EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000010041 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 10148 bases
Position: chrFKLU01001260.1:8206-18353
Accession: 110003733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000013117	XRN_N	PF03159.18	6.3e-102	1	1
ENSLBEP00000013139	XRN_N	PF03159.18	6.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000013833	-	303	-	ENSLBEP00000013139	100 (aa)	-	-
ENSLBET00000013810	-	1512	XM_020659285	ENSLBEP00000013117	503 (aa)	XP_020514941	-

Gene Model

Click here to download ENSLBEG00000010041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000010041	xrn2	92	57.426	ENSLBEG00000018656	xrn1	95	57.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000010041	xrn2	100	79.492	ENSG00000088930	XRN2	54	79.492	Homo_sapiens
ENSLBEG00000010041	xrn2	100	89.942	ENSAPOG00000009818	xrn2	53	89.942	Acanthochromis_polyacanthus
ENSLBEG00000010041	xrn2	100	79.688	ENSAMEG00000012581	XRN2	54	79.688	Ailuropoda_melanoleuca
ENSLBEG00000010041	xrn2	100	85.907	ENSACIG00000015047	xrn2	94	85.880	Amphilophus_citrinellus
ENSLBEG00000010041	xrn2	100	90.716	ENSAOCG00000023632	xrn2	53	90.716	Amphiprion_ocellaris
ENSLBEG00000010041	xrn2	100	90.522	ENSAPEG00000014871	xrn2	53	90.522	Amphiprion_percula
ENSLBEG00000010041	xrn2	100	89.443	ENSATEG00000001273	xrn2	54	89.443	Anabas_testudineus
ENSLBEG00000010041	xrn2	95	81.520	ENSAPLG00000013869	XRN2	52	81.520	Anas_platyrhynchos
ENSLBEG00000010041	xrn2	100	79.029	ENSACAG00000005565	XRN2	53	79.029	Anolis_carolinensis
ENSLBEG00000010041	xrn2	100	79.492	ENSANAG00000020126	XRN2	55	79.492	Aotus_nancymaae
ENSLBEG00000010041	xrn2	99	91.919	ENSACLG00000010522	xrn2	100	91.919	Astatotilapia_calliptera
ENSLBEG00000010041	xrn2	100	86.398	ENSAMXG00000018301	xrn2	54	86.398	Astyanax_mexicanus
ENSLBEG00000010041	xrn2	100	79.492	ENSBTAG00000011304	XRN2	55	79.492	Bos_taurus
ENSLBEG00000010041	xrn2	100	79.492	ENSCJAG00000005611	XRN2	55	79.492	Callithrix_jacchus
ENSLBEG00000010041	xrn2	100	79.688	ENSCAFG00000005185	XRN2	54	79.688	Canis_familiaris
ENSLBEG00000010041	xrn2	100	79.688	ENSCAFG00020027479	XRN2	54	79.688	Canis_lupus_dingo
ENSLBEG00000010041	xrn2	100	78.906	ENSCHIG00000006921	XRN2	54	78.906	Capra_hircus
ENSLBEG00000010041	xrn2	100	80.039	ENSTSYG00000008315	XRN2	54	80.039	Carlito_syrichta
ENSLBEG00000010041	xrn2	100	79.883	ENSCPOG00000009407	XRN2	54	79.883	Cavia_porcellus
ENSLBEG00000010041	xrn2	100	79.492	ENSCATG00000040350	XRN2	54	79.492	Cercocebus_atys
