EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000010239 (Gene tree)
Gene ID: 109991889
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 47107 bases
Position: chrFKLU01000217.1:497552-544658
Accession: 109991889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000013297	DRY_EERY	PF09750.9	1.1e-31	1	1
ENSLBEP00000013297	Surp	PF01805.20	2.7e-27	1	2
ENSLBEP00000013297	Surp	PF01805.20	2.7e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000013998	-	3120	XM_020644314	ENSLBEP00000013297	893 (aa)	XP_020499970	-

Gene Model

Click here to download ENSLBEG00000010239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000010239	sfswap	72	60.058	ENSG00000061936	SFSWAP	67	79.012	Homo_sapiens
ENSLBEG00000010239	sfswap	78	82.714	ENSAPOG00000005784	sfswap	73	82.640	Acanthochromis_polyacanthus
ENSLBEG00000010239	sfswap	76	55.962	ENSAMEG00000013818	SFSWAP	75	56.011	Ailuropoda_melanoleuca
ENSLBEG00000010239	sfswap	77	82.235	ENSAOCG00000016469	sfswap	72	82.521	Amphiprion_ocellaris
ENSLBEG00000010239	sfswap	77	82.521	ENSAPEG00000004965	sfswap	73	82.808	Amphiprion_percula
ENSLBEG00000010239	sfswap	79	81.100	ENSATEG00000021053	sfswap	77	81.382	Anabas_testudineus
ENSLBEG00000010239	sfswap	69	57.871	ENSACAG00000007220	SFSWAP	73	58.084	Anolis_carolinensis
ENSLBEG00000010239	sfswap	74	58.192	ENSANAG00000001518	SFSWAP	73	57.538	Aotus_nancymaae
ENSLBEG00000010239	sfswap	78	80.456	ENSACLG00000020159	sfswap	76	80.171	Astatotilapia_calliptera
ENSLBEG00000010239	sfswap	76	65.320	ENSAMXG00000008657	sfswap	82	58.012	Astyanax_mexicanus
ENSLBEG00000010239	sfswap	74	58.520	ENSBTAG00000000439	SFSWAP	76	56.708	Bos_taurus
ENSLBEG00000010239	sfswap	74	59.605	ENSCJAG00000003613	SFSWAP	76	57.815	Callithrix_jacchus
ENSLBEG00000010239	sfswap	76	55.989	ENSCAFG00000006625	SFSWAP	75	56.680	Canis_familiaris
ENSLBEG00000010239	sfswap	66	50.081	ENSCAFG00020011254	SFSWAP	73	51.316	Canis_lupus_dingo
ENSLBEG00000010239	sfswap	74	57.821	ENSCHIG00000008838	SFSWAP	73	59.021	Capra_hircus
ENSLBEG00000010239	sfswap	71	60.352	ENSTSYG00000010303	SFSWAP	70	61.426	Carlito_syrichta
ENSLBEG00000010239	sfswap	67	59.225	ENSCAPG00000004394