EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000009422 (Gene tree)
Gene ID: 109984910
Gene Symbol: -
Alias: apo2b
Full Name: probable C->U-editing enzyme APOBEC-2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6052 bases
Position: chrFKLU01000076.1:645144-651195
Accession: 109984910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000012238	APOBEC_N	PF08210.11	2.6e-45	1	1
ENSLBEP00000012238	APOBEC_C	PF05240.14	1.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000012873	-	2574	XM_020635085	ENSLBEP00000012238	280 (aa)	XP_020490741	UPI0009B2FEFA

Gene Model

Click here to download ENSLBEG00000009422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000009422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000009422	-	90	49.804	ENSLBEG00000025214	apobec2a	97	52.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000009422	-	66	58.639	ENSG00000124701	APOBEC2	98	55.251	Homo_sapiens
ENSLBEG00000009422	-	100	77.580	ENSAPOG00000019390	apobec2b	80	83.857	Acanthochromis_polyacanthus
ENSLBEG00000009422	-	62	56.111	ENSAMEG00000004467	APOBEC2	71	56.111	Ailuropoda_melanoleuca
ENSLBEG00000009422	-	75	50.237	ENSACIG00000016370	apobec2a	83	49.765	Amphilophus_citrinellus
ENSLBEG00000009422	-	100	75.714	ENSACIG00000002472	APOBEC2	89	82.511	Amphilophus_citrinellus
ENSLBEG00000009422	-	81	53.879	ENSAOCG00000003291	apobec2a	93	53.913	Amphiprion_ocellaris
ENSLBEG00000009422	-	100	77.936	ENSAOCG00000023355	apobec2b	100	76.786	Amphiprion_ocellaris
ENSLBEG00000009422	-	100	78.092	ENSAPEG00000004591	apobec2b	100	74.643	Amphiprion_percula
ENSLBEG00000009422	-	85	53.527	ENSAPEG00000003630	apobec2a	93	53.478	Amphiprion_percula
ENSLBEG00000009422	-	87	52.000	ENSATEG00000000956	apobec2a	98	57.714	Anabas_testudineus
ENSLBEG00000009422	-	100	75.089	ENSATEG00000023043	APOBEC2	100	72.500	Anabas_testudineus
ENSLBEG00000009422	-	65	59.574	ENSAPLG00000002895	APOBEC2	98	52.915	Anas_platyrhynchos
ENSLBEG00000009422	-	74	49.321	ENSACAG00000016506	APOBEC2	95	56.742	Anolis_carolinensis
ENSLBEG00000009422	-	66	58.115	ENSANAG00000026993	APOBEC2	98	55.251	Aotus_nancymaae
ENSLBEG00000009422	-	100	72.857	ENSACLG00000007634	APOBEC2	100	72.857	Astatotilapia_calliptera
ENSLBEG00000009422	-	61	56.977	ENSACLG00000026736	-	97	56.977	Astatotilapia_calliptera
ENSLBEG00000009422	-	77	52.252	ENSAMXG00000042992	apobec2a	86	54.260	Astyanax_mexicanus
ENSLBEG00000009422	-	80	57.709	ENSAMXG00000015966	apobec2b	78	57.709	Astyanax_mexicanus
ENSLBEG00000009422	-	66	58.639	ENSBTAG00000005974	APOBEC2	70	53.881	Bos_taurus
