EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000009252 (Gene tree)
Gene ID: 109997555
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 8106 bases
Position: chrFKLU01000425.1:314715-322820
Accession: 109997555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000012025	MA3	PF02847.17	2.4e-21	1	1
ENSLBEP00000012025	MIF4G	PF02854.19	8.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000012647	-	3111	XM_020652075	ENSLBEP00000012025	857 (aa)	XP_020507731	UPI0009B2EB95

Gene Model

Click here to download ENSLBEG00000009252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000009252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000009252	nom1	63	87.085	ENSAPOG00000012073	nom1	98	75.439	Acanthochromis_polyacanthus
ENSLBEG00000009252	nom1	82	55.649	ENSAMEG00000001412	NOM1	75	63.469	Ailuropoda_melanoleuca
ENSLBEG00000009252	nom1	95	79.626	ENSACIG00000018050	nom1	94	87.619	Amphilophus_citrinellus
ENSLBEG00000009252	nom1	98	75.467	ENSAOCG00000006229	nom1	98	74.622	Amphiprion_ocellaris
ENSLBEG00000009252	nom1	98	75.995	ENSAPEG00000015994	nom1	98	75.761	Amphiprion_percula
ENSLBEG00000009252	nom1	66	84.698	ENSATEG00000005405	nom1	98	75.352	Anabas_testudineus
ENSLBEG00000009252	nom1	80	57.736	ENSAPLG00000006585	NOM1	81	66.290	Anas_platyrhynchos
ENSLBEG00000009252	nom1	80	56.509	ENSACAG00000011192	NOM1	62	65.666	Anolis_carolinensis
ENSLBEG00000009252	nom1	100	72.152	ENSACLG00000000033	nom1	98	71.663	Astatotilapia_calliptera
ENSLBEG00000009252	nom1	62	74.151	ENSAMXG00000041486	nom1	61	74.291	Astyanax_mexicanus
ENSLBEG00000009252	nom1	98	52.214	ENSCJAG00000004336	NOM1	61	68.260	Callithrix_jacchus
ENSLBEG00000009252	nom1	61	68.199	ENSCAPG00000016273	NOM1	99	68.008	Cavia_aperea
ENSLBEG00000009252	nom1	98	49.651	ENSCPOG00000025538	NOM1	85	63.498	Cavia_porcellus
ENSLBEG00000009252	nom1	89	68.009	ENSCCAG00000014944	NOM1	99	68.272	Cebus_capucinus
ENSLBEG00000009252	nom1	86	55.182	ENSCLAG00000000267	NOM1	62	65.660	Chinchilla_lanigera
ENSLBEG00000009252	nom1	68	69.187	ENSCPBG00000018215	NOM1	80	69.187	Chrysemys_picta_bellii
ENSLBEG00000009252	nom1	60	39.347	ENSCING00000005248	-	70	39.347	Ciona_intestinalis
ENSLBEG00000009252	nom1	61	68.069	ENSCANG00000041984	NOM1	89	68.330	Colobus_angolensis_palliatus
ENSLBEG00000009252	nom1	82	56.923	ENSCGRG00001020293	Nom1	62	66.105	Cricetulus_griseus_chok1gshd
ENSLBEG00000009252	nom1	60	67.692	ENSCGRG00000005405	Nom1	97	67.692	Cricetulus_griseus_crigri
ENSLBEG00000009252	nom1	94	68.299	ENSCSEG00000000932	nom1	94	68.221	Cynoglossus_semilaevis
ENSLBEG00000009252	nom1	100	70.534	ENSCVAG00000007562	nom1	100	68.914	Cyprinodon_variegatus
ENSLBEG00000009252	nom1	62	75.236	ENSDARG00000060027	nom1	100	75.000	Danio_rerio
ENSLBEG00000009252	nom1	61	56.333	ENSDORG00000015682	Nom1	87	61.818	Dipodomys_ordii
ENSLBEG00000009252	nom1	58	39.961	FBgn0035336	CG9004	59	39.961	Drosophila_melanogaster
ENSLBEG00000009252	nom1	56	56.897	ENSETEG00000003104	NOM1	72	56.028	Echinops_telfairi
ENSLBEG00000009252	nom1	51	50.227	ENSEBUG00000010077	nom1	96	50.227	Eptatretus_burgeri
ENSLBEG00000009252	nom1	82	58.509	ENSEASG00005001489	NOM1	61	67.593	Equus_asinus_asinus
ENSLBEG00000009252	nom1	64	66.606	ENSECAG00000007596	NOM1	57	67.407	Equus_caballus
ENSLBEG00000009252	nom1	63	80.295	ENSELUG00000006266	nom1	62	82.163	Esox_lucius
