EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000010084 (Gene tree)
Gene ID
109980928
Gene Symbol
pabpc1l
Alias
fi20g03|wu:fi20g03|zgc:55855
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
11038 bases
Position
chrFKLU01000027.1:1296874-1307911
Accession
109980928
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000013243PABPPF00658.181.2e-2911
ENSLBEP00000013194PABPPF00658.181.3e-2911
ENSLBEP00000013166PABPPF00658.181.4e-2911
ENSLBEP00000013243RRM_5PF13893.61.9e-0712
ENSLBEP00000013243RRM_5PF13893.61.9e-0722
ENSLBEP00000013194RRM_5PF13893.63.5e-0712
ENSLBEP00000013194RRM_5PF13893.63.5e-0722
ENSLBEP00000013166RRM_5PF13893.65.7e-0711
ENSLBEP00000013166RRM_1PF00076.224.1e-8914
ENSLBEP00000013166RRM_1PF00076.224.1e-8924
ENSLBEP00000013166RRM_1PF00076.224.1e-8934
ENSLBEP00000013166RRM_1PF00076.224.1e-8944
ENSLBEP00000013243RRM_1PF00076.225.6e-8914
ENSLBEP00000013243RRM_1PF00076.225.6e-8924
ENSLBEP00000013243RRM_1PF00076.225.6e-8934
ENSLBEP00000013243RRM_1PF00076.225.6e-8944
ENSLBEP00000013194RRM_1PF00076.227e-8914
ENSLBEP00000013194RRM_1PF00076.227e-8924
ENSLBEP00000013194RRM_1PF00076.227e-8934
ENSLBEP00000013194RRM_1PF00076.227e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000013894-2644XM_020629502ENSLBEP00000013194626 (aa)XP_020485158UPI0009B48BEF
ENSLBET00000013860-2890XM_020629501ENSLBEP00000013166655 (aa)XP_020485157UPI0009B46BCE
ENSLBET00000013944-1800-ENSLBEP00000013243599 (aa)--
Gene Model
Click here to download ENSLBEG00000010084's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010084's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000010084pabpc1l6030.645ENSLBEG00000028513-8831.868
ENSLBEG00000010084pabpc1l5036.047ENSLBEG00000016733celf5a5435.714
ENSLBEG00000010084pabpc1l9965.971ENSLBEG00000013654pabpc49766.190
ENSLBEG00000010084pabpc1l6434.146ENSLBEG00000008073elavl38335.294
ENSLBEG00000010084pabpc1l9967.520ENSLBEG00000024002-9867.520
ENSLBEG00000010084pabpc1l7334.247ENSLBEG00000026140celf3b6934.247
ENSLBEG00000010084pabpc1l6444.578ENSLBEG00000009909rbm39b6944.578
ENSLBEG00000010084pabpc1l9967.846ENSLBEG00000026845pabpc1b9868.000
ENSLBEG00000010084pabpc1l5136.047ENSLBEG00000011338si:dkey-205h23.26034.737
ENSLBEG00000010084pabpc1l6436.842ENSLBEG00000010843rbms2b7236.842
ENSLBEG00000010084pabpc1l5831.897ENSLBEG00000015023elavl49933.333
ENSLBEG00000010084pabpc1l5336.047ENSLBEG00000018296celf18136.047
ENSLBEG00000010084pabpc1l5934.146ENSLBEG00000012865tial18334.146
ENSLBEG00000010084pabpc1l6336.842ENSLBEG00000017716rbms2a5536.842
ENSLBEG00000010084pabpc1l6040.789ENSLBEG00000012897rbm195740.789
ENSLBEG00000010084pabpc1l5134.247ENSLBEG00000026936celf3a6234.247
ENSLBEG00000010084pabpc1l6246.667ENSLBEG00000008018-5146.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000010084pabpc1l9966.719ENSG00000101104PABPC1L9976.235Homo_sapiens
ENSLBEG00000010084pabpc1l9982.637ENSAPOG00000010842pabpc1l9982.637Acanthochromis_polyacanthus
ENSLBEG00000010084pabpc1l9963.422ENSAMEG00000004099PABPC1L10063.636Ailuropoda_melanoleuca
