EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000010165 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10253 bases
Position: chrFKLU01000008.1:1108967-1119219
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	1	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	2	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	3	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	4	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	5	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	6	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	7	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	8	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	9	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	10	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	11	12
ENSLBEP00000013207	zf-C2H2	PF00096.26	4.5e-67	12	12
ENSLBEP00000013305	zf-C2H2	PF00096.26	4.3e-53	1	9
ENSLBEP00000013305	zf-C2H2	PF00096.26	4.3e-53	2	9
ENSLBEP00000013305	zf-C2H2	PF00096.26	4.3e-53	3	9
ENSLBEP00000013305	zf-C2H2	PF00096.26	4.3e-53	4	9
ENSLBEP00000013305	zf-C2H2	PF00096.26	4.3e-53	5	9
ENSLBEP00000013305	zf-C2H2	PF00096.26	4.3e-53	6	9
ENSLBEP00000013305	zf-C2H2	PF00096.26	4.3e-53	7	9
ENSLBEP00000013305	zf-C2H2	PF00096.26	4.3e-53	8	9
ENSLBEP00000013305	zf-C2H2	PF00096.26	4.3e-53	9	9
ENSLBEP00000013207	zf-met	PF12874.7	1e-20	1	3
ENSLBEP00000013207	zf-met	PF12874.7	1e-20	2	3
ENSLBEP00000013207	zf-met	PF12874.7	1e-20	3	3
ENSLBEP00000013305	zf-met	PF12874.7	1.4e-19	1	2
ENSLBEP00000013305	zf-met	PF12874.7	1.4e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000014006	-	1101	-	ENSLBEP00000013305	366 (aa)	-	-
ENSLBET00000013907	-	3506	-	ENSLBEP00000013207	695 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000010165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000010165	-	90	43.434	ENSLBEG00000011028	-	85	43.434
ENSLBEG00000010165	-	90	44.983	ENSLBEG00000004833	-	77	43.558
ENSLBEG00000010165	-	98	50.340	ENSLBEG00000001920	-	97	50.340
ENSLBEG00000010165	-	89	37.540	ENSLBEG00000013235	-	94	40.833
ENSLBEG00000010165	-	94	38.519	ENSLBEG00000021260	-	91	44.937
ENSLBEG00000010165	-	97	45.317	ENSLBEG00000013570	-	99	47.104
ENSLBEG00000010165	-	90	32.039	ENSLBEG00000014195	-	61	32.402
ENSLBEG00000010165	-	92	41.463	ENSLBEG00000017407	-	56	40.566
ENSLBEG00000010165	-	99	45.570	ENSLBEG00000019067	zbtb47b	57	45.570
ENSLBEG00000010165	-	92	47.059	ENSLBEG00000010278	-	97	46.957
ENSLBEG00000010165	-	89	45.192	ENSLBEG00000011250	-	74	46.377
ENSLBEG00000010165	-	93	44.444	ENSLBEG00000010132	-	79	40.351
ENSLBEG00000010165	-	89	41.692	ENSLBEG00000011313	-	72	44.304
ENSLBEG00000010165	-	89	48.000	ENSLBEG00000012947	-	94	48.000
ENSLBEG00000010165	-	90	37.815	ENSLBEG00000011006	-	52	47.273
ENSLBEG00000010165	-	89	43.253	ENSLBEG00000004805	-	81	44.872
ENSLBEG00000010165	-	97	45.918	ENSLBEG00000008115	-	96	44.681
ENSLBEG00000010165	-	93	37.910	ENSLBEG00000008439	znf319b	83	41.611
ENSLBEG00000010165	-	90	42.857	ENSLBEG00000015040	wt1a	53	42.857
