EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000010201 (Gene tree)
Gene ID: 109993026
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4098 bases
Position: chrFKLU01000246.1:228019-232116
Accession: 109993026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000013255	Clp1	PF06807.14	1.6e-28	1	1
ENSLBEP00000013286	Clp1	PF06807.14	1.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000013956	-	2898	XM_020645839	ENSLBEP00000013255	441 (aa)	XP_020501495	UPI0009B406B6
ENSLBET00000013987	-	1338	-	ENSLBEP00000013286	445 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000010201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000010201	clp1	99	76.322	ENSG00000172409	CLP1	99	76.798	Homo_sapiens
ENSLBEG00000010201	clp1	100	95.692	ENSAPOG00000008242	clp1	100	95.692	Acanthochromis_polyacanthus
ENSLBEG00000010201	clp1	99	76.092	ENSAMEG00000014551	CLP1	99	76.092	Ailuropoda_melanoleuca
ENSLBEG00000010201	clp1	100	95.692	ENSACIG00000006310	clp1	99	95.692	Amphilophus_citrinellus
ENSLBEG00000010201	clp1	100	96.145	ENSAOCG00000010681	clp1	100	96.145	Amphiprion_ocellaris
ENSLBEG00000010201	clp1	100	96.145	ENSAPEG00000012165	clp1	100	96.145	Amphiprion_percula
ENSLBEG00000010201	clp1	100	96.825	ENSATEG00000012374	clp1	100	96.825	Anabas_testudineus
ENSLBEG00000010201	clp1	98	75.926	ENSACAG00000007139	CLP1	99	75.926	Anolis_carolinensis
ENSLBEG00000010201	clp1	99	76.322	ENSANAG00000034935	CLP1	99	76.798	Aotus_nancymaae
ENSLBEG00000010201	clp1	100	96.145	ENSACLG00000013573	clp1	100	96.145	Astatotilapia_calliptera
ENSLBEG00000010201	clp1	95	87.972	ENSAMXG00000014194	clp1	98	87.972	Astyanax_mexicanus
ENSLBEG00000010201	clp1	98	76.334	ENSBTAG00000006493	CLP1	99	76.334	Bos_taurus
ENSLBEG00000010201	clp1	95	47.518	WBGene00010304	clpf-1	97	47.518	Caenorhabditis_elegans
ENSLBEG00000010201	clp1	99	76.322	ENSCJAG00000008748	CLP1	99	76.798	Callithrix_jacchus
ENSLBEG00000010201	clp1	98	76.334	ENSCAFG00000007815	CLP1	99	76.334	Canis_familiaris
ENSLBEG00000010201	clp1	98	76.334	ENSCAFG00020000903	CLP1	99	76.334	Canis_lupus_dingo
ENSLBEG00000010201	clp1	98	76.566	ENSCHIG00000023497	CLP1	99	76.566	Capra_hircus
ENSLBEG00000010201	clp1	99	76.322	ENSTSYG00000006824	CLP1	99	76.322	Carlito_syrichta
ENSLBEG00000010201	clp1	99	75.862	ENSCAPG00000009703	CLP1	99	75.862	Cavia_aperea
ENSLBEG00000010201	clp1	96	77.358	ENSCPOG00000012554	CLP1	99	77.358	Cavia_porcellus
ENSLBEG00000010201	clp1	99	76.092	ENSCCAG00000031957	CLP1	99	76.092	Cebus_capucinus
ENSLBEG00000010201	clp1	100	75.283	ENSCATG00000044628	CLP1	99	76.798	Cercocebus_atys
ENSLBEG00000010201	clp1	98	76.566	ENSCLAG00000004094	CLP1	99	76.566	Chinchilla_lanigera