ENSLBEG00000009252	nom1	82	57.865	ENSFALG00000006904	NOM1	78	65.448	Ficedula_albicollis
ENSLBEG00000009252	nom1	98	50.865	ENSFDAG00000016241	NOM1	63	66.157	Fukomys_damarensis
ENSLBEG00000009252	nom1	98	71.074	ENSFHEG00000015974	nom1	64	83.712	Fundulus_heteroclitus
ENSLBEG00000009252	nom1	94	62.285	ENSGMOG00000005129	nom1	67	75.143	Gadus_morhua
ENSLBEG00000009252	nom1	99	49.371	ENSGALG00000006437	NOM1	62	62.522	Gallus_gallus
ENSLBEG00000009252	nom1	100	71.247	ENSGAFG00000003211	nom1	100	68.512	Gambusia_affinis
ENSLBEG00000009252	nom1	87	56.000	ENSGAGG00000014347	NOM1	62	68.620	Gopherus_agassizii
ENSLBEG00000009252	nom1	100	72.023	ENSHBUG00000014616	nom1	98	72.071	Haplochromis_burtoni
ENSLBEG00000009252	nom1	98	52.546	ENSHGLG00000007392	NOM1	60	67.686	Heterocephalus_glaber_female
ENSLBEG00000009252	nom1	86	67.937	ENSHGLG00100014407	NOM1	60	67.686	Heterocephalus_glaber_male
ENSLBEG00000009252	nom1	62	71.992	ENSIPUG00000013980	nom1	63	71.992	Ictalurus_punctatus
ENSLBEG00000009252	nom1	64	65.149	ENSSTOG00000031736	NOM1	95	66.728	Ictidomys_tridecemlineatus
ENSLBEG00000009252	nom1	57	69.467	ENSJJAG00000011716	Nom1	98	69.467	Jaculus_jaculus
ENSLBEG00000009252	nom1	84	61.103	ENSLACG00000011777	NOM1	64	69.663	Latimeria_chalumnae
ENSLBEG00000009252	nom1	98	61.833	ENSLOCG00000012452	nom1	66	76.822	Lepisosteus_oculatus
ENSLBEG00000009252	nom1	84	59.853	ENSLAFG00000007119	NOM1	89	59.853	Loxodonta_africana
ENSLBEG00000009252	nom1	97	50.879	ENSMMUG00000039033	NOM1	61	63.469	Macaca_mulatta
ENSLBEG00000009252	nom1	61	68.069	ENSMLEG00000037062	NOM1	98	68.330	Mandrillus_leucophaeus
ENSLBEG00000009252	nom1	98	74.471	ENSMAMG00000004118	nom1	98	73.081	Mastacembelus_armatus
ENSLBEG00000009252	nom1	100	72.434	ENSMZEG00005000384	nom1	98	71.663	Maylandia_zebra
ENSLBEG00000009252	nom1	66	62.676	ENSMGAG00000005051	NOM1	78	63.388	Meleagris_gallopavo
ENSLBEG00000009252	nom1	99	69.213	ENSMMOG00000004419	nom1	98	67.768	Mola_mola
ENSLBEG00000009252	nom1	63	67.824	ENSMODG00000005177	NOM1	64	68.073	Monodelphis_domestica
ENSLBEG00000009252	nom1	93	73.243	ENSMALG00000008800	nom1	98	72.615	Monopterus_albus
ENSLBEG00000009252	nom1	97	51.639	ENSMUSG00000001569	Nom1	61	66.346	Mus_musculus
ENSLBEG00000009252	nom1	97	51.051	MGP_SPRETEiJ_G0028039	Nom1	61	66.346	Mus_spretus
ENSLBEG00000009252	nom1	65	60.000	ENSMPUG00000009745	NOM1	75	63.985	Mustela_putorius_furo
ENSLBEG00000009252	nom1	71	61.741	ENSMLUG00000009129	NOM1	93	64.716	Myotis_lucifugus
ENSLBEG00000009252	nom1	100	73.472	ENSNBRG00000016429	nom1	95	85.472	Neolamprologus_brichardi
ENSLBEG00000009252	nom1	53	69.149	ENSMEUG00000001108	NOM1	52	71.756	Notamacropus_eugenii
ENSLBEG00000009252	nom1	54	52.537	ENSOPRG00000014676	NOM1	51	56.250	Ochotona_princeps
ENSLBEG00000009252	nom1	82	56.540	ENSODEG00000009399	NOM1	75	66.157	Octodon_degus
ENSLBEG00000009252	nom1	94	72.817	ENSONIG00000005958	nom1	100	72.161	Oreochromis_niloticus
ENSLBEG00000009252	nom1	54	67.241	ENSOANG00000006139	-	97	67.241	Ornithorhynchus_anatinus
ENSLBEG00000009252	nom1	94	53.916	ENSOCUG00000021448	-	93	53.846	Oryctolagus_cuniculus
ENSLBEG00000009252	nom1	100	72.261	ENSORLG00000010541	nom1	98	72.071	Oryzias_latipes
ENSLBEG00000009252	nom1	93	72.362	ENSORLG00020010789	nom1	100	71.606	Oryzias_latipes_hni
ENSLBEG00000009252	nom1	100	71.795	ENSORLG00015010475	nom1	100	71.895	Oryzias_latipes_hsok