ENSLBEG00000009422	-	66	58.115	ENSCJAG00000004063	APOBEC2	98	52.968	Callithrix_jacchus
ENSLBEG00000009422	-	66	58.115	ENSCAFG00000001575	APOBEC2	98	52.511	Canis_familiaris
ENSLBEG00000009422	-	66	58.115	ENSCAFG00020008306	APOBEC2	98	52.511	Canis_lupus_dingo
ENSLBEG00000009422	-	66	57.592	ENSCHIG00000026348	APOBEC2	98	52.968	Capra_hircus
ENSLBEG00000009422	-	66	59.162	ENSTSYG00000008206	APOBEC2	98	54.505	Carlito_syrichta
ENSLBEG00000009422	-	66	58.115	ENSCAPG00000015084	APOBEC2	98	52.915	Cavia_aperea
ENSLBEG00000009422	-	66	58.115	ENSCPOG00000036103	APOBEC2	98	52.915	Cavia_porcellus
ENSLBEG00000009422	-	66	58.115	ENSCCAG00000033987	APOBEC2	98	54.795	Cebus_capucinus
ENSLBEG00000009422	-	66	58.639	ENSCATG00000010691	APOBEC2	98	55.251	Cercocebus_atys
ENSLBEG00000009422	-	66	58.639	ENSCLAG00000013817	APOBEC2	99	52.863	Chinchilla_lanigera
ENSLBEG00000009422	-	66	58.639	ENSCSAG00000011177	APOBEC2	98	55.251	Chlorocebus_sabaeus
ENSLBEG00000009422	-	62	56.667	ENSCHOG00000008930	APOBEC2	100	56.667	Choloepus_hoffmanni
ENSLBEG00000009422	-	64	57.838	ENSCPBG00000017469	APOBEC2	95	53.488	Chrysemys_picta_bellii
ENSLBEG00000009422	-	66	58.639	ENSCANG00000035072	APOBEC2	98	55.251	Colobus_angolensis_palliatus
ENSLBEG00000009422	-	75	52.511	ENSCGRG00001014983	Apobec2	98	52.511	Cricetulus_griseus_chok1gshd
ENSLBEG00000009422	-	75	52.511	ENSCGRG00000007835	Apobec2	98	52.511	Cricetulus_griseus_crigri
ENSLBEG00000009422	-	79	52.679	ENSCSEG00000020201	apobec2a	90	52.444	Cynoglossus_semilaevis
ENSLBEG00000009422	-	67	75.532	ENSCSEG00000000690	-	84	69.058	Cynoglossus_semilaevis
ENSLBEG00000009422	-	100	73.571	ENSCVAG00000012342	apobec2b	100	71.429	Cyprinodon_variegatus
ENSLBEG00000009422	-	85	56.504	ENSDARG00000113992	apobec2b	82	57.333	Danio_rerio
ENSLBEG00000009422	-	66	63.298	ENSDARG00000018881	apobec2a	76	60.000	Danio_rerio
ENSLBEG00000009422	-	66	41.294	ENSDNOG00000033914	APOBEC2	98	38.865	Dasypus_novemcinctus
ENSLBEG00000009422	-	66	57.068	ENSDORG00000006447	Apobec2	98	51.339	Dipodomys_ordii
ENSLBEG00000009422	-	66	57.592	ENSETEG00000000624	APOBEC2	96	52.273	Echinops_telfairi
ENSLBEG00000009422	-	64	52.406	ENSEASG00005002937	APOBEC2	97	52.406	Equus_asinus_asinus
ENSLBEG00000009422	-	74	53.881	ENSECAG00000006576	APOBEC2	98	53.881	Equus_caballus
ENSLBEG00000009422	-	66	59.162	ENSEEUG00000006046	APOBEC2	98	54.338	Erinaceus_europaeus
ENSLBEG00000009422	-	99	49.825	ENSELUG00000003736	apobec2a	78	55.909	Esox_lucius
ENSLBEG00000009422	-	66	58.115	ENSFCAG00000004108	APOBEC2	98	53.881	Felis_catus
ENSLBEG00000009422	-	65	50.000	ENSFALG00000003910	APOBEC2	97	45.133	Ficedula_albicollis
