EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000010010 (Gene tree)
Gene ID: 109984884
Gene Symbol: hnrnpa1a
Alias: zgc:66127
Full Name: heterogeneous nuclear ribonucleoprotein A1-like 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3500 bases
Position: chrFKLU01000076.1:1038938-1042437
Accession: 109984884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000013016	RRM_1	PF00076.22	5.5e-37	1	2
ENSLBEP00000013016	RRM_1	PF00076.22	5.5e-37	2	2
ENSLBEP00000012998	RRM_1	PF00076.22	6e-37	1	2
ENSLBEP00000012998	RRM_1	PF00076.22	6e-37	2	2
ENSLBEP00000013048	RRM_1	PF00076.22	6e-37	1	2
ENSLBEP00000013048	RRM_1	PF00076.22	6e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000013683	-	1144	-	ENSLBEP00000012998	358 (aa)	-	-
ENSLBET00000013733	-	1812	-	ENSLBEP00000013048	358 (aa)	-	-
ENSLBET00000013701	-	1782	XM_020635044	ENSLBEP00000013016	348 (aa)	XP_020490700	UPI0009B489B5

Gene Model

Click here to download ENSLBEG00000010010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010010's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000010010	hnrnpa1a	54	41.341	ENSLBEG00000001375	-	52	40.000
ENSLBEG00000010010	hnrnpa1a	53	39.459	ENSLBEG00000004479	-	64	38.356
ENSLBEG00000010010	hnrnpa1a	66	34.956	ENSLBEG00000006595	hnrnpaba	58	35.000
ENSLBEG00000010010	hnrnpa1a	55	56.250	ENSLBEG00000006362	-	79	55.556
ENSLBEG00000010010	hnrnpa1a	57	34.000	ENSLBEG00000021801	tardbpl	60	35.000
ENSLBEG00000010010	hnrnpa1a	55	81.347	ENSLBEG00000016767	hnrnpa3	66	76.126
ENSLBEG00000010010	hnrnpa1a	53	40.909	ENSLBEG00000007061	msi2a	75	45.690
ENSLBEG00000010010	hnrnpa1a	53	40.761	ENSLBEG00000008789	MSI1	58	39.487
ENSLBEG00000010010	hnrnpa1a	71	34.677	ENSLBEG00000027508	hnrnpd	60	39.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000010010	hnrnpa1a	65	92.511	ENSAPOG00000019369	-	89	76.603	Acanthochromis_polyacanthus
ENSLBEG00000010010	hnrnpa1a	50	56.000	ENSACIG00000021815	-	87	55.056	Amphilophus_citrinellus
ENSLBEG00000010010	hnrnpa1a	91	81.587	ENSAOCG00000005289	-	67	91.630	Amphiprion_ocellaris
ENSLBEG00000010010	hnrnpa1a	91	81.587	ENSAPEG00000004179	-	67	91.630	Amphiprion_percula
ENSLBEG00000010010	hnrnpa1a	50	59.119	ENSATEG00000003423	-	75	59.119	Anabas_testudineus
ENSLBEG00000010010	hnrnpa1a	65	92.952	ENSATEG00000022918	hnrnpa1a	88	94.681	Anabas_testudineus
ENSLBEG00000010010	hnrnpa1a	91	77.532	ENSACLG00000006940	-	68	91.228	Astatotilapia_calliptera
ENSLBEG00000010010	hnrnpa1a	53	63.842	ENSAMXG00000037730	-	56	61.905	Astyanax_mexicanus
ENSLBEG00000010010	hnrnpa1a	52	85.165	ENSAMXG00000006296	hnrnpa1a	88	65.046	Astyanax_mexicanus
ENSLBEG00000010010	hnrnpa1a	53	53.889	ENSCSEG00000014051	-	74	53.591	Cynoglossus_semilaevis
ENSLBEG00000010010	hnrnpa1a	65	87.773	ENSCSEG00000007589	hnrnpa1a	70	87.336	Cynoglossus_semilaevis
ENSLBEG00000010010	hnrnpa1a	66	90.351	ENSCVAG00000012637	hnrnpa1a	66	90.708	Cyprinodon_variegatus
ENSLBEG00000010010	hnrnpa1a	55	81.250	ENSDARG00000011020	hnrnpa1a	64	71.600	Danio_rerio
ENSLBEG00000010010	hnrnpa1a	55	90.000	ENSELUG00000007372	-	52	89.730	Esox_lucius
ENSLBEG00000010010	hnrnpa1a	53	61.453	ENSGMOG00000020353	-	94	61.453	Gadus_morhua
ENSLBEG00000010010	hnrnpa1a	53	86.413	ENSGMOG00000017950	hnrnpa1a	50	85.870	Gadus_morhua
ENSLBEG00000010010	hnrnpa1a	65	45.575	ENSGAFG00000016803	-	58	46.903	Gambusia_affinis
ENSLBEG00000010010	hnrnpa1a	66	92.105	ENSGAFG00000007751	-	66	91.593	Gambusia_affinis
ENSLBEG00000010010	hnrnpa1a	61	91.667	ENSGACG00000009435	-	60	90.164	Gasterosteus_aculeatus