ENSLBEG00000010041	xrn2	100	80.078	ENSCLAG00000013419	XRN2	54	80.078	Chinchilla_lanigera
ENSLBEG00000010041	xrn2	100	79.492	ENSCSAG00000011094	XRN2	54	79.492	Chlorocebus_sabaeus
ENSLBEG00000010041	xrn2	100	81.128	ENSCPBG00000023533	XRN2	53	81.518	Chrysemys_picta_bellii
ENSLBEG00000010041	xrn2	97	65.191	ENSCING00000022336	-	61	64.844	Ciona_intestinalis
ENSLBEG00000010041	xrn2	100	63.762	ENSCSAVG00000011217	-	97	63.762	Ciona_savignyi
ENSLBEG00000010041	xrn2	100	79.492	ENSCANG00000040240	XRN2	54	79.492	Colobus_angolensis_palliatus
ENSLBEG00000010041	xrn2	100	80.196	ENSCGRG00001010676	Xrn2	55	80.588	Cricetulus_griseus_chok1gshd
ENSLBEG00000010041	xrn2	95	79.752	ENSCGRG00000006378	Xrn2	52	80.165	Cricetulus_griseus_crigri
ENSLBEG00000010041	xrn2	100	83.399	ENSCSEG00000005628	xrn2	100	81.621	Cynoglossus_semilaevis
ENSLBEG00000010041	xrn2	100	88.676	ENSCVAG00000018999	xrn2	97	88.676	Cyprinodon_variegatus
ENSLBEG00000010041	xrn2	100	86.127	ENSDARG00000101900	xrn2	96	86.100	Danio_rerio
ENSLBEG00000010041	xrn2	100	79.688	ENSDNOG00000001895	XRN2	54	79.688	Dasypus_novemcinctus
ENSLBEG00000010041	xrn2	100	79.688	ENSDORG00000005434	Xrn2	55	79.688	Dipodomys_ordii
ENSLBEG00000010041	xrn2	92	71.429	FBgn0031868	Rat1	51	64.530	Drosophila_melanogaster
ENSLBEG00000010041	xrn2	100	70.196	ENSETEG00000001740	XRN2	54	69.608	Echinops_telfairi
ENSLBEG00000010041	xrn2	78	93.590	ENSEBUG00000016136	xrn2	64	70.998	Eptatretus_burgeri
ENSLBEG00000010041	xrn2	100	79.688	ENSEASG00005002484	XRN2	54	79.688	Equus_asinus_asinus
ENSLBEG00000010041	xrn2	100	79.688	ENSECAG00000018988	XRN2	55	77.170	Equus_caballus
ENSLBEG00000010041	xrn2	100	91.089	ENSELUG00000000552	xrn2	52	91.089	Esox_lucius
ENSLBEG00000010041	xrn2	100	79.688	ENSFCAG00000007970	XRN2	56	79.688	Felis_catus
ENSLBEG00000010041	xrn2	100	81.176	ENSFALG00000004508	XRN2	54	81.176	Ficedula_albicollis
ENSLBEG00000010041	xrn2	100	80.078	ENSFDAG00000016311	XRN2	54	80.078	Fukomys_damarensis
ENSLBEG00000010041	xrn2	98	84.000	ENSFHEG00000013039	xrn2	98	84.000	Fundulus_heteroclitus
ENSLBEG00000010041	xrn2	100	86.481	ENSGMOG00000013436	xrn2	61	86.481	Gadus_morhua
ENSLBEG00000010041	xrn2	100	81.409	ENSGALG00000008372	XRN2	54	81.409	Gallus_gallus
ENSLBEG00000010041	xrn2	100	88.676	ENSGAFG00000014284	xrn2	92	87.105	Gambusia_affinis
ENSLBEG00000010041	xrn2	100	88.201	ENSGACG00000011870	xrn2	96	88.008	Gasterosteus_aculeatus
ENSLBEG00000010041	xrn2	100	80.271	ENSGAGG00000004884	XRN2	53	80.739	Gopherus_agassizii
