EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLBEG00000009235 (Gene tree)
Gene ID
-
Gene Symbol
LSM5 (1 of many)
Alias
YER146W
Full Name
U6 snRNA-associated Sm-like protein LSm5
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Plus strand
Length
5811 bases
Position
chrFKLU01001578.1:10498-16308
Accession
110004495
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000011983LSMPF01423.223.1e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000012605LSM5 (1 of many)-2014347XM_020660026ENSLBEP00000011983127 (aa)XP_020515682-
Gene Model
Click here to download ENSLBEG00000009235's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000009235's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000009235LSM57086.813ENSG00000106355LSM510086.813Homo_sapiens
ENSLBEG00000009235LSM56597.561ENSAPOG00000020779LSM59696.341Acanthochromis_polyacanthus
ENSLBEG00000009235LSM56597.561ENSAPOG00000011743LSM59297.561Acanthochromis_polyacanthus
ENSLBEG00000009235LSM57086.813ENSAMEG00000006700LSM510086.813Ailuropoda_melanoleuca
ENSLBEG00000009235LSM56155.128ENSACIG00000019185lsm58255.128Amphilophus_citrinellus
ENSLBEG00000009235LSM57089.011ENSAOCG00000001636lsm510089.011Amphiprion_ocellaris
ENSLBEG00000009235LSM57089.011ENSAPEG00000008151lsm510089.011Amphiprion_percula
ENSLBEG00000009235LSM57688.542ENSATEG00000020470lsm57188.542Anabas_testudineus
ENSLBEG00000009235LSM55397.015ENSAPLG00000008171LSM59197.015Anas_platyrhynchos
ENSLBEG00000009235LSM56571.084ENSANAG00000037758-9071.084Aotus_nancymaae
ENSLBEG00000009235LSM56984.444ENSANAG00000024192-9484.444Aotus_nancymaae
ENSLBEG00000009235LSM57087.912ENSANAG00000034409-10087.912Aotus_nancymaae
ENSLBEG00000009235LSM56198.701ENSACLG00000012891lsm58898.701Astatotilapia_calliptera
ENSLBEG00000009235LSM56581.176ENSAMXG00000035543lsm59081.176Astyanax_mexicanus
ENSLBEG00000009235LSM57086.813ENSBTAG00000002332LSM510086.813Bos_taurus
ENSLBEG00000009235LSM57065.934WBGene00003079lsm-510065.934Caenorhabditis_elegans
ENSLBEG00000009235LSM56977.528ENSCJAG00000005678-10077.528Callithrix_jacchus
ENSLBEG00000009235LSM56593.902ENSCJAG00000047379LSM58184.615Callithrix_jacchus
ENSLBEG00000009235LSM56395.000ENSCAFG00000019261-8895.000Canis_familiaris
ENSLBEG00000009235LSM57086.813ENSCAFG00020004946LSM510086.813Canis_lupus_dingo
ENSLBEG00000009235LSM57086.813ENSCHIG00000024539LSM510086.813Capra_hircus
ENSLBEG00000009235LSM57084.615ENSCHIG00000004079-10084.615Capra_hircus
ENSLBEG00000009235LSM55872.973ENSCHIG00000021428-8974.359Capra_hircus
ENSLBEG00000009235LSM57074.725ENSTSYG00000028728-10074.725Carlito_syrichta
ENSLBEG00000009235LSM57069.231ENSTSYG00000026530-9169.231Carlito_syrichta
ENSLBEG00000009235LSM57063.736ENSTSYG00000036637-10063.736Carlito_syrichta
ENSLBEG00000009235LSM57086.813ENSTSYG00000006449-10086.813Carlito_syrichta
ENSLBEG00000009235LSM55198.462ENSCAPG00000006980LSM58798.462Cavia_aperea