ENSLBEG00000009252	nom1	100	73.108	ENSOMEG00000004219	nom1	98	71.093	Oryzias_melastigma
ENSLBEG00000009252	nom1	60	69.098	ENSOGAG00000001124	NOM1	85	69.098	Otolemur_garnettii
ENSLBEG00000009252	nom1	97	53.302	ENSPPAG00000041374	NOM1	60	68.906	Pan_paniscus
ENSLBEG00000009252	nom1	97	53.302	ENSPTRG00000019917	NOM1	60	68.906	Pan_troglodytes
ENSLBEG00000009252	nom1	97	53.341	ENSPANG00000007605	NOM1	63	66.236	Papio_anubis
ENSLBEG00000009252	nom1	100	59.977	ENSPKIG00000005825	nom1	65	70.956	Paramormyrops_kingsleyae
ENSLBEG00000009252	nom1	64	67.391	ENSPSIG00000017848	NOM1	91	67.577	Pelodiscus_sinensis
ENSLBEG00000009252	nom1	98	68.925	ENSPMGG00000002577	nom1	65	84.630	Periophthalmus_magnuspinnatus
ENSLBEG00000009252	nom1	98	51.860	ENSPCIG00000027941	NOM1	60	66.543	Phascolarctos_cinereus
ENSLBEG00000009252	nom1	99	72.145	ENSPFOG00000015771	nom1	99	70.941	Poecilia_formosa
ENSLBEG00000009252	nom1	63	82.900	ENSPLAG00000007856	nom1	66	82.900	Poecilia_latipinna
ENSLBEG00000009252	nom1	99	72.261	ENSPMEG00000014155	nom1	99	70.941	Poecilia_mexicana
ENSLBEG00000009252	nom1	100	71.694	ENSPREG00000008850	nom1	100	69.346	Poecilia_reticulata
ENSLBEG00000009252	nom1	97	49.591	ENSPPYG00000018222	NOM1	84	60.886	Pongo_abelii
ENSLBEG00000009252	nom1	73	62.413	ENSPCAG00000000440	NOM1	78	62.413	Procavia_capensis
ENSLBEG00000009252	nom1	61	67.304	ENSPCOG00000015222	NOM1	98	67.562	Propithecus_coquereli
ENSLBEG00000009252	nom1	97	50.941	ENSPVAG00000014760	NOM1	62	65.056	Pteropus_vampyrus
ENSLBEG00000009252	nom1	100	72.203	ENSPNYG00000006975	nom1	98	83.272	Pundamilia_nyererei
ENSLBEG00000009252	nom1	64	71.767	ENSPNAG00000011085	nom1	61	71.664	Pygocentrus_nattereri
ENSLBEG00000009252	nom1	98	53.380	ENSRBIG00000037042	NOM1	62	66.852	Rhinopithecus_bieti
ENSLBEG00000009252	nom1	98	53.747	ENSRROG00000037293	NOM1	62	66.852	Rhinopithecus_roxellana
ENSLBEG00000009252	nom1	52	58.093	ENSSHAG00000002835	-	99	62.560	Sarcophilus_harrisii
ENSLBEG00000009252	nom1	82	57.302	ENSSHAG00000017998	-	72	67.407	Sarcophilus_harrisii
ENSLBEG00000009252	nom1	57	73.511	ENSSFOG00015003196	nom1	100	73.511	Scleropages_formosus
ENSLBEG00000009252	nom1	100	74.453	ENSSMAG00000011047	nom1	98	74.061	Scophthalmus_maximus
ENSLBEG00000009252	nom1	100	77.906	ENSSDUG00000006834	nom1	100	77.304	Seriola_dumerili
ENSLBEG00000009252	nom1	100	76.985	ENSSLDG00000021812	nom1	100	76.613	Seriola_lalandi_dorsalis
ENSLBEG00000009252	nom1	84	50.068	ENSSPUG00000002556	NOM1	97	55.970	Sphenodon_punctatus
ENSLBEG00000009252	nom1	100	76.853	ENSSPAG00000000953	nom1	100	75.882	Stegastes_partitus
ENSLBEG00000009252	nom1	82	56.540	ENSTGUG00000000702	-	76	65.977	Taeniopygia_guttata
ENSLBEG00000009252	nom1	98	71.765	ENSTRUG00000010239	nom1	98	71.244	Takifugu_rubripes
ENSLBEG00000009252	nom1	98	69.438	ENSTNIG00000012783	nom1	100	68.788	Tetraodon_nigroviridis
ENSLBEG00000009252	nom1	97	50.232	ENSUAMG00000025450	NOM1	62	64.037	Ursus_americanus
ENSLBEG00000009252	nom1	83	55.433	ENSUMAG00000014275	NOM1	98	54.484	Ursus_maritimus
ENSLBEG00000009252	nom1	82	55.994	ENSVVUG00000002608	NOM1	60	65.517	Vulpes_vulpes
ENSLBEG00000009252	nom1	88	55.033	ENSXETG00000021611	nom1	82	74.146	Xenopus_tropicalis
ENSLBEG00000009252	nom1	98	72.471	ENSXMAG00000002451	nom1	98	69.529	Xiphophorus_maculatus