ENSLBEG00000010041	xrn2	100	79.492	ENSGGOG00000013738	XRN2	54	79.492	Gorilla_gorilla
ENSLBEG00000010041	xrn2	99	91.919	ENSHBUG00000005077	xrn2	100	91.919	Haplochromis_burtoni
ENSLBEG00000010041	xrn2	100	78.125	ENSHGLG00000014831	XRN2	53	78.125	Heterocephalus_glaber_female
ENSLBEG00000010041	xrn2	100	78.125	ENSHGLG00100013130	XRN2	53	78.125	Heterocephalus_glaber_male
ENSLBEG00000010041	xrn2	100	86.100	ENSHCOG00000011994	xrn2	53	86.293	Hippocampus_comes
ENSLBEG00000010041	xrn2	100	86.590	ENSIPUG00000006639	xrn2	54	86.590	Ictalurus_punctatus
ENSLBEG00000010041	xrn2	100	79.688	ENSSTOG00000000589	XRN2	54	79.688	Ictidomys_tridecemlineatus
ENSLBEG00000010041	xrn2	100	80.078	ENSJJAG00000022128	Xrn2	54	80.078	Jaculus_jaculus
ENSLBEG00000010041	xrn2	80	81.250	ENSKMAG00000002078	-	96	85.849	Kryptolebias_marmoratus
ENSLBEG00000010041	xrn2	97	78.600	ENSLACG00000008307	XRN2	61	78.600	Latimeria_chalumnae
ENSLBEG00000010041	xrn2	99	85.686	ENSLOCG00000016874	xrn2	54	85.686	Lepisosteus_oculatus
ENSLBEG00000010041	xrn2	100	79.883	ENSLAFG00000014624	XRN2	54	79.883	Loxodonta_africana
ENSLBEG00000010041	xrn2	100	79.492	ENSMFAG00000038122	XRN2	54	79.492	Macaca_fascicularis
ENSLBEG00000010041	xrn2	100	79.492	ENSMMUG00000011405	XRN2	54	79.492	Macaca_mulatta
ENSLBEG00000010041	xrn2	100	79.492	ENSMNEG00000040626	XRN2	54	79.492	Macaca_nemestrina
ENSLBEG00000010041	xrn2	100	79.297	ENSMLEG00000041897	XRN2	54	79.297	Mandrillus_leucophaeus
ENSLBEG00000010041	xrn2	100	91.107	ENSMAMG00000008633	xrn2	53	91.107	Mastacembelus_armatus
ENSLBEG00000010041	xrn2	100	88.610	ENSMZEG00005022362	xrn2	94	85.300	Maylandia_zebra
ENSLBEG00000010041	xrn2	100	80.388	ENSMGAG00000003196	XRN2	54	80.388	Meleagris_gallopavo
ENSLBEG00000010041	xrn2	100	80.196	ENSMAUG00000021842	Xrn2	54	80.196	Mesocricetus_auratus
ENSLBEG00000010041	xrn2	100	80.078	ENSMICG00000008126	XRN2	54	80.078	Microcebus_murinus
ENSLBEG00000010041	xrn2	100	79.492	ENSMOCG00000012588	Xrn2	54	79.688	Microtus_ochrogaster
ENSLBEG00000010041	xrn2	100	88.676	ENSMMOG00000017576	xrn2	95	84.645	Mola_mola
ENSLBEG00000010041	xrn2	100	80.664	ENSMODG00000006163	XRN2	54	80.664	Monodelphis_domestica
ENSLBEG00000010041	xrn2	100	87.908	ENSMALG00000011355	xrn2	95	87.908	Monopterus_albus
ENSLBEG00000010041	xrn2	100	80.273	MGP_CAROLIEiJ_G0024400	Xrn2	54	80.273	Mus_caroli
ENSLBEG00000010041	xrn2	100	80.273	ENSMUSG00000027433	Xrn2	54	80.273	Mus_musculus