ENSLBEG00000010201	clp1	98	76.798	ENSCSAG00000005994	CLP1	99	76.798	Chlorocebus_sabaeus
ENSLBEG00000010201	clp1	98	75.926	ENSCPBG00000016843	CLP1	99	75.926	Chrysemys_picta_bellii
ENSLBEG00000010201	clp1	96	62.648	ENSCING00000003779	-	97	62.648	Ciona_intestinalis
ENSLBEG00000010201	clp1	95	63.636	ENSCSAVG00000003437	-	96	63.636	Ciona_savignyi
ENSLBEG00000010201	clp1	99	76.322	ENSCANG00000034335	CLP1	99	76.798	Colobus_angolensis_palliatus
ENSLBEG00000010201	clp1	98	75.926	ENSCGRG00001002227	CLP1	99	75.926	Cricetulus_griseus_chok1gshd
ENSLBEG00000010201	clp1	98	75.926	ENSCGRG00000004328	CLP1	99	75.926	Cricetulus_griseus_crigri
ENSLBEG00000010201	clp1	100	92.971	ENSCSEG00000008614	clp1	100	92.971	Cynoglossus_semilaevis
ENSLBEG00000010201	clp1	100	94.104	ENSCVAG00000020101	clp1	100	94.104	Cyprinodon_variegatus
ENSLBEG00000010201	clp1	100	84.305	ENSDARG00000063663	clp1	100	84.753	Danio_rerio
ENSLBEG00000010201	clp1	98	75.982	ENSDNOG00000042415	CLP1	90	75.982	Dasypus_novemcinctus
ENSLBEG00000010201	clp1	98	76.102	ENSDORG00000014685	Clp1	99	76.102	Dipodomys_ordii
ENSLBEG00000010201	clp1	95	54.306	FBgn0033842	cbc	97	54.306	Drosophila_melanogaster
ENSLBEG00000010201	clp1	98	76.566	ENSETEG00000003009	CLP1	99	76.566	Echinops_telfairi
ENSLBEG00000010201	clp1	98	65.893	ENSEBUG00000011648	clp1	99	65.893	Eptatretus_burgeri
ENSLBEG00000010201	clp1	98	76.798	ENSEASG00005002093	CLP1	99	76.798	Equus_asinus_asinus
ENSLBEG00000010201	clp1	99	76.552	ENSECAG00000011597	CLP1	99	76.798	Equus_caballus
ENSLBEG00000010201	clp1	96	76.887	ENSEEUG00000012771	CLP1	98	76.887	Erinaceus_europaeus
ENSLBEG00000010201	clp1	100	86.771	ENSELUG00000024048	clp1	100	86.771	Esox_lucius
ENSLBEG00000010201	clp1	99	76.092	ENSFCAG00000006633	CLP1	99	76.334	Felis_catus
ENSLBEG00000010201	clp1	98	75.463	ENSFALG00000011145	CLP1	99	75.463	Ficedula_albicollis
ENSLBEG00000010201	clp1	98	76.566	ENSFDAG00000000234	CLP1	99	76.566	Fukomys_damarensis
ENSLBEG00000010201	clp1	100	94.558	ENSFHEG00000014760	CLP1	100	94.558	Fundulus_heteroclitus
ENSLBEG00000010201	clp1	100	90.703	ENSGMOG00000019340	clp1	100	90.703	Gadus_morhua
ENSLBEG00000010201	clp1	98	75.694	ENSGALG00000007370	CLP1	99	75.694	Gallus_gallus
ENSLBEG00000010201	clp1	100	94.104	ENSGAFG00000003020	clp1	100	94.104	Gambusia_affinis
ENSLBEG00000010201	clp1	100	96.145	ENSGACG00000017832	clp1	100	96.145	Gasterosteus_aculeatus
ENSLBEG00000010201	clp1	98	75.926	ENSGAGG00000013279	CLP1	99	75.926	Gopherus_agassizii
ENSLBEG00000010201	clp1	99	76.322	ENSGGOG00000023006	CLP1	99	76.798	Gorilla_gorilla
ENSLBEG00000010201	clp1	100	96.372	ENSHBUG00000010436	clp1	100	96.372	Haplochromis_burtoni