ENSLBEG00000010084pabpc1l9990.261ENSACIG00000021004-10090.261Amphilophus_citrinellus
ENSLBEG00000010084pabpc1l10084.505ENSAOCG00000006167-10084.505Amphiprion_ocellaris
ENSLBEG00000010084pabpc1l10082.748ENSAPEG00000010558-9988.073Amphiprion_percula
ENSLBEG00000010084pabpc1l10088.076ENSATEG00000007428pabpc1l10088.553Anabas_testudineus
ENSLBEG00000010084pabpc1l9870.128ENSAPLG00000008415PABPC1L9970.223Anas_platyrhynchos
ENSLBEG00000010084pabpc1l9972.684ENSACAG00000011841PABPC1L9972.684Anolis_carolinensis
ENSLBEG00000010084pabpc1l9967.195ENSANAG00000026826PABPC1L9966.505Aotus_nancymaae
ENSLBEG00000010084pabpc1l10089.617ENSACLG00000024791pabpc1l10089.617Astatotilapia_calliptera
ENSLBEG00000010084pabpc1l10079.173ENSAMXG00000013552pabpc1l10079.173Astyanax_mexicanus
ENSLBEG00000010084pabpc1l6486.905ENSBTAG00000055300-10086.905Bos_taurus
ENSLBEG00000010084pabpc1l7057.667ENSBTAG00000016849PABPC1L9257.667Bos_taurus
ENSLBEG00000010084pabpc1l9967.353ENSCJAG00000017628PABPC1L9966.828Callithrix_jacchus
ENSLBEG00000010084pabpc1l6178.161ENSCJAG00000038506-10078.161Callithrix_jacchus
ENSLBEG00000010084pabpc1l9962.751ENSCAFG00000009573PABPC1L10062.751Canis_familiaris
ENSLBEG00000010084pabpc1l9966.561ENSCAFG00020013828PABPC1L9966.561Canis_lupus_dingo
ENSLBEG00000010084pabpc1l9867.045ENSCHIG00000025759PABPC1L9167.045Capra_hircus
ENSLBEG00000010084pabpc1l9966.403ENSTSYG00000006645PABPC1L9966.403Carlito_syrichta
ENSLBEG00000010084pabpc1l9960.289ENSCAPG00000014519PABPC1L9960.289Cavia_aperea
ENSLBEG00000010084pabpc1l9963.217ENSCPOG00000013633PABPC1L9963.217Cavia_porcellus
ENSLBEG00000010084pabpc1l9966.088ENSCCAG00000023338PABPC1L9966.877Cebus_capucinus
ENSLBEG00000010084pabpc1l9967.192ENSCATG00000034065PABPC1L9967.508Cercocebus_atys
ENSLBEG00000010084pabpc1l9962.561ENSCLAG00000005298PABPC1L9863.333Chinchilla_lanigera
ENSLBEG00000010084pabpc1l9966.719ENSCSAG00000014242PABPC1L9967.035Chlorocebus_sabaeus
ENSLBEG00000010084pabpc1l7278.851ENSCPBG00000017755-9978.912Chrysemys_picta_bellii
ENSLBEG00000010084pabpc1l5788.235ENSCPBG00000007810-9188.235Chrysemys_picta_bellii
ENSLBEG00000010084pabpc1l8551.606ENSCING00000002796-9751.807Ciona_intestinalis
ENSLBEG00000010084pabpc1l9960.669ENSCSAVG00000004246-9666.102Ciona_savignyi
ENSLBEG00000010084pabpc1l9957.803ENSCSAVG00000003102-10083.221Ciona_savignyi
ENSLBEG00000010084pabpc1l9963.863ENSCANG00000037530PABPC1L9964.174Colobus_angolensis_palliatus
ENSLBEG00000010084pabpc1l9960.940ENSCGRG00001021938Pabpc1l9860.940Cricetulus_griseus_chok1gshd
ENSLBEG00000010084pabpc1l9960.940ENSCGRG00000007946Pabpc1l9860.940Cricetulus_griseus_crigri
ENSLBEG00000010084pabpc1l10076.795ENSCSEG00000021295pabpc1l10076.795Cynoglossus_semilaevis
ENSLBEG00000010084pabpc1l10086.306ENSCVAG00000015943-10086.306Cyprinodon_variegatus
ENSLBEG00000010084pabpc1l9978.503ENSDARG00000002597pabpc1l8894.615Danio_rerio
ENSLBEG00000010084pabpc1l9967.897ENSDNOG00000048450PABPC1L9967.594Dasypus_novemcinctus
ENSLBEG00000010084pabpc1l9964.610ENSDORG00000001067Pabpc1l9964.610Dipodomys_ordii