ENSLBEG00000010041	xrn2	100	80.273	MGP_PahariEiJ_G0025843	Xrn2	54	80.273	Mus_pahari
ENSLBEG00000010041	xrn2	100	80.273	MGP_SPRETEiJ_G0025318	Xrn2	54	80.273	Mus_spretus
ENSLBEG00000010041	xrn2	100	79.452	ENSMLUG00000001536	XRN2	54	79.452	Myotis_lucifugus
ENSLBEG00000010041	xrn2	100	80.078	ENSNGAG00000018138	Xrn2	54	80.078	Nannospalax_galili
ENSLBEG00000010041	xrn2	99	91.919	ENSNBRG00000008062	xrn2	100	91.919	Neolamprologus_brichardi
ENSLBEG00000010041	xrn2	100	79.492	ENSNLEG00000009991	XRN2	54	79.492	Nomascus_leucogenys
ENSLBEG00000010041	xrn2	100	79.883	ENSODEG00000010745	-	54	79.883	Octodon_degus
ENSLBEG00000010041	xrn2	97	72.946	ENSODEG00000000860	-	54	72.545	Octodon_degus
ENSLBEG00000010041	xrn2	100	88.911	ENSONIG00000018720	xrn2	53	88.911	Oreochromis_niloticus
ENSLBEG00000010041	xrn2	100	80.078	ENSOANG00000015673	XRN2	54	80.078	Ornithorhynchus_anatinus
ENSLBEG00000010041	xrn2	100	79.883	ENSOCUG00000013468	XRN2	54	79.883	Oryctolagus_cuniculus
ENSLBEG00000010041	xrn2	100	86.948	ENSORLG00000017213	xrn2	58	86.948	Oryzias_latipes
ENSLBEG00000010041	xrn2	100	86.948	ENSORLG00020001824	xrn2	54	86.948	Oryzias_latipes_hni
ENSLBEG00000010041	xrn2	100	86.948	ENSORLG00015019747	xrn2	54	86.948	Oryzias_latipes_hsok
ENSLBEG00000010041	xrn2	100	85.797	ENSOMEG00000019820	xrn2	53	86.372	Oryzias_melastigma
ENSLBEG00000010041	xrn2	100	80.117	ENSOGAG00000001068	XRN2	54	80.117	Otolemur_garnettii
ENSLBEG00000010041	xrn2	95	78.395	ENSOARG00000004443	XRN2	52	78.395	Ovis_aries
ENSLBEG00000010041	xrn2	100	79.492	ENSPPAG00000033549	XRN2	54	79.492	Pan_paniscus
ENSLBEG00000010041	xrn2	100	79.688	ENSPPRG00000008732	XRN2	54	79.688	Panthera_pardus
ENSLBEG00000010041	xrn2	95	79.218	ENSPTIG00000015683	XRN2	51	79.218	Panthera_tigris_altaica
ENSLBEG00000010041	xrn2	100	79.492	ENSPTRG00000013308	XRN2	54	79.492	Pan_troglodytes
ENSLBEG00000010041	xrn2	100	79.492	ENSPANG00000018088	XRN2	54	79.492	Papio_anubis
ENSLBEG00000010041	xrn2	100	85.413	ENSPKIG00000016889	xrn2	54	85.413	Paramormyrops_kingsleyae
ENSLBEG00000010041	xrn2	89	81.087	ENSPSIG00000014666	XRN2	60	81.087	Pelodiscus_sinensis
ENSLBEG00000010041	xrn2	100	79.883	ENSPEMG00000000111	Xrn2	54	79.883	Peromyscus_maniculatus_bairdii
ENSLBEG00000010041	xrn2	65	73.952	ENSPMAG00000002576	xrn2	98	73.952	Petromyzon_marinus
ENSLBEG00000010041	xrn2	99	90.392	ENSPFOG00000004182	xrn2	53	90.392	Poecilia_formosa
ENSLBEG00000010041	xrn2	100	88.868	ENSPLAG00000007351	xrn2	58	88.868	Poecilia_latipinna