ENSLBEG00000009422	-	66	58.115	ENSFDAG00000006015	APOBEC2	98	53.182	Fukomys_damarensis
ENSLBEG00000009422	-	74	81.643	ENSFHEG00000005492	apobec2b	100	67.500	Fundulus_heteroclitus
ENSLBEG00000009422	-	62	58.523	ENSGMOG00000007028	apobec2a	100	58.523	Gadus_morhua
ENSLBEG00000009422	-	72	73.529	ENSGMOG00000006819	apobec2b	88	70.833	Gadus_morhua
ENSLBEG00000009422	-	65	58.201	ENSGALG00000003226	APOBEC2	99	52.036	Gallus_gallus
ENSLBEG00000009422	-	100	71.429	ENSGAFG00000007634	apobec2b	87	71.429	Gambusia_affinis
ENSLBEG00000009422	-	100	74.286	ENSGACG00000009663	apobec2b	100	83.482	Gasterosteus_aculeatus
ENSLBEG00000009422	-	66	57.979	ENSGACG00000011671	apobec2a	100	57.979	Gasterosteus_aculeatus
ENSLBEG00000009422	-	64	57.838	ENSGAGG00000010347	APOBEC2	99	52.511	Gopherus_agassizii
ENSLBEG00000009422	-	66	58.639	ENSGGOG00000001099	APOBEC2	98	54.667	Gorilla_gorilla
ENSLBEG00000009422	-	85	55.967	ENSHBUG00000015890	apobec2a	90	57.522	Haplochromis_burtoni
ENSLBEG00000009422	-	100	72.143	ENSHBUG00000005993	apobec2b	100	71.429	Haplochromis_burtoni
ENSLBEG00000009422	-	66	57.592	ENSHGLG00000017169	APOBEC2	98	52.466	Heterocephalus_glaber_female
ENSLBEG00000009422	-	66	57.592	ENSHGLG00100019442	APOBEC2	98	52.466	Heterocephalus_glaber_male
ENSLBEG00000009422	-	85	47.967	ENSHCOG00000020319	apobec2a	94	50.000	Hippocampus_comes
ENSLBEG00000009422	-	100	70.877	ENSHCOG00000002712	APOBEC2	80	78.404	Hippocampus_comes
ENSLBEG00000009422	-	100	54.514	ENSIPUG00000013784	Apobec2	81	58.772	Ictalurus_punctatus
ENSLBEG00000009422	-	75	56.422	ENSIPUG00000017355	apobec2a	66	54.468	Ictalurus_punctatus
ENSLBEG00000009422	-	66	59.162	ENSSTOG00000023643	APOBEC2	98	54.338	Ictidomys_tridecemlineatus
ENSLBEG00000009422	-	66	57.592	ENSJJAG00000009733	Apobec2	85	57.592	Jaculus_jaculus
ENSLBEG00000009422	-	99	71.228	ENSKMAG00000020631	apobec2b	99	67.500	Kryptolebias_marmoratus
ENSLBEG00000009422	-	66	62.903	ENSLACG00000015985	APOBEC2	91	57.416	Latimeria_chalumnae
ENSLBEG00000009422	-	70	62.500	ENSLOCG00000012415	apobec2b	77	58.824	Lepisosteus_oculatus
ENSLBEG00000009422	-	66	59.162	ENSLAFG00000016563	APOBEC2	99	53.363	Loxodonta_africana
ENSLBEG00000009422	-	66	58.639	ENSMFAG00000044645	APOBEC2	98	55.251	Macaca_fascicularis
ENSLBEG00000009422	-	66	58.639	ENSMMUG00000021171	APOBEC2	98	55.251	Macaca_mulatta
ENSLBEG00000009422	-	66	58.639	ENSMNEG00000045497	APOBEC2	98	55.251	Macaca_nemestrina
ENSLBEG00000009422	-	66	58.639	ENSMLEG00000028328	APOBEC2	98	55.251	Mandrillus_leucophaeus
ENSLBEG00000009422	-	100	73.310	ENSMAMG00000007926	APOBEC2	100	72.143	Mastacembelus_armatus