ENSLBEG00000009235LSM57086.813ENSCPOG00000036386LSM510086.813Cavia_porcellus
ENSLBEG00000009235LSM57084.615ENSCCAG00000032123-10084.615Cebus_capucinus
ENSLBEG00000009235LSM57085.714ENSCCAG00000000821-10085.714Cebus_capucinus
ENSLBEG00000009235LSM56560.241ENSCCAG00000037334-9060.241Cebus_capucinus
ENSLBEG00000009235LSM57086.813ENSCCAG00000037808-10086.813Cebus_capucinus
ENSLBEG00000009235LSM57068.132ENSCCAG00000032792-10068.132Cebus_capucinus
ENSLBEG00000009235LSM56482.716ENSCATG00000014790-9590.909Cercocebus_atys
ENSLBEG00000009235LSM57086.813ENSCATG00000040218LSM510086.813Cercocebus_atys
ENSLBEG00000009235LSM57086.813ENSCLAG00000000202LSM510086.813Chinchilla_lanigera
ENSLBEG00000009235LSM57072.527ENSCLAG00000005062-9072.527Chinchilla_lanigera
ENSLBEG00000009235LSM55994.667ENSCHOG00000005335LSM59994.667Choloepus_hoffmanni
ENSLBEG00000009235LSM57086.813ENSCPBG00000013685LSM510086.813Chrysemys_picta_bellii
ENSLBEG00000009235LSM56680.233ENSCING00000020625-9780.233Ciona_intestinalis
ENSLBEG00000009235LSM56680.233ENSCSAVG00000001439-9880.233Ciona_savignyi
ENSLBEG00000009235LSM57086.813ENSCANG00000039909LSM510086.813Colobus_angolensis_palliatus
ENSLBEG00000009235LSM57086.813ENSCGRG00001015461Lsm510086.813Cricetulus_griseus_chok1gshd
ENSLBEG00000009235LSM55788.000ENSCGRG00000007677Lsm510088.000Cricetulus_griseus_crigri
ENSLBEG00000009235LSM56554.217ENSCSEG00000015286lsm58654.217Cynoglossus_semilaevis
ENSLBEG00000009235LSM56598.780ENSCVAG00000004262lsm59098.780Cyprinodon_variegatus
ENSLBEG00000009235LSM57087.912ENSDARG00000071573lsm510087.912Danio_rerio
ENSLBEG00000009235LSM56581.928ENSDNOG00000049495-9181.928Dasypus_novemcinctus
ENSLBEG00000009235LSM56595.122ENSDNOG00000034958LSM59295.122Dasypus_novemcinctus
ENSLBEG00000009235LSM57086.813ENSDORG00000009422Lsm510086.813Dipodomys_ordii
ENSLBEG00000009235LSM56579.268FBgn0035675CG66109079.268Drosophila_melanogaster
ENSLBEG00000009235LSM56966.667ENSETEG00000001469-9966.667Echinops_telfairi
ENSLBEG00000009235LSM55077.778ENSETEG00000016074-8177.778Echinops_telfairi
ENSLBEG00000009235LSM56363.750ENSETEG00000000777-9163.750Echinops_telfairi
ENSLBEG00000009235LSM57086.813ENSETEG00000018068LSM510086.813Echinops_telfairi
ENSLBEG00000009235LSM56968.539ENSETEG00000010651-9968.539Echinops_telfairi
ENSLBEG00000009235LSM56592.683ENSEBUG00000008540lsm59092.683Eptatretus_burgeri
ENSLBEG00000009235LSM57086.813ENSEASG00005003500LSM510086.813Equus_asinus_asinus
ENSLBEG00000009235LSM56578.049ENSECAG00000018445LSM58978.049Equus_caballus
ENSLBEG00000009235LSM56596.341ENSELUG00000007792lsm510090.110Esox_lucius
ENSLBEG00000009235LSM57086.813ENSFCAG00000000230LSM510086.813Felis_catus
ENSLBEG00000009235LSM55397.015ENSFALG00000001892LSM58197.015Ficedula_albicollis
ENSLBEG00000009235LSM57086.813ENSFDAG00000008767LSM510086.813Fukomys_damarensis
ENSLBEG00000009235LSM55867.568ENSFDAG00000008685-8867.568Fukomys_damarensis