ENSLBEG00000010165	-	89	44.059	ENSLBEG00000012201	-	68	44.565
ENSLBEG00000010165	-	95	40.376	ENSLBEG00000005715	-	75	47.458
ENSLBEG00000010165	-	90	51.124	ENSLBEG00000017450	-	86	51.124
ENSLBEG00000010165	-	90	44.444	ENSLBEG00000022939	-	53	43.373
ENSLBEG00000010165	-	90	50.228	ENSLBEG00000011145	si:cabz01071911.3	86	48.800
ENSLBEG00000010165	-	89	45.669	ENSLBEG00000017726	-	96	49.383
ENSLBEG00000010165	-	89	51.389	ENSLBEG00000001715	-	100	53.731
ENSLBEG00000010165	-	92	43.465	ENSLBEG00000011091	si:cabz01071911.3	97	45.020
ENSLBEG00000010165	-	98	34.857	ENSLBEG00000009419	zbtb41	58	40.260
ENSLBEG00000010165	-	92	42.609	ENSLBEG00000028243	-	88	42.424
ENSLBEG00000010165	-	90	48.485	ENSLBEG00000026373	e4f1	55	39.474
ENSLBEG00000010165	-	92	40.244	ENSLBEG00000017424	-	97	40.244
ENSLBEG00000010165	-	92	50.000	ENSLBEG00000014211	-	90	50.000
ENSLBEG00000010165	-	76	39.286	ENSLBEG00000006082	zgc:171929	85	38.182
ENSLBEG00000010165	-	90	45.105	ENSLBEG00000018970	-	80	46.429
ENSLBEG00000010165	-	90	39.510	ENSLBEG00000008320	-	60	43.119
ENSLBEG00000010165	-	88	53.846	ENSLBEG00000020461	-	57	54.054
ENSLBEG00000010165	-	84	46.364	ENSLBEG00000007937	-	66	46.364
ENSLBEG00000010165	-	91	40.698	ENSLBEG00000013821	hic2	54	40.698
ENSLBEG00000010165	-	93	41.667	ENSLBEG00000010933	-	50	42.105
ENSLBEG00000010165	-	87	43.421	ENSLBEG00000015419	scrt2	55	43.421
ENSLBEG00000010165	-	91	43.750	ENSLBEG00000000369	-	99	44.785
ENSLBEG00000010165	-	95	45.833	ENSLBEG00000020128	-	95	52.000
ENSLBEG00000010165	-	90	44.872	ENSLBEG00000007251	-	81	44.872
ENSLBEG00000010165	-	89	46.512	ENSLBEG00000016666	znf341	50	46.512
ENSLBEG00000010165	-	96	44.828	ENSLBEG00000024737	-	98	43.621
ENSLBEG00000010165	-	87	51.282	ENSLBEG00000025139	-	75	47.059
ENSLBEG00000010165	-	92	41.964	ENSLBEG00000012438	ZNF319	92	41.304
ENSLBEG00000010165	-	97	43.590	ENSLBEG00000001132	-	99	44.099
ENSLBEG00000010165	-	90	44.910	ENSLBEG00000015264	-	87	42.073
ENSLBEG00000010165	-	89	50.000	ENSLBEG00000011588	-	86	50.000
ENSLBEG00000010165	-	87	43.421	ENSLBEG00000023388	-	54	43.421
ENSLBEG00000010165	-	89	44.022	ENSLBEG00000026457	-	99	47.619
ENSLBEG00000010165	-	96	44.776	ENSLBEG00000011465	-	96	44.565
ENSLBEG00000010165	-	89	36.397	ENSLBEG00000009567	-	79	45.631
ENSLBEG00000010165	-	87	41.935	ENSLBEG00000002594	-	87	41.441
ENSLBEG00000010165	-	89	41.709	ENSLBEG00000025689	-	68	42.683
ENSLBEG00000010165	-	90	47.742	ENSLBEG00000006924	-	99	47.742
ENSLBEG00000010165	-	98	36.667	ENSLBEG00000012151	zbtb48	53	38.519
ENSLBEG00000010165	-	95	35.897	ENSLBEG00000027993	-	88	35.377
ENSLBEG00000010165	-	90	44.828	ENSLBEG00000011349	-	78	46.364
ENSLBEG00000010165	-	91	37.879	ENSLBEG00000000972	snai2	59	41.667
ENSLBEG00000010165	-	91	48.980	ENSLBEG00000002357	-	95	48.092
ENSLBEG00000010165	-	98	41.912	ENSLBEG00000009580	-	83	42.568
ENSLBEG00000010165	-	90	37.168	ENSLBEG00000006963	-	65	37.168
ENSLBEG00000010165	-	98	47.059	ENSLBEG00000024509	-	98	46.988
ENSLBEG00000010165	-	89	45.320	ENSLBEG00000000373	-	78	46.626
ENSLBEG00000010165	-	89	44.304	ENSLBEG00000009663	-	50	45.455
