00000009167	parn	77	77.823	ENSOGAG00000014626	PARN	100	77.823	Otolemur_garnettii
ENSLBEG00000009167	parn	77	78.990	ENSOARG00000007574	PARN	100	78.990	Ovis_aries
ENSLBEG00000009167	parn	90	72.835	ENSPPAG00000031438	PARN	91	77.966	Pan_paniscus
ENSLBEG00000009167	parn	90	72.007	ENSPPRG00000018583	PARN	89	76.271	Panthera_pardus
ENSLBEG00000009167	parn	90	72.007	ENSPTIG00000012135	PARN	89	76.271	Panthera_tigris_altaica
ENSLBEG00000009167	parn	90	72.835	ENSPTRG00000007792	PARN	91	77.966	Pan_troglodytes
ENSLBEG00000009167	parn	90	70.458	ENSPANG00000020099	PARN	88	77.966	Papio_anubis
ENSLBEG00000009167	parn	99	73.333	ENSPKIG00000022807	parn	91	74.742	Paramormyrops_kingsleyae
ENSLBEG00000009167	parn	89	72.821	ENSPSIG00000014804	PARN	91	72.821	Pelodiscus_sinensis
ENSLBEG00000009167	parn	98	76.911	ENSPMGG00000014431	parn	86	76.911	Periophthalmus_magnuspinnatus
ENSLBEG00000009167	parn	89	71.528	ENSPEMG00000018439	Parn	91	71.528	Peromyscus_maniculatus_bairdii
ENSLBEG00000009167	parn	81	68.593	ENSPMAG00000003956	parn	98	68.593	Petromyzon_marinus
ENSLBEG00000009167	parn	66	71.495	ENSPCIG00000001259	PARN	91	77.966	Phascolarctos_cinereus
ENSLBEG00000009167	parn	99	84.169	ENSPFOG00000012823	parn	93	84.169	Poecilia_formosa
ENSLBEG00000009167	parn	99	84.326	ENSPLAG00000006395	parn	93	84.326	Poecilia_latipinna
ENSLBEG00000009167	parn	99	84.169	ENSPMEG00000007711	parn	93	84.169	Poecilia_mexicana
ENSLBEG00000009167	parn	99	84.013	ENSPREG00000000147	parn	93	84.013	Poecilia_reticulata
ENSLBEG00000009167	parn	90	72.420	ENSPPYG00000007123	PARN	91	72.420	Pongo_abelii
ENSLBEG00000009167	parn	85	62.679	ENSPCAG00000001741	PARN	92	62.679	Procavia_capensis
ENSLBEG00000009167	parn	90	69.646	ENSPCOG00000019292	PARN	91	76.271	Propithecus_coquereli
ENSLBEG00000009167	parn	88	70.435	ENSPVAG00000002547	PARN	90	70.435	Pteropus_vampyrus
ENSLBEG00000009167	parn	100	88.558	ENSPNYG00000006835	parn	93	88.871	Pundamilia_nyererei
ENSLBEG00000009167	parn	92	75.340	ENSPNAG00000018905	parn	94	75.340	Pygocentrus_nattereri
ENSLBEG00000009167	parn	89	72.617	ENSRNOG00000002912	Parn	96	81.633	Rattus_norvegicus
ENSLBEG00000009167	parn	90	71.138	ENSSBOG00000034726	PARN	88	77.966	Saimiri_boliviensis_boliviensis
ENSLBEG00000009167	parn	65	78.469	ENSSHAG00000008493	PARN	93	78.469	Sarcophilus_harrisii
ENSLBEG00000009167	parn	62	30.221	ENSSHAG00000015192	PNLDC1	65	30.221	Sarcophilus_harrisii
ENSLBEG00000009167	parn	99	73.547	ENSSFOG00015014165	parn	98	76.127	Scleropages_formosus
ENSLBEG00000009167	parn	99	87.797	ENSSMAG00000000685	parn	91	88.346	Scophthalmus_maximus
ENSLBEG00000009167	parn	100	89.984	ENSSDUG00000014555	parn	93	90.297	Seriola_dumerili
ENSLBEG00000009167	parn	68	79.770	ENSSARG00000014339	PARN	75	79.770	Sorex_araneus
ENSLBEG00000009167	parn	90	72.222	ENSSPUG00000007719	PARN	92	72.222	Sphenodon_punctatus
ENSLBEG00000009167	parn	100	89.498	ENSSPAG00000007095	parn	93	89.498	Stegastes_partitus
ENSLBEG00000009167	parn	89	72.931	ENSSSCG00000007878	PARN	80	72.931	Sus_scrofa
ENSLBEG00000009167	parn	88	72.366	ENSTGUG00000004971	PARN	96	69.355	Taeniopygia_guttata
ENSLBEG00000009167	parn	89	87.873	ENSTNIG00000008252	parn	90	88.401	Tetraodon_nigroviridis
ENSLBEG00000009167	parn	80	61.437	ENSTBEG00000010407	PARN	90	61.437	Tupaia_belangeri
ENSLBEG00000009167	parn	87	69.110	ENSTTRG00000002843	PARN	90	69.110	Tursiops_truncatus
ENSLBEG00000009167	parn	62	30.000	ENSTTRG00000010409	PNLDC1	72	30.000	Tursiops_truncatus
ENSLBEG00000009167	parn	68	70.252	ENSUAMG00000008283	PARN	94	66.590	Ursus_americanus
ENSLBEG00000009167	parn	90	71.669	ENSUMAG00000004527	PARN	92	71.669	Ursus_maritimus
ENSLBEG00000009167	parn	88	69.913	ENSVPAG00000008968	PARN	93	69.913	Vicugna_pacos
ENSLBEG00000009167	parn	90	71.501	ENSVVUG00000019509	PARN	92	71.501	Vulpes_vulpes
ENSLBEG00000009167	parn	89	70.377	ENSXETG00000010994	parn	100	75.660	Xenopus_tropicalis
ENSLBEG00000009167	parn	93	81.407	ENSXCOG00000015990	parn	99	81.240	Xiphophorus_couchianus
ENSLBEG00000009167	parn	99	83.568	ENSXMAG00000014783	parn	93	83.568	Xiphophorus_maculatus