ENSLBEG00000009422	-	82	53.648	ENSMAMG00000023685	apobec2a	90	53.680	Mastacembelus_armatus
ENSLBEG00000009422	-	100	75.445	ENSMZEG00005027159	APOBEC2	100	73.571	Maylandia_zebra
ENSLBEG00000009422	-	79	56.637	ENSMZEG00005005240	-	95	56.637	Maylandia_zebra
ENSLBEG00000009422	-	65	58.201	ENSMGAG00000010173	APOBEC2	94	56.425	Meleagris_gallopavo
ENSLBEG00000009422	-	66	58.115	ENSMAUG00000011016	Apobec2	98	52.968	Mesocricetus_auratus
ENSLBEG00000009422	-	73	55.251	ENSMICG00000043339	APOBEC2	98	55.251	Microcebus_murinus
ENSLBEG00000009422	-	66	58.115	ENSMOCG00000001904	Apobec2	98	52.968	Microtus_ochrogaster
ENSLBEG00000009422	-	100	73.929	ENSMMOG00000008681	apobec2b	85	79.018	Mola_mola
ENSLBEG00000009422	-	73	52.315	ENSMODG00000013090	APOBEC2	98	52.315	Monodelphis_domestica
ENSLBEG00000009422	-	100	71.071	ENSMALG00000013779	APOBEC2	100	68.929	Monopterus_albus
ENSLBEG00000009422	-	85	50.413	ENSMALG00000020523	apobec2a	93	51.948	Monopterus_albus
ENSLBEG00000009422	-	66	57.592	MGP_CAROLIEiJ_G0021727	Apobec2	98	52.511	Mus_caroli
ENSLBEG00000009422	-	66	57.592	ENSMUSG00000040694	Apobec2	98	52.511	Mus_musculus
ENSLBEG00000009422	-	66	57.592	MGP_PahariEiJ_G0020716	Apobec2	98	52.511	Mus_pahari
ENSLBEG00000009422	-	66	59.162	ENSMPUG00000013691	APOBEC2	97	53.982	Mustela_putorius_furo
ENSLBEG00000009422	-	66	57.592	ENSMLUG00000011327	APOBEC2	98	51.327	Myotis_lucifugus
ENSLBEG00000009422	-	66	57.068	ENSNGAG00000013717	Apobec2	98	52.055	Nannospalax_galili
ENSLBEG00000009422	-	100	72.500	ENSNBRG00000018806	apobec2b	89	72.500	Neolamprologus_brichardi
ENSLBEG00000009422	-	86	52.459	ENSNBRG00000021776	apobec2a	90	56.250	Neolamprologus_brichardi
ENSLBEG00000009422	-	66	58.639	ENSNLEG00000005057	APOBEC2	98	55.708	Nomascus_leucogenys
ENSLBEG00000009422	-	73	53.241	ENSMEUG00000011623	APOBEC2	98	53.241	Notamacropus_eugenii
ENSLBEG00000009422	-	66	58.639	ENSOPRG00000014808	APOBEC2	98	53.363	Ochotona_princeps
ENSLBEG00000009422	-	66	58.115	ENSODEG00000016183	APOBEC2	98	54.018	Octodon_degus
ENSLBEG00000009422	-	100	73.929	ENSONIG00000012289	apobec2b	100	73.929	Oreochromis_niloticus
ENSLBEG00000009422	-	86	55.823	ENSONIG00000004644	-	90	57.456	Oreochromis_niloticus
ENSLBEG00000009422	-	58	55.952	ENSOANG00000000824	APOBEC2	99	54.144	Ornithorhynchus_anatinus
ENSLBEG00000009422	-	66	58.639	ENSOCUG00000028008	APOBEC2	98	53.363	Oryctolagus_cuniculus
ENSLBEG00000009422	-	100	72.085	ENSORLG00000022372	APOBEC2	79	81.043	Oryzias_latipes
ENSLBEG00000009422	-	79	56.195	ENSORLG00000010752	apobec2a	94	56.195	Oryzias_latipes