ENSLBEG00000009235LSM55385.075ENSFHEG00000004011lsm57285.075Fundulus_heteroclitus
ENSLBEG00000009235LSM56598.780ENSGMOG00000018235lsm59198.780Gadus_morhua
ENSLBEG00000009235LSM57086.813ENSGALG00000041625LSM510086.813Gallus_gallus
ENSLBEG00000009235LSM56597.561ENSGACG00000005528lsm59097.561Gasterosteus_aculeatus
ENSLBEG00000009235LSM56595.122ENSGAGG00000015593LSM510086.813Gopherus_agassizii
ENSLBEG00000009235LSM57086.813ENSGGOG00000043469LSM510086.813Gorilla_gorilla
ENSLBEG00000009235LSM56198.701ENSHBUG00000013773lsm58898.701Haplochromis_burtoni
ENSLBEG00000009235LSM57086.813ENSHGLG00000011765LSM510086.813Heterocephalus_glaber_female
ENSLBEG00000009235LSM57083.516ENSHGLG00100015610LSM510083.516Heterocephalus_glaber_male
ENSLBEG00000009235LSM57051.648ENSHCOG00000008288lsm510051.648Hippocampus_comes
ENSLBEG00000009235LSM56596.341ENSIPUG00000021095LSM59096.341Ictalurus_punctatus
ENSLBEG00000009235LSM57086.813ENSSTOG00000012662LSM510086.813Ictidomys_tridecemlineatus
ENSLBEG00000009235LSM56079.487ENSSTOG00000033886-8879.487Ictidomys_tridecemlineatus
ENSLBEG00000009235LSM57084.615ENSJJAG00000012145-10084.615Jaculus_jaculus
ENSLBEG00000009235LSM56287.342ENSJJAG00000004475-10087.342Jaculus_jaculus
ENSLBEG00000009235LSM57064.835ENSJJAG00000016144-9264.835Jaculus_jaculus
ENSLBEG00000009235LSM57087.912ENSKMAG00000021861lsm510087.912Kryptolebias_marmoratus
ENSLBEG00000009235LSM56595.122ENSLACG00000022448LSM59095.122Latimeria_chalumnae
ENSLBEG00000009235LSM57089.011ENSLOCG00000012903lsm510089.011Lepisosteus_oculatus
ENSLBEG00000009235LSM56568.293ENSLAFG00000027938-8968.293Loxodonta_africana
ENSLBEG00000009235LSM57086.813ENSLAFG00000029579LSM510086.813Loxodonta_africana
ENSLBEG00000009235LSM57086.813ENSMFAG00000038508LSM510086.813Macaca_fascicularis
ENSLBEG00000009235LSM57084.615ENSMFAG00000030152-10084.615Macaca_fascicularis
ENSLBEG00000009235LSM56976.667ENSMMUG00000039822-10076.667Macaca_mulatta
ENSLBEG00000009235LSM57084.615ENSMMUG00000030131-10084.615Macaca_mulatta
ENSLBEG00000009235LSM57086.813ENSMNEG00000015331LSM510086.813Macaca_nemestrina
ENSLBEG00000009235LSM57084.615ENSMNEG00000037935-10084.615Macaca_nemestrina
ENSLBEG00000009235LSM57086.813ENSMLEG00000024945LSM510086.813Mandrillus_leucophaeus
ENSLBEG00000009235LSM56381.250ENSMLEG00000034037-8981.250Mandrillus_leucophaeus
ENSLBEG00000009235LSM57082.418ENSMAMG00000012869lsm510082.418Mastacembelus_armatus
ENSLBEG00000009235LSM56198.701ENSMZEG00005019554lsm58898.701Maylandia_zebra
ENSLBEG00000009235LSM57086.813ENSMGAG00000012117LSM510086.813Meleagris_gallopavo
ENSLBEG00000009235LSM57086.813ENSMAUG00000012222Lsm510086.813Mesocricetus_auratus
ENSLBEG00000009235LSM57085.714ENSMAUG00000008132-10085.714Mesocricetus_auratus
ENSLBEG00000009235LSM57086.813ENSMICG00000005353LSM510086.813Microcebus_murinus
ENSLBEG00000009235LSM57264.516ENSMICG00000033928-10064.516Microcebus_murinus