ENSLBEG00000010201	clp1	98	76.566	ENSHGLG00000009914	CLP1	99	76.566	Heterocephalus_glaber_female
ENSLBEG00000010201	clp1	98	76.566	ENSHGLG00100006105	CLP1	99	76.566	Heterocephalus_glaber_male
ENSLBEG00000010201	clp1	100	95.238	ENSHCOG00000010072	clp1	100	95.238	Hippocampus_comes
ENSLBEG00000010201	clp1	100	84.187	ENSIPUG00000016238	clp1	99	84.187	Ictalurus_punctatus
ENSLBEG00000010201	clp1	98	76.566	ENSSTOG00000029257	CLP1	99	76.566	Ictidomys_tridecemlineatus
ENSLBEG00000010201	clp1	98	76.102	ENSJJAG00000023691	Clp1	99	76.102	Jaculus_jaculus
ENSLBEG00000010201	clp1	100	94.331	ENSKMAG00000011990	clp1	100	94.331	Kryptolebias_marmoratus
ENSLBEG00000010201	clp1	96	76.651	ENSLACG00000003160	CLP1	98	76.651	Latimeria_chalumnae
ENSLBEG00000010201	clp1	71	86.957	ENSLOCG00000008074	clp1	100	87.346	Lepisosteus_oculatus
ENSLBEG00000010201	clp1	98	76.334	ENSLAFG00000014907	CLP1	99	76.334	Loxodonta_africana
ENSLBEG00000010201	clp1	99	76.322	ENSMFAG00000046074	CLP1	99	76.798	Macaca_fascicularis
ENSLBEG00000010201	clp1	99	76.322	ENSMMUG00000038007	CLP1	99	76.322	Macaca_mulatta
ENSLBEG00000010201	clp1	98	76.798	ENSMNEG00000000259	CLP1	99	76.798	Macaca_nemestrina
ENSLBEG00000010201	clp1	99	76.322	ENSMLEG00000043556	CLP1	99	76.798	Mandrillus_leucophaeus
ENSLBEG00000010201	clp1	100	96.825	ENSMAMG00000002149	clp1	100	96.825	Mastacembelus_armatus
ENSLBEG00000010201	clp1	100	96.145	ENSMZEG00005002850	clp1	100	96.145	Maylandia_zebra
ENSLBEG00000010201	clp1	98	75.694	ENSMGAG00000009643	CLP1	99	75.694	Meleagris_gallopavo
ENSLBEG00000010201	clp1	98	75.463	ENSMAUG00000016261	Clp1	99	75.463	Mesocricetus_auratus
ENSLBEG00000010201	clp1	99	75.626	ENSMICG00000004895	CLP1	99	76.334	Microcebus_murinus
ENSLBEG00000010201	clp1	98	76.157	ENSMOCG00000005498	Clp1	99	76.157	Microtus_ochrogaster
ENSLBEG00000010201	clp1	100	94.785	ENSMMOG00000003229	clp1	100	94.785	Mola_mola
ENSLBEG00000010201	clp1	99	76.092	ENSMODG00000020107	-	99	76.092	Monodelphis_domestica
ENSLBEG00000010201	clp1	99	76.092	ENSMODG00000024148	-	99	76.092	Monodelphis_domestica
ENSLBEG00000010201	clp1	100	95.692	ENSMALG00000014239	clp1	100	95.692	Monopterus_albus
ENSLBEG00000010201	clp1	98	75.926	MGP_CAROLIEiJ_G0023726	Clp1	99	75.926	Mus_caroli
ENSLBEG00000010201	clp1	98	75.926	ENSMUSG00000027079	Clp1	99	75.926	Mus_musculus
ENSLBEG00000010201	clp1	98	75.694	MGP_PahariEiJ_G0025177	Clp1	99	75.694	Mus_pahari
ENSLBEG00000010201	clp1	98	75.926	MGP_SPRETEiJ_G0024646	Clp1	99	75.926	Mus_spretus
ENSLBEG00000010201	clp1	98	76.334	ENSMPUG00000000268	CLP1	99	76.334	Mustela_putorius_furo
ENSLBEG00000010201	clp1	99	76.322	ENSMLUG00000007904	CLP1	99	76.322	Myotis_lucifugus