ENSLBEG00000009422	-	100	72.438	ENSORLG00020006164	APOBEC2	79	81.517	Oryzias_latipes_hni
ENSLBEG00000009422	-	79	56.195	ENSORLG00020004153	apobec2a	94	56.195	Oryzias_latipes_hni
ENSLBEG00000009422	-	79	56.195	ENSORLG00015021781	apobec2a	94	56.195	Oryzias_latipes_hsok
ENSLBEG00000009422	-	100	70.979	ENSORLG00015022089	-	79	81.517	Oryzias_latipes_hsok
ENSLBEG00000009422	-	100	71.786	ENSOMEG00000015449	APOBEC2	100	71.429	Oryzias_melastigma
ENSLBEG00000009422	-	79	55.752	ENSOMEG00000001311	apobec2a	94	55.752	Oryzias_melastigma
ENSLBEG00000009422	-	73	54.795	ENSOGAG00000002632	APOBEC2	98	54.795	Otolemur_garnettii
ENSLBEG00000009422	-	66	58.115	ENSOARG00000000820	APOBEC2	98	53.425	Ovis_aries
ENSLBEG00000009422	-	66	58.639	ENSPPAG00000035598	APOBEC2	98	54.667	Pan_paniscus
ENSLBEG00000009422	-	66	58.115	ENSPPRG00000008530	APOBEC2	98	53.881	Panthera_pardus
ENSLBEG00000009422	-	66	58.115	ENSPTIG00000011084	APOBEC2	98	53.182	Panthera_tigris_altaica
ENSLBEG00000009422	-	66	58.639	ENSPTRG00000029679	APOBEC2	98	54.667	Pan_troglodytes
ENSLBEG00000009422	-	66	58.639	ENSPANG00000007121	APOBEC2	98	55.251	Papio_anubis
ENSLBEG00000009422	-	91	53.696	ENSPKIG00000005395	apobec2a	87	57.778	Paramormyrops_kingsleyae
ENSLBEG00000009422	-	85	59.833	ENSPKIG00000004741	apobec2b	82	60.619	Paramormyrops_kingsleyae
ENSLBEG00000009422	-	64	59.459	ENSPSIG00000013480	APOBEC2	96	54.545	Pelodiscus_sinensis
ENSLBEG00000009422	-	100	70.357	ENSPMGG00000002686	APOBEC2	67	76.577	Periophthalmus_magnuspinnatus
ENSLBEG00000009422	-	76	57.604	ENSPMGG00000004044	apobec2a	87	57.604	Periophthalmus_magnuspinnatus
ENSLBEG00000009422	-	66	58.115	ENSPEMG00000005724	Apobec2	98	52.968	Peromyscus_maniculatus_bairdii
ENSLBEG00000009422	-	100	70.714	ENSPFOG00000001216	apobec2b	100	72.143	Poecilia_formosa
ENSLBEG00000009422	-	100	70.000	ENSPLAG00000002074	apobec2b	100	71.429	Poecilia_latipinna
ENSLBEG00000009422	-	100	71.429	ENSPMEG00000017537	apobec2b	100	72.143	Poecilia_mexicana
ENSLBEG00000009422	-	100	71.429	ENSPREG00000020060	apobec2b	87	72.500	Poecilia_reticulata
ENSLBEG00000009422	-	66	58.115	ENSPPYG00000016586	APOBEC2	98	55.251	Pongo_abelii
ENSLBEG00000009422	-	66	59.686	ENSPCAG00000011433	APOBEC2	100	59.686	Procavia_capensis
ENSLBEG00000009422	-	66	59.162	ENSPCOG00000026935	APOBEC2	98	55.251	Propithecus_coquereli
ENSLBEG00000009422	-	66	58.639	ENSPVAG00000008316	APOBEC2	98	53.425	Pteropus_vampyrus
ENSLBEG00000009422	-	100	73.214	ENSPNYG00000016747	apobec2b	100	73.214	Pundamilia_nyererei
ENSLBEG00000009422	-	98	50.903	ENSPNAG00000010382	apobec2a	89	55.932	Pygocentrus_nattereri