ENSLBEG00000010165	-	90	42.593	ENSLBEG00000017605	snai1a	58	39.604
ENSLBEG00000010165	-	89	47.442	ENSLBEG00000000435	-	78	48.077
ENSLBEG00000010165	-	92	30.968	ENSLBEG00000013197	PRDM15	54	30.435
ENSLBEG00000010165	-	89	48.503	ENSLBEG00000008850	-	56	50.000
ENSLBEG00000010165	-	90	42.581	ENSLBEG00000027776	gfi1ab	51	42.581
ENSLBEG00000010165	-	89	47.436	ENSLBEG00000007106	-	76	46.067
ENSLBEG00000010165	-	89	45.631	ENSLBEG00000008909	-	97	45.455
ENSLBEG00000010165	-	89	48.235	ENSLBEG00000014263	-	57	50.376
ENSLBEG00000010165	-	96	41.124	ENSLBEG00000008689	-	99	43.636
ENSLBEG00000010165	-	89	42.188	ENSLBEG00000011986	-	91	42.442
ENSLBEG00000010165	-	89	47.059	ENSLBEG00000024458	-	82	47.222
ENSLBEG00000010165	-	92	47.059	ENSLBEG00000006161	-	90	50.000
ENSLBEG00000010165	-	92	45.055	ENSLBEG00000005307	znf236	80	40.000
ENSLBEG00000010165	-	89	46.429	ENSLBEG00000022059	-	79	46.429
ENSLBEG00000010165	-	95	38.028	ENSLBEG00000016562	znf646	91	39.130
ENSLBEG00000010165	-	90	51.852	ENSLBEG00000001756	-	98	44.970
ENSLBEG00000010165	-	95	51.282	ENSLBEG00000008606	-	95	51.282
ENSLBEG00000010165	-	89	46.890	ENSLBEG00000004892	-	85	49.138
ENSLBEG00000010165	-	87	43.077	ENSLBEG00000026573	-	74	46.154
ENSLBEG00000010165	-	93	46.835	ENSLBEG00000005729	znf652	91	40.698
ENSLBEG00000010165	-	89	42.544	ENSLBEG00000024536	-	91	41.525
ENSLBEG00000010165	-	90	45.500	ENSLBEG00000015694	-	92	46.835
ENSLBEG00000010165	-	96	41.379	ENSLBEG00000002278	-	99	43.226
ENSLBEG00000010165	-	88	43.038	ENSLBEG00000014676	-	79	39.241
ENSLBEG00000010165	-	90	50.633	ENSLBEG00000011289	-	61	50.633
ENSLBEG00000010165	-	91	40.741	ENSLBEG00000025305	-	90	40.741
ENSLBEG00000010165	-	90	48.780	ENSLBEG00000004867	-	68	48.780
ENSLBEG00000010165	-	89	45.050	ENSLBEG00000000393	-	70	45.050
ENSLBEG00000010165	-	89	44.223	ENSLBEG00000000343	-	75	49.123
ENSLBEG00000010165	-	90	42.017	ENSLBEG00000002082	wt1b	57	42.017
ENSLBEG00000010165	-	90	33.140	ENSLBEG00000024749	hinfp	50	33.846
ENSLBEG00000010165	-	89	43.318	ENSLBEG00000020747	-	95	46.108
ENSLBEG00000010165	-	89	47.059	ENSLBEG00000014282	-	84	44.898
ENSLBEG00000010165	-	90	40.625	ENSLBEG00000011210	-	58	44.604
ENSLBEG00000010165	-	89	45.810	ENSLBEG00000007837	-	88	48.529
ENSLBEG00000010165	-	95	37.538	ENSLBEG00000018509	-	93	45.968
ENSLBEG00000010165	-	86	47.222	ENSLBEG00000011751	znf526	64	47.222
ENSLBEG00000010165	-	93	40.237	ENSLBEG00000022736	prdm5	85	41.964
ENSLBEG00000010165	-	90	47.368	ENSLBEG00000011040	-	57	51.579
ENSLBEG00000010165	-	90	41.553	ENSLBEG00000025696	-	87	43.558
ENSLBEG00000010165	-	92	40.741	ENSLBEG00000020297	gfi1b	61	40.741
ENSLBEG00000010165	-	63	43.210	ENSLBEG00000020291	si:dkey-89b17.4	80	43.210
ENSLBEG00000010165	-	96	35.443	ENSLBEG00000028271	-	83	40.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000010165	-	99	83.333	ENSAPOG00000002213	-	100	83.333	Acanthochromis_polyacanthus
ENSLBEG00000010165	-	93	92.275	ENSACIG00000013163	-	93	88.435	Amphilophus_citrinellus