ENSLBEG00000009235LSM57086.813ENSMOCG00000012018Lsm510086.813Microtus_ochrogaster
ENSLBEG00000009235LSM55398.507ENSMMOG00000004026lsm57798.507Mola_mola
ENSLBEG00000009235LSM57086.813MGP_CAROLIEiJ_G0028421Lsm59597.500Mus_caroli
ENSLBEG00000009235LSM57086.813ENSMUSG00000091625Lsm59597.500Mus_musculus
ENSLBEG00000009235LSM57086.813MGP_PahariEiJ_G0022171Lsm59597.500Mus_pahari
ENSLBEG00000009235LSM57086.813MGP_SPRETEiJ_G0029423Lsm59597.500Mus_spretus
ENSLBEG00000009235LSM57086.813ENSMLUG00000017028LSM510086.813Myotis_lucifugus
ENSLBEG00000009235LSM57086.813ENSNGAG00000024142Lsm510086.813Nannospalax_galili
ENSLBEG00000009235LSM56572.289ENSNGAG00000022569-8872.289Nannospalax_galili
ENSLBEG00000009235LSM56580.952ENSNGAG00000017707-9080.952Nannospalax_galili
ENSLBEG00000009235LSM57086.813ENSNLEG00000015268LSM510086.813Nomascus_leucogenys
ENSLBEG00000009235LSM55788.000ENSOPRG00000002443LSM510088.000Ochotona_princeps
ENSLBEG00000009235LSM57086.813ENSODEG00000008258-10086.813Octodon_degus
ENSLBEG00000009235LSM57086.813ENSODEG00000019072-10086.813Octodon_degus
ENSLBEG00000009235LSM55558.571ENSOANG00000014540-9358.571Ornithorhynchus_anatinus
ENSLBEG00000009235LSM57086.813ENSOCUG00000029043LSM510086.813Oryctolagus_cuniculus
ENSLBEG00000009235LSM56694.048ENSORLG00000027725lsm55494.048Oryzias_latipes
ENSLBEG00000009235LSM56597.561ENSORLG00020003019lsm58197.561Oryzias_latipes_hni
ENSLBEG00000009235LSM56596.341ENSORLG00015003338lsm59096.341Oryzias_latipes_hsok
ENSLBEG00000009235LSM56595.122ENSOMEG00000001078lsm59095.122Oryzias_melastigma
ENSLBEG00000009235LSM57086.813ENSOGAG00000013892LSM510086.813Otolemur_garnettii
ENSLBEG00000009235LSM57086.813ENSOARG00000006944LSM510086.813Ovis_aries
ENSLBEG00000009235LSM57086.813ENSPPAG00000003697-10086.813Pan_paniscus
ENSLBEG00000009235LSM57086.813ENSPPRG00000002550LSM510086.813Panthera_pardus
ENSLBEG00000009235LSM57086.813ENSPTIG00000015604LSM510086.813Panthera_tigris_altaica
ENSLBEG00000009235LSM57086.813ENSPTRG00000019057LSM510086.813Pan_troglodytes
ENSLBEG00000009235LSM56575.610ENSPTRG00000049488-9078.049Pan_troglodytes
ENSLBEG00000009235LSM57083.516ENSPANG00000033477-10083.516Papio_anubis
ENSLBEG00000009235LSM57086.813ENSPANG00000032179-10086.813Papio_anubis
ENSLBEG00000009235LSM56976.667ENSPANG00000032538-10076.667Papio_anubis
ENSLBEG00000009235LSM57089.011ENSPKIG00000011910lsm510089.011Paramormyrops_kingsleyae
ENSLBEG00000009235LSM55397.015ENSPSIG00000014796LSM59197.015Pelodiscus_sinensis
ENSLBEG00000009235LSM56565.060ENSPEMG00000022375-9065.060Peromyscus_maniculatus_bairdii
ENSLBEG00000009235LSM56598.780ENSPFOG00000001433lsm59098.780Poecilia_formosa
ENSLBEG00000009235LSM56598.780ENSPLAG00000009665lsm59098.780Poecilia_latipinna
ENSLBEG00000009235LSM56598.780ENSPMEG00000022265lsm59098.780Poecilia_mexicana
ENSLBEG00000009235LSM57083.516ENSPPYG00000017661LSM510083.516Pongo_abelii
