EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000009990 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 8489 bases
Position: chrFKLU01000187.1:475058-483546
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000013137	S1	PF00575.23	1.5e-38	1	3
ENSLBEP00000013137	S1	PF00575.23	1.5e-38	2	3
ENSLBEP00000013137	S1	PF00575.23	1.5e-38	3	3
ENSLBEP00000013110	S1	PF00575.23	4.4e-25	1	3
ENSLBEP00000013110	S1	PF00575.23	4.4e-25	2	3
ENSLBEP00000013110	S1	PF00575.23	4.4e-25	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000013831	-	2520	-	ENSLBEP00000013137	839 (aa)	-	-
ENSLBET00000013803	-	2532	-	ENSLBEP00000013110	843 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000009990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000009990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000009990	-	94	67.266	ENSACIG00000006458	-	92	67.386	Amphilophus_citrinellus
ENSLBEG00000009990	-	100	72.881	ENSAPEG00000020240	pdcd11	87	72.881	Amphiprion_percula
ENSLBEG00000009990	-	94	73.162	ENSACLG00000018236	pdcd11	53	73.162	Astatotilapia_calliptera
ENSLBEG00000009990	-	98	49.366	ENSAMXG00000005458	pdcd11	96	49.941	Astyanax_mexicanus
ENSLBEG00000009990	-	99	41.714	ENSCPBG00000024487	PDCD11	51	41.829	Chrysemys_picta_bellii
ENSLBEG00000009990	-	99	69.388	ENSCSEG00000010739	pdcd11	50	69.048	Cynoglossus_semilaevis
ENSLBEG00000009990	-	98	50.691	ENSDARG00000052480	pdcd11	65	50.514	Danio_rerio
ENSLBEG00000009990	-	98	56.208	ENSFHEG00000022997	pdcd11	50	56.332	Fundulus_heteroclitus
ENSLBEG00000009990	-	99	41.321	ENSGALG00000008265	PDCD11	59	41.939	Gallus_gallus
ENSLBEG00000009990	-	99	53.794	ENSIPUG00000015102	pdcd11	94	53.515	Ictalurus_punctatus
ENSLBEG00000009990	-	96	68.978	ENSKMAG00000021182	pdcd11	93	68.978	Kryptolebias_marmoratus
ENSLBEG00000009990	-	94	71.583	ENSMMOG00000007572	pdcd11	92	71.583	Mola_mola
ENSLBEG00000009990	-	94	74.731	ENSMALG00000003859	pdcd11	93	74.731	Monopterus_albus
ENSLBEG00000009990	-	99	62.601	ENSNBRG00000021596	pdcd11	99	67.089	Neolamprologus_brichardi
ENSLBEG00000009990	-	90	69.925	ENSORLG00000012995	pdcd11	89	70.050	Oryzias_latipes
ENSLBEG00000009990	-	67	68.842	ENSOMEG00000010947	-	94	68.842	Oryzias_melastigma
ENSLBEG00000009990	-	95	44.900	ENSPSIG00000005102	PDCD11	58	44.018	Pelodiscus_sinensis
ENSLBEG00000009990	-	92	60.912	ENSPMGG00000007289	pdcd11	63	60.912	Periophthalmus_magnuspinnatus
ENSLBEG00000009990	-	97	65.851	ENSPLAG00000014494	pdcd11	92	66.865	Poecilia_latipinna
ENSLBEG00000009990	-	94	67.186	ENSPMEG00000018177	pdcd11	93	67.186	Poecilia_mexicana
ENSLBEG00000009990	-	93	74.576	ENSSDUG00000021302	pdcd11	94	74.576	Seriola_dumerili
ENSLBEG00000009990	-	99	74.658	ENSSLDG00000010228	pdcd11	96	74.658	Seriola_lalandi_dorsalis
ENSLBEG00000009990	-	100	72.542	ENSSPAG00000017558	pdcd11	50	72.542	Stegastes_partitus
ENSLBEG00000009990	-	100	69.048	ENSTRUG00000014291	pdcd11	70	69.048	Takifugu_rubripes