ENSLBEG00000010165	-	90	37.429	ENSACIG00000013149	-	84	43.023	Amphilophus_citrinellus
ENSLBEG00000010165	-	94	89.916	ENSAOCG00000013124	-	100	82.927	Amphiprion_ocellaris
ENSLBEG00000010165	-	93	89.916	ENSAPEG00000009997	-	100	83.190	Amphiprion_percula
ENSLBEG00000010165	-	93	94.273	ENSATEG00000004127	-	95	98.718	Anabas_testudineus
ENSLBEG00000010165	-	98	92.704	ENSACLG00000005708	-	99	81.322	Astatotilapia_calliptera
ENSLBEG00000010165	-	90	77.366	ENSCVAG00000014734	-	96	74.182	Cyprinodon_variegatus
ENSLBEG00000010165	-	96	71.975	ENSFHEG00000014060	-	72	82.143	Fundulus_heteroclitus
ENSLBEG00000010165	-	94	75.562	ENSGMOG00000017526	-	92	75.562	Gadus_morhua
ENSLBEG00000010165	-	89	90.377	ENSGAFG00000011174	-	87	90.377	Gambusia_affinis
ENSLBEG00000010165	-	94	94.650	ENSGACG00000019550	-	100	94.650	Gasterosteus_aculeatus
ENSLBEG00000010165	-	98	92.704	ENSHBUG00000006662	-	99	81.322	Haplochromis_burtoni
ENSLBEG00000010165	-	99	79.933	ENSHCOG00000003041	-	96	83.333	Hippocampus_comes
ENSLBEG00000010165	-	94	92.070	ENSKMAG00000009979	-	85	92.070	Kryptolebias_marmoratus
ENSLBEG00000010165	-	89	89.619	ENSMAMG00000006312	-	100	96.538	Mastacembelus_armatus
ENSLBEG00000010165	-	98	92.704	ENSMZEG00005013913	-	99	81.322	Maylandia_zebra
ENSLBEG00000010165	-	90	95.312	ENSMMOG00000011282	-	94	94.071	Mola_mola
ENSLBEG00000010165	-	99	82.640	ENSMALG00000000494	-	100	82.640	Monopterus_albus
ENSLBEG00000010165	-	81	87.562	ENSNBRG00000007602	-	99	87.562	Neolamprologus_brichardi
ENSLBEG00000010165	-	86	90.654	ENSONIG00000003856	-	99	90.654	Oreochromis_niloticus
ENSLBEG00000010165	-	93	92.511	ENSORLG00000010117	-	87	92.511	Oryzias_latipes
ENSLBEG00000010165	-	93	92.511	ENSORLG00020000219	-	87	92.511	Oryzias_latipes_hni
ENSLBEG00000010165	-	93	92.070	ENSORLG00015000258	-	100	88.000	Oryzias_latipes_hsok
ENSLBEG00000010165	-	93	92.511	ENSOMEG00000018262	-	96	86.380	Oryzias_melastigma
ENSLBEG00000010165	-	99	54.054	ENSPFOG00000013455	-	97	58.333	Poecilia_formosa
ENSLBEG00000010165	-	93	89.121	ENSPLAG00000004027	-	89	82.550	Poecilia_latipinna
ENSLBEG00000010165	-	93	89.958	ENSPMEG00000007589	-	87	89.958	Poecilia_mexicana
ENSLBEG00000010165	-	90	95.769	ENSPREG00000000153	-	91	95.769	Poecilia_reticulata
ENSLBEG00000010165	-	98	88.017	ENSPNYG00000007814	-	97	88.017	Pundamilia_nyererei
ENSLBEG00000010165	-	94	41.667	ENSPNYG00000007781	-	99	39.355	Pundamilia_nyererei
ENSLBEG00000010165	-	93	96.000	ENSSMAG00000021251	-	98	96.000	Scophthalmus_maximus
ENSLBEG00000010165	-	97	92.704	ENSSDUG00000013904	-	100	84.648	Seriola_dumerili
ENSLBEG00000010165	-	97	93.133	ENSSLDG00000006994	-	100	85.079	Seriola_lalandi_dorsalis
ENSLBEG00000010165	-	93	92.275	ENSSPAG00000011524	-	100	83.190	Stegastes_partitus
ENSLBEG00000010165	-	97	88.060	ENSTRUG00000015687	-	98	91.282	Takifugu_rubripes
ENSLBEG00000010165	-	89	91.892	ENSTNIG00000008242	-	100	91.892	Tetraodon_nigroviridis
ENSLBEG00000010165	-	89	73.779	ENSXCOG00000015947	-	96	93.893	Xiphophorus_couchianus
ENSLBEG00000010165	-	92	94.656	ENSXMAG00000023291	-	99	94.656	Xiphophorus_maculatus