ENSLBEG00000010010	hnrnpa1a	91	81.962	ENSHBUG00000005647	hnrnpa1a	67	92.377	Haplochromis_burtoni
ENSLBEG00000010010	hnrnpa1a	59	78.049	ENSIPUG00000022440	-	72	83.832	Ictalurus_punctatus
ENSLBEG00000010010	hnrnpa1a	57	82.323	ENSIPUG00000002023	hnrnpa1a	75	86.857	Ictalurus_punctatus
ENSLBEG00000010010	hnrnpa1a	53	61.798	ENSIPUG00000001991	-	77	61.798	Ictalurus_punctatus
ENSLBEG00000010010	hnrnpa1a	93	83.642	ENSKMAG00000020859	-	67	91.189	Kryptolebias_marmoratus
ENSLBEG00000010010	hnrnpa1a	53	71.351	ENSMFAG00000028351	-	65	66.667	Macaca_fascicularis
ENSLBEG00000010010	hnrnpa1a	65	92.070	ENSMAMG00000007606	-	66	91.189	Mastacembelus_armatus
ENSLBEG00000010010	hnrnpa1a	91	81.962	ENSMZEG00005027173	hnrnpa1a	68	91.228	Maylandia_zebra
ENSLBEG00000010010	hnrnpa1a	55	95.288	ENSMMOG00000008251	hnrnpa1a	89	84.956	Mola_mola
ENSLBEG00000010010	hnrnpa1a	51	56.497	ENSMALG00000008886	-	86	56.180	Monopterus_albus
ENSLBEG00000010010	hnrnpa1a	65	92.070	ENSMALG00000014091	hnrnpa1a	65	91.189	Monopterus_albus
ENSLBEG00000010010	hnrnpa1a	65	91.228	ENSNBRG00000018441	-	91	80.757	Neolamprologus_brichardi
ENSLBEG00000010010	hnrnpa1a	52	59.091	ENSNBRG00000014469	-	82	59.091	Neolamprologus_brichardi
ENSLBEG00000010010	hnrnpa1a	52	52.023	ENSORLG00000029240	-	89	52.023	Oryzias_latipes
ENSLBEG00000010010	hnrnpa1a	91	82.222	ENSORLG00000008001	-	68	91.593	Oryzias_latipes
ENSLBEG00000010010	hnrnpa1a	91	82.222	ENSORLG00020006582	hnrnpa1a	98	89.100	Oryzias_latipes_hni
ENSLBEG00000010010	hnrnpa1a	51	51.136	ENSORLG00020022498	-	80	51.724	Oryzias_latipes_hni
ENSLBEG00000010010	hnrnpa1a	52	49.721	ENSORLG00020006043	-	59	50.575	Oryzias_latipes_hni
ENSLBEG00000010010	hnrnpa1a	91	81.905	ENSORLG00015022294	-	68	91.150	Oryzias_latipes_hsok
ENSLBEG00000010010	hnrnpa1a	91	82.540	ENSOMEG00000015959	-	68	91.593	Oryzias_melastigma
ENSLBEG00000010010	hnrnpa1a	59	52.217	ENSPMGG00000016392	-	93	56.983	Periophthalmus_magnuspinnatus
ENSLBEG00000010010	hnrnpa1a	54	92.513	ENSPMGG00000011804	hnrnpa1a	82	80.349	Periophthalmus_magnuspinnatus
ENSLBEG00000010010	hnrnpa1a	66	92.105	ENSPFOG00000001825	-	66	91.593	Poecilia_formosa
ENSLBEG00000010010	hnrnpa1a	66	92.105	ENSPMEG00000002425	-	66	91.593	Poecilia_mexicana
ENSLBEG00000010010	hnrnpa1a	52	59.091	ENSPNYG00000020729	-	90	59.091	Pundamilia_nyererei
ENSLBEG00000010010	hnrnpa1a	53	84.324	ENSPNAG00000007752	hnrnpa1a	87	78.182	Pygocentrus_nattereri
ENSLBEG00000010010	hnrnpa1a	51	55.682	ENSSMAG00000010246	-	79	55.367	Scophthalmus_maximus
ENSLBEG00000010010	hnrnpa1a	51	59.036	ENSSMAG00000010279	-	93	59.036	Scophthalmus_maximus
ENSLBEG00000010010	hnrnpa1a	61	90.654	ENSSMAG00000004641	hnrnpa1a	91	75.758	Scophthalmus_maximus
ENSLBEG00000010010	hnrnpa1a	51	58.960	ENSSDUG00000002431	-	82	58.960	Seriola_dumerili
ENSLBEG00000010010	hnrnpa1a	89	81.435	ENSSDUG00000013908	hnrnpa1a	96	86.266	Seriola_dumerili
ENSLBEG00000010010	hnrnpa1a	89	97.283	ENSSLDG00000003718	hnrnpa1a	95	86.266	Seriola_lalandi_dorsalis
ENSLBEG00000010010	hnrnpa1a	90	82.484	ENSSPAG00000018518	-	68	90.265	Stegastes_partitus
ENSLBEG00000010010	hnrnpa1a	65	88.000	ENSTRUG00000020491	-	69	88.106	Takifugu_rubripes
ENSLBEG00000010010	hnrnpa1a	66	53.333	ENSTNIG00000007398	-	69	60.335	Tetraodon_nigroviridis
ENSLBEG00000010010	hnrnpa1a	67	83.333	ENSXCOG00000009001	-	87	86.758	Xiphophorus_couchianus
ENSLBEG00000010010	hnrnpa1a	66	92.105	ENSXMAG00000008076	-	65	91.593	Xiphophorus_maculatus