ENSLBEG00000010084pabpc1l9578.049ENSETEG00000009969PABPC1L7278.049Echinops_telfairi
ENSLBEG00000010084pabpc1l6485.119ENSEASG00005023408-10085.119Equus_asinus_asinus
ENSLBEG00000010084pabpc1l5665.027ENSEASG00005023407-7962.437Equus_asinus_asinus
ENSLBEG00000010084pabpc1l6664.977ENSECAG00000040139-8463.948Equus_caballus
ENSLBEG00000010084pabpc1l9965.280ENSEEUG00000005978PABPC1L9965.280Erinaceus_europaeus
ENSLBEG00000010084pabpc1l10081.081ENSELUG00000001811pabpc1l10081.081Esox_lucius
ENSLBEG00000010084pabpc1l9966.562ENSFCAG00000011692PABPC1L9966.562Felis_catus
ENSLBEG00000010084pabpc1l8471.161ENSFALG00000005372PABPC1L9765.077Ficedula_albicollis
ENSLBEG00000010084pabpc1l9963.360ENSFDAG00000008291PABPC1L9963.360Fukomys_damarensis
ENSLBEG00000010084pabpc1l10086.741ENSFHEG00000003398pabpc1l10086.741Fundulus_heteroclitus
ENSLBEG00000010084pabpc1l9980.990ENSGMOG00000004437pabpc1l9980.990Gadus_morhua
ENSLBEG00000010084pabpc1l9665.685ENSGALG00000004123PABPC1L9978.860Gallus_gallus
ENSLBEG00000010084pabpc1l10084.825ENSGAFG00000021057pabpc1l10084.825Gambusia_affinis
ENSLBEG00000010084pabpc1l9988.978ENSGACG00000002792pabpc1l10088.978Gasterosteus_aculeatus
ENSLBEG00000010084pabpc1l9972.397ENSGAGG00000000589PABPC1L9872.397Gopherus_agassizii
ENSLBEG00000010084pabpc1l9966.825ENSGGOG00000004584PABPC1L9967.035Gorilla_gorilla
ENSLBEG00000010084pabpc1l10089.297ENSHBUG00000006134pabpc1l10089.297Haplochromis_burtoni
ENSLBEG00000010084pabpc1l10063.349ENSHGLG00000008434PABPC1L9963.191Heterocephalus_glaber_female
ENSLBEG00000010084pabpc1l6084.831ENSHGLG00100019506-10084.831Heterocephalus_glaber_male
ENSLBEG00000010084pabpc1l10063.349ENSHGLG00100012151PABPC1L9963.191Heterocephalus_glaber_male
ENSLBEG00000010084pabpc1l9986.689ENSHCOG00000009270pabpc1l10086.689Hippocampus_comes
ENSLBEG00000010084pabpc1l5862.644ENSIPUG00000006780-9359.162Ictalurus_punctatus
ENSLBEG00000010084pabpc1l10077.583ENSIPUG00000012602pabpc1l10077.583Ictalurus_punctatus
ENSLBEG00000010084pabpc1l6161.326ENSIPUG00000006760-9161.326Ictalurus_punctatus
ENSLBEG00000010084pabpc1l9966.348ENSSTOG00000003739PABPC1L9966.348Ictidomys_tridecemlineatus
ENSLBEG00000010084pabpc1l9951.832ENSJJAG00000022406Pabpc1l9951.978Jaculus_jaculus
ENSLBEG00000010084pabpc1l10084.984ENSKMAG00000016847pabpc1l10084.984Kryptolebias_marmoratus
ENSLBEG00000010084pabpc1l9970.405ENSLACG00000005762PABPC1L9873.792Latimeria_chalumnae
ENSLBEG00000010084pabpc1l9979.715ENSLOCG00000007519pabpc1l9979.715Lepisosteus_oculatus
ENSLBEG00000010084pabpc1l9966.509ENSLAFG00000003553PABPC1L10066.509Loxodonta_africana
ENSLBEG00000010084pabpc1l9967.512ENSMFAG00000040365PABPC1L9967.152Macaca_fascicularis
ENSLBEG00000010084pabpc1l9966.878ENSMNEG00000032298PABPC1L9867.195Macaca_nemestrina
ENSLBEG00000010084pabpc1l9967.192ENSMLEG00000043139PABPC1L9967.508Mandrillus_leucophaeus
ENSLBEG00000010084pabpc1l9987.680ENSMAMG00000011854pabpc1l10087.680Mastacembelus_armatus
ENSLBEG00000010084pabpc1l10089.617ENSMZEG00005023713pabpc1l10089.617Maylandia_zebra
ENSLBEG00000010084pabpc1l9970.588ENSMGAG00000003674PABPC1L9970.588Meleagris_gallopavo