ENSLBEG00000009422	-	79	57.080	ENSPNAG00000013666	apobec2b	79	57.399	Pygocentrus_nattereri
ENSLBEG00000009422	-	66	57.592	ENSRNOG00000012303	Apobec2	98	52.511	Rattus_norvegicus
ENSLBEG00000009422	-	66	58.639	ENSRBIG00000044756	APOBEC2	98	52.968	Rhinopithecus_bieti
ENSLBEG00000009422	-	66	58.639	ENSRROG00000030082	APOBEC2	98	52.968	Rhinopithecus_roxellana
ENSLBEG00000009422	-	66	58.115	ENSSBOG00000028496	APOBEC2	98	54.795	Saimiri_boliviensis_boliviensis
ENSLBEG00000009422	-	65	57.895	ENSSHAG00000017771	APOBEC2	97	53.953	Sarcophilus_harrisii
ENSLBEG00000009422	-	60	55.030	ENSSFOG00015005437	-	73	53.757	Scleropages_formosus
ENSLBEG00000009422	-	75	65.877	ENSSFOG00015022920	apobec2	77	65.877	Scleropages_formosus
ENSLBEG00000009422	-	69	85.052	ENSSMAG00000005110	APOBEC2	100	74.286	Scophthalmus_maximus
ENSLBEG00000009422	-	79	56.444	ENSSMAG00000001011	apobec2a	66	56.444	Scophthalmus_maximus
ENSLBEG00000009422	-	100	78.292	ENSSDUG00000014543	apobec2b	100	75.357	Seriola_dumerili
ENSLBEG00000009422	-	74	57.346	ENSSDUG00000007013	apobec2a	87	56.000	Seriola_dumerili
ENSLBEG00000009422	-	92	51.724	ENSSLDG00000020199	apobec2a	88	55.947	Seriola_lalandi_dorsalis
ENSLBEG00000009422	-	100	78.292	ENSSLDG00000003321	apobec2b	100	75.357	Seriola_lalandi_dorsalis
ENSLBEG00000009422	-	61	53.333	ENSSPUG00000010839	APOBEC2	87	53.333	Sphenodon_punctatus
ENSLBEG00000009422	-	100	78.648	ENSSPAG00000005253	apobec2b	100	74.468	Stegastes_partitus
ENSLBEG00000009422	-	87	52.823	ENSSPAG00000016299	-	88	55.556	Stegastes_partitus
ENSLBEG00000009422	-	66	58.639	ENSSSCG00000036018	APOBEC2	98	53.881	Sus_scrofa
ENSLBEG00000009422	-	65	57.979	ENSTGUG00000018533	APOBEC2	98	52.212	Taeniopygia_guttata
ENSLBEG00000009422	-	70	57.921	ENSTRUG00000009123	apobec2a	91	53.304	Takifugu_rubripes
ENSLBEG00000009422	-	100	70.357	ENSTRUG00000012839	apobec2b	84	76.018	Takifugu_rubripes
ENSLBEG00000009422	-	100	72.085	ENSTNIG00000015038	apobec2b	78	80.488	Tetraodon_nigroviridis
ENSLBEG00000009422	-	66	58.639	ENSTBEG00000003553	APOBEC2	98	53.425	Tupaia_belangeri
ENSLBEG00000009422	-	79	50.870	ENSTTRG00000013392	APOBEC2	99	50.870	Tursiops_truncatus
ENSLBEG00000009422	-	66	59.162	ENSUAMG00000027667	APOBEC2	97	54.751	Ursus_americanus
ENSLBEG00000009422	-	66	58.115	ENSVVUG00000026617	APOBEC2	98	52.511	Vulpes_vulpes
ENSLBEG00000009422	-	65	52.261	ENSXETG00000008007	apobec2	84	52.261	Xenopus_tropicalis
ENSLBEG00000009422	-	100	71.378	ENSXCOG00000007398	apobec2b	100	70.000	Xiphophorus_couchianus
ENSLBEG00000009422	-	100	72.085	ENSXMAG00000008134	apobec2b	100	70.714	Xiphophorus_maculatus