ENSLBEG00000010201	clp1	98	76.102	ENSNGAG00000006165	Clp1	99	76.102	Nannospalax_galili
ENSLBEG00000010201	clp1	100	95.918	ENSNBRG00000005225	clp1	100	95.918	Neolamprologus_brichardi
ENSLBEG00000010201	clp1	80	70.703	ENSNLEG00000012809	-	99	70.703	Nomascus_leucogenys
ENSLBEG00000010201	clp1	98	76.037	ENSMEUG00000010949	CLP1	100	76.037	Notamacropus_eugenii
ENSLBEG00000010201	clp1	69	78.548	ENSOPRG00000007329	CLP1	100	78.548	Ochotona_princeps
ENSLBEG00000010201	clp1	98	76.566	ENSODEG00000011410	CLP1	99	76.566	Octodon_degus
ENSLBEG00000010201	clp1	100	95.918	ENSONIG00000005089	clp1	100	95.918	Oreochromis_niloticus
ENSLBEG00000010201	clp1	99	76.092	ENSOCUG00000007045	CLP1	99	76.092	Oryctolagus_cuniculus
ENSLBEG00000010201	clp1	100	93.651	ENSORLG00000003647	clp1	100	93.651	Oryzias_latipes
ENSLBEG00000010201	clp1	100	93.424	ENSORLG00020016676	clp1	100	93.424	Oryzias_latipes_hni
ENSLBEG00000010201	clp1	100	93.651	ENSORLG00015019484	clp1	100	93.651	Oryzias_latipes_hsok
ENSLBEG00000010201	clp1	100	93.424	ENSOMEG00000021303	clp1	100	93.424	Oryzias_melastigma
ENSLBEG00000010201	clp1	98	76.334	ENSOGAG00000004508	CLP1	99	76.334	Otolemur_garnettii
ENSLBEG00000010201	clp1	98	75.346	ENSOARG00000010145	CLP1	99	75.346	Ovis_aries
ENSLBEG00000010201	clp1	99	76.322	ENSPPAG00000041519	CLP1	99	76.798	Pan_paniscus
ENSLBEG00000010201	clp1	98	76.334	ENSPPRG00000006135	CLP1	99	76.334	Panthera_pardus
ENSLBEG00000010201	clp1	98	76.334	ENSPTIG00000015866	CLP1	99	76.334	Panthera_tigris_altaica
ENSLBEG00000010201	clp1	98	76.798	ENSPTRG00000047318	CLP1	99	76.798	Pan_troglodytes
ENSLBEG00000010201	clp1	99	76.322	ENSPANG00000017078	CLP1	98	76.322	Papio_anubis
ENSLBEG00000010201	clp1	100	86.517	ENSPKIG00000007697	clp1	100	86.517	Paramormyrops_kingsleyae
ENSLBEG00000010201	clp1	93	73.350	ENSPSIG00000005468	CLP1	99	73.350	Pelodiscus_sinensis
ENSLBEG00000010201	clp1	100	92.971	ENSPMGG00000012171	clp1	100	92.971	Periophthalmus_magnuspinnatus
ENSLBEG00000010201	clp1	98	76.157	ENSPEMG00000011213	-	99	76.157	Peromyscus_maniculatus_bairdii
ENSLBEG00000010201	clp1	95	68.884	ENSPMAG00000006707	clp1	97	68.884	Petromyzon_marinus
ENSLBEG00000010201	clp1	99	76.322	ENSPCIG00000011899	CLP1	99	76.322	Phascolarctos_cinereus
ENSLBEG00000010201	clp1	100	94.558	ENSPFOG00000008169	clp1	100	94.558	Poecilia_formosa
ENSLBEG00000010201	clp1	100	94.558	ENSPLAG00000022388	clp1	100	94.558	Poecilia_latipinna
ENSLBEG00000010201	clp1	100	94.558	ENSPMEG00000021088	clp1	100	94.558	Poecilia_mexicana
ENSLBEG00000010201	clp1	100	94.558	ENSPREG00000017802	clp1	100	94.558	Poecilia_reticulata