ENSLBEG00000010041	xrn2	89	87.580	ENSPMEG00000011798	xrn2	51	87.580	Poecilia_mexicana
ENSLBEG00000010041	xrn2	100	89.251	ENSPREG00000012452	xrn2	58	89.251	Poecilia_reticulata
ENSLBEG00000010041	xrn2	100	79.492	ENSPPYG00000010755	XRN2	54	79.492	Pongo_abelii
ENSLBEG00000010041	xrn2	100	79.688	ENSPCAG00000011191	XRN2	53	79.688	Procavia_capensis
ENSLBEG00000010041	xrn2	100	70.703	ENSPCOG00000016468	XRN2	52	70.703	Propithecus_coquereli
ENSLBEG00000010041	xrn2	92	75.424	ENSPVAG00000004596	XRN2	54	64.844	Pteropus_vampyrus
ENSLBEG00000010041	xrn2	100	85.328	ENSPNYG00000001765	xrn2	94	82.012	Pundamilia_nyererei
ENSLBEG00000010041	xrn2	100	85.057	ENSPNAG00000010956	xrn2	54	85.057	Pygocentrus_nattereri
ENSLBEG00000010041	xrn2	100	79.883	ENSRNOG00000011785	Xrn2	54	80.273	Rattus_norvegicus
ENSLBEG00000010041	xrn2	100	79.492	ENSRBIG00000036193	XRN2	62	79.492	Rhinopithecus_bieti
ENSLBEG00000010041	xrn2	100	79.492	ENSSBOG00000021014	XRN2	54	79.492	Saimiri_boliviensis_boliviensis
ENSLBEG00000010041	xrn2	100	87.078	ENSSFOG00015001091	xrn2	57	87.078	Scleropages_formosus
ENSLBEG00000010041	xrn2	100	90.734	ENSSMAG00000007834	xrn2	53	90.734	Scophthalmus_maximus
ENSLBEG00000010041	xrn2	100	88.123	ENSSDUG00000012802	xrn2	60	88.506	Seriola_dumerili
ENSLBEG00000010041	xrn2	100	93.676	ENSSLDG00000021273	xrn2	58	93.676	Seriola_lalandi_dorsalis
ENSLBEG00000010041	xrn2	100	81.712	ENSSPUG00000005485	XRN2	54	81.712	Sphenodon_punctatus
ENSLBEG00000010041	xrn2	100	90.716	ENSSPAG00000016027	xrn2	53	90.716	Stegastes_partitus
ENSLBEG00000010041	xrn2	100	79.492	ENSSSCG00000007109	XRN2	55	79.492	Sus_scrofa
ENSLBEG00000010041	xrn2	100	78.988	ENSTGUG00000007535	XRN2	54	78.988	Taeniopygia_guttata
ENSLBEG00000010041	xrn2	100	89.921	ENSTRUG00000015489	xrn2	52	89.921	Takifugu_rubripes
ENSLBEG00000010041	xrn2	100	89.370	ENSTNIG00000010712	xrn2	53	89.370	Tetraodon_nigroviridis
ENSLBEG00000010041	xrn2	100	79.102	ENSTBEG00000004119	XRN2	54	79.297	Tupaia_belangeri
ENSLBEG00000010041	xrn2	100	78.711	ENSTTRG00000009087	XRN2	54	78.711	Tursiops_truncatus
ENSLBEG00000010041	xrn2	100	79.688	ENSUAMG00000024634	XRN2	50	86.131	Ursus_americanus
ENSLBEG00000010041	xrn2	95	79.218	ENSUMAG00000004012	XRN2	50	79.218	Ursus_maritimus
ENSLBEG00000010041	xrn2	100	79.688	ENSVVUG00000012178	XRN2	54	79.688	Vulpes_vulpes
ENSLBEG00000010041	xrn2	100	83.762	ENSXETG00000023501	xrn2	54	83.762	Xenopus_tropicalis
ENSLBEG00000010041	xrn2	100	88.484	ENSXMAG00000000242	xrn2	92	87.591	Xiphophorus_maculatus