ENSLBEG00000010084pabpc1l9960.755ENSMOCG00000013186Pabpc1l9860.755Microtus_ochrogaster
ENSLBEG00000010084pabpc1l9988.000ENSMMOG00000020574-9988.000Mola_mola
ENSLBEG00000010084pabpc1l9769.732ENSMODG00000016198PABPC1L9969.732Monodelphis_domestica
ENSLBEG00000010084pabpc1l9987.481ENSMALG00000021622pabpc1l10088.797Monopterus_albus
ENSLBEG00000010084pabpc1l9960.591MGP_CAROLIEiJ_G0024627Pabpc1l9960.591Mus_caroli
ENSLBEG00000010084pabpc1l9960.591ENSMUSG00000054582Pabpc1l9960.591Mus_musculus
ENSLBEG00000010084pabpc1l10060.323MGP_PahariEiJ_G0026071Pabpc1l10060.323Mus_pahari
ENSLBEG00000010084pabpc1l9960.591MGP_SPRETEiJ_G0025549Pabpc1l9960.591Mus_spretus
ENSLBEG00000010084pabpc1l9966.614ENSMPUG00000017646PABPC1L9966.614Mustela_putorius_furo
ENSLBEG00000010084pabpc1l9864.865ENSMLUG00000006324PABPC1L9864.865Myotis_lucifugus
ENSLBEG00000010084pabpc1l9962.063ENSNGAG00000010458Pabpc1l9961.912Nannospalax_galili
ENSLBEG00000010084pabpc1l9991.686ENSNBRG00000016633pabpc1l10091.686Neolamprologus_brichardi
ENSLBEG00000010084pabpc1l9958.587ENSMEUG00000007905-9958.587Notamacropus_eugenii
ENSLBEG00000010084pabpc1l9966.561ENSOPRG00000011846PABPC1L9966.561Ochotona_princeps
ENSLBEG00000010084pabpc1l9960.365ENSODEG00000015482PABPC1L9960.365Octodon_degus
ENSLBEG00000010084pabpc1l5978.750ENSODEG00000002920-9778.750Octodon_degus
ENSLBEG00000010084pabpc1l10089.457ENSONIG00000017314pabpc1l10089.457Oreochromis_niloticus
ENSLBEG00000010084pabpc1l9061.228ENSOANG00000015793-10061.228Ornithorhynchus_anatinus
ENSLBEG00000010084pabpc1l9963.485ENSOCUG00000003005PABPC1L9963.485Oryctolagus_cuniculus
ENSLBEG00000010084pabpc1l10085.304ENSORLG00000010322pabpc1l9890.571Oryzias_latipes
ENSLBEG00000010084pabpc1l10084.824ENSORLG00020021193pabpc1l9890.571Oryzias_latipes_hni
ENSLBEG00000010084pabpc1l10085.304ENSORLG00015017018pabpc1l9890.571Oryzias_latipes_hsok
ENSLBEG00000010084pabpc1l10084.275ENSOMEG00000010789pabpc1l10084.275Oryzias_melastigma
ENSLBEG00000010084pabpc1l9966.349ENSOGAG00000032999PABPC1L9966.349Otolemur_garnettii
ENSLBEG00000010084pabpc1l9967.147ENSOARG00000004578PABPC1L9967.040Ovis_aries
ENSLBEG00000010084pabpc1l9966.877ENSPPAG00000039677PABPC1L9967.192Pan_paniscus
ENSLBEG00000010084pabpc1l6467.593ENSPPRG00000019327-9867.593Panthera_pardus
ENSLBEG00000010084pabpc1l9866.826ENSPTIG00000006524PABPC1L9966.826Panthera_tigris_altaica
ENSLBEG00000010084pabpc1l6476.543ENSPTRG00000013531PABPC1L9976.543Pan_troglodytes
ENSLBEG00000010084pabpc1l9967.192ENSPANG00000018788PABPC1L9967.508Papio_anubis
ENSLBEG00000010084pabpc1l10078.855ENSPKIG00000007322pabpc1l10078.855Paramormyrops_kingsleyae
ENSLBEG00000010084pabpc1l5583.969ENSPKIG00000016810-9383.969Paramormyrops_kingsleyae
ENSLBEG00000010084pabpc1l6980.576ENSPSIG00000013289PABPC1L9980.576Pelodiscus_sinensis
ENSLBEG00000010084pabpc1l7186.813ENSPMGG00000023121-9185.641Periophthalmus_magnuspinnatus
ENSLBEG00000010084pabpc1l6494.697ENSPMGG00000023117pabpc1l9994.697Periophthalmus_magnuspinnatus
ENSLBEG00000010084pabpc1l9960.552ENSPEMG00000020671Pabpc1l9860.552Peromyscus_maniculatus_bairdii