ENSLBEG00000009235LSM56495.062ENSPCAG00000013740LSM510095.062Procavia_capensis
ENSLBEG00000009235LSM57086.813ENSPVAG00000009786LSM510086.813Pteropus_vampyrus
ENSLBEG00000009235LSM56198.701ENSPNYG00000022236lsm58898.701Pundamilia_nyererei
ENSLBEG00000009235LSM56596.341ENSPNAG00000001887lsm59096.341Pygocentrus_nattereri
ENSLBEG00000009235LSM57086.813ENSRNOG00000042126Lsm510086.813Rattus_norvegicus
ENSLBEG00000009235LSM57083.696ENSRNOG00000027305AABR07065089.110083.696Rattus_norvegicus
ENSLBEG00000009235LSM57086.813ENSRBIG00000027803-10086.813Rhinopithecus_bieti
ENSLBEG00000009235LSM57086.813ENSRBIG00000030714-10086.813Rhinopithecus_bieti
ENSLBEG00000009235LSM57085.714ENSRBIG00000024431-10085.714Rhinopithecus_bieti
ENSLBEG00000009235LSM57086.813ENSRBIG00000030340-10086.813Rhinopithecus_bieti
ENSLBEG00000009235LSM57086.813ENSRROG00000042782-10086.813Rhinopithecus_roxellana
ENSLBEG00000009235LSM57086.813ENSRROG00000004655-10086.813Rhinopithecus_roxellana
ENSLBEG00000009235LSM57086.813ENSRROG00000023884-10086.813Rhinopithecus_roxellana
ENSLBEG00000009235LSM55746.154YER146W-8446.154Saccharomyces_cerevisiae
ENSLBEG00000009235LSM56592.683ENSSBOG00000019124-9092.683Saimiri_boliviensis_boliviensis
ENSLBEG00000009235LSM57086.813ENSSBOG00000012312LSM510086.813Saimiri_boliviensis_boliviensis
ENSLBEG00000009235LSM57064.835ENSSBOG00000034794-10064.835Saimiri_boliviensis_boliviensis
ENSLBEG00000009235LSM57089.011ENSSFOG00015010099lsm510089.011Scleropages_formosus
ENSLBEG00000009235LSM56556.627ENSSMAG00000007895lsm58656.627Scophthalmus_maximus
ENSLBEG00000009235LSM56275.000ENSSLDG00000008014-9575.000Seriola_lalandi_dorsalis
ENSLBEG00000009235LSM57090.110ENSSLDG00000025242lsm510090.110Seriola_lalandi_dorsalis
ENSLBEG00000009235LSM57084.615ENSSPUG00000002690LSM510084.615Sphenodon_punctatus
ENSLBEG00000009235LSM57052.747ENSSPAG00000005435lsm510052.747Stegastes_partitus
ENSLBEG00000009235LSM57086.813ENSSSCG00000026064-10086.813Sus_scrofa
ENSLBEG00000009235LSM55484.058ENSSSCG00000029661-9684.058Sus_scrofa
ENSLBEG00000009235LSM57085.714ENSTGUG00000017539LSM510085.714Taeniopygia_guttata
ENSLBEG00000009235LSM56191.463ENSTRUG00000017749lsm56491.463Takifugu_rubripes
ENSLBEG00000009235LSM56689.535ENSTNIG00000008695lsm59889.535Tetraodon_nigroviridis
ENSLBEG00000009235LSM57086.813ENSTBEG00000004876LSM510086.813Tupaia_belangeri
ENSLBEG00000009235LSM57086.813ENSTTRG00000004237LSM510086.813Tursiops_truncatus
ENSLBEG00000009235LSM56593.902ENSUMAG00000002625LSM55993.902Ursus_maritimus
ENSLBEG00000009235LSM57086.813ENSVPAG00000009985LSM510086.813Vicugna_pacos
ENSLBEG00000009235LSM57086.813ENSVVUG00000021311LSM510086.813Vulpes_vulpes
ENSLBEG00000009235LSM56595.122ENSXETG00000026465lsm510095.122Xenopus_tropicalis
ENSLBEG00000009235LSM56598.780ENSXMAG00000029988lsm59098.780Xiphophorus_maculatus

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