ENSLBEG00000010201	clp1	52	75.546	ENSPPYG00000003266	-	100	75.546	Pongo_abelii
ENSLBEG00000010201	clp1	99	76.092	ENSPCOG00000000360	CLP1	99	76.092	Propithecus_coquereli
ENSLBEG00000010201	clp1	98	76.334	ENSPVAG00000016270	CLP1	99	76.334	Pteropus_vampyrus
ENSLBEG00000010201	clp1	100	96.372	ENSPNYG00000017274	clp1	99	96.372	Pundamilia_nyererei
ENSLBEG00000010201	clp1	100	85.714	ENSPNAG00000026460	clp1	100	86.384	Pygocentrus_nattereri
ENSLBEG00000010201	clp1	98	75.926	ENSRNOG00000007416	Clp1	99	75.926	Rattus_norvegicus
ENSLBEG00000010201	clp1	98	76.798	ENSRBIG00000018191	CLP1	99	76.798	Rhinopithecus_bieti
ENSLBEG00000010201	clp1	99	76.322	ENSRROG00000039265	CLP1	99	76.798	Rhinopithecus_roxellana
ENSLBEG00000010201	clp1	94	62.802	ENSSBOG00000010558	-	93	62.802	Saimiri_boliviensis_boliviensis
ENSLBEG00000010201	clp1	98	76.798	ENSSBOG00000032517	-	99	76.798	Saimiri_boliviensis_boliviensis
ENSLBEG00000010201	clp1	98	76.389	ENSSHAG00000015695	CLP1	99	76.389	Sarcophilus_harrisii
ENSLBEG00000010201	clp1	100	84.547	ENSSFOG00015000628	clp1	100	85.210	Scleropages_formosus
ENSLBEG00000010201	clp1	100	96.599	ENSSMAG00000019423	clp1	99	96.599	Scophthalmus_maximus
ENSLBEG00000010201	clp1	100	97.506	ENSSDUG00000014495	clp1	100	97.506	Seriola_dumerili
ENSLBEG00000010201	clp1	100	97.279	ENSSLDG00000000937	clp1	100	97.279	Seriola_lalandi_dorsalis
ENSLBEG00000010201	clp1	52	75.439	ENSSARG00000002459	CLP1	100	75.439	Sorex_araneus
ENSLBEG00000010201	clp1	98	75.231	ENSSPUG00000016811	CLP1	99	75.231	Sphenodon_punctatus
ENSLBEG00000010201	clp1	100	96.372	ENSSPAG00000016052	clp1	100	96.372	Stegastes_partitus
ENSLBEG00000010201	clp1	98	76.334	ENSSSCG00000031442	CLP1	99	76.334	Sus_scrofa
ENSLBEG00000010201	clp1	98	75.231	ENSTGUG00000007002	CLP1	99	75.231	Taeniopygia_guttata
ENSLBEG00000010201	clp1	100	92.063	ENSTRUG00000012602	clp1	100	92.063	Takifugu_rubripes
ENSLBEG00000010201	clp1	100	91.837	ENSTNIG00000013125	clp1	100	91.837	Tetraodon_nigroviridis
ENSLBEG00000010201	clp1	98	75.870	ENSTBEG00000009975	CLP1	99	75.870	Tupaia_belangeri
ENSLBEG00000010201	clp1	98	76.334	ENSTTRG00000002096	CLP1	99	76.334	Tursiops_truncatus
ENSLBEG00000010201	clp1	98	76.334	ENSUAMG00000011388	CLP1	99	76.334	Ursus_americanus
ENSLBEG00000010201	clp1	98	76.334	ENSUMAG00000018317	CLP1	99	76.334	Ursus_maritimus
ENSLBEG00000010201	clp1	100	75.283	ENSVVUG00000017138	CLP1	99	75.283	Vulpes_vulpes
ENSLBEG00000010201	clp1	100	71.106	ENSXETG00000007088	clp1	100	71.332	Xenopus_tropicalis
ENSLBEG00000010201	clp1	100	94.331	ENSXCOG00000002287	clp1	100	94.331	Xiphophorus_couchianus
ENSLBEG00000010201	clp1	100	94.331	ENSXMAG00000009783	clp1	100	94.331	Xiphophorus_maculatus