ENSLBEG00000010084pabpc1l10087.700ENSPFOG00000013241pabpc1l10087.700Poecilia_formosa
ENSLBEG00000010084pabpc1l5496.923ENSPLAG00000023686-9296.923Poecilia_latipinna
ENSLBEG00000010084pabpc1l10087.380ENSPLAG00000017490-10087.380Poecilia_latipinna
ENSLBEG00000010084pabpc1l10087.700ENSPMEG00000007677pabpc1l10087.700Poecilia_mexicana
ENSLBEG00000010084pabpc1l5496.923ENSPMEG00000009185-8896.923Poecilia_mexicana
ENSLBEG00000010084pabpc1l6992.944ENSPREG00000015886pabpc1l9992.944Poecilia_reticulata
ENSLBEG00000010084pabpc1l9966.877ENSPPYG00000011042PABPC1L9967.192Pongo_abelii
ENSLBEG00000010084pabpc1l6382.812ENSPCAG00000011787-7582.812Procavia_capensis
ENSLBEG00000010084pabpc1l9966.509ENSPCOG00000020630PABPC1L9966.509Propithecus_coquereli
ENSLBEG00000010084pabpc1l9965.819ENSPVAG00000012663PABPC1L9965.819Pteropus_vampyrus
ENSLBEG00000010084pabpc1l9991.924ENSPNYG00000004101pabpc1l10091.924Pundamilia_nyererei
ENSLBEG00000010084pabpc1l10072.698ENSPNAG00000021248pabpc1l10072.698Pygocentrus_nattereri
ENSLBEG00000010084pabpc1l9960.261ENSRNOG00000012750Pabpc1l9960.552Rattus_norvegicus
ENSLBEG00000010084pabpc1l9966.877ENSRBIG00000035381PABPC1L9967.192Rhinopithecus_bieti
ENSLBEG00000010084pabpc1l9966.719ENSRROG00000044498PABPC1L9967.035Rhinopithecus_roxellana
ENSLBEG00000010084pabpc1l9967.036ENSSBOG00000009532-9966.345Saimiri_boliviensis_boliviensis
ENSLBEG00000010084pabpc1l9864.200ENSSHAG00000011446PABPC1L10064.200Sarcophilus_harrisii
ENSLBEG00000010084pabpc1l10078.095ENSSFOG00015017304pabpc1l10078.095Scleropages_formosus
ENSLBEG00000010084pabpc1l10089.137ENSSMAG00000010516pabpc1l9897.030Scophthalmus_maximus
ENSLBEG00000010084pabpc1l10090.256ENSSDUG00000014743pabpc1l10090.256Seriola_dumerili
ENSLBEG00000010084pabpc1l9787.294ENSSLDG00000006981pabpc1l9892.694Seriola_lalandi_dorsalis
ENSLBEG00000010084pabpc1l9972.038ENSSPUG00000004233PABPC1L9972.038Sphenodon_punctatus
ENSLBEG00000010084pabpc1l10073.258ENSSPAG00000017137pabpc1l10077.500Stegastes_partitus
ENSLBEG00000010084pabpc1l9967.302ENSSSCG00000007382PABPC1L9967.302Sus_scrofa
ENSLBEG00000010084pabpc1l9970.236ENSTGUG00000005114PABPC1L9970.236Taeniopygia_guttata
ENSLBEG00000010084pabpc1l9787.315ENSTRUG00000011085pabpc1l9787.315Takifugu_rubripes
ENSLBEG00000010084pabpc1l9985.209ENSTNIG00000017903pabpc1l9885.209Tetraodon_nigroviridis
ENSLBEG00000010084pabpc1l9476.370ENSTBEG00000002851PABPC1L7976.370Tupaia_belangeri
ENSLBEG00000010084pabpc1l9464.107ENSTTRG00000007618PABPC1L10064.553Tursiops_truncatus
ENSLBEG00000010084pabpc1l9964.800ENSUAMG00000017682PABPC1L9964.800Ursus_americanus
ENSLBEG00000010084pabpc1l7070.133ENSUMAG00000025436PABPC1L9670.133Ursus_maritimus
ENSLBEG00000010084pabpc1l9874.704ENSVVUG00000018939PABPC1L9974.704Vulpes_vulpes
ENSLBEG00000010084pabpc1l9971.044ENSXETG00000022831pabpc1l9971.044Xenopus_tropicalis
ENSLBEG00000010084pabpc1l9890.670ENSXCOG00000005459pabpc1l9992.199Xiphophorus_couchianus
ENSLBEG00000010084pabpc1l10086.741ENSXMAG00000017135pabpc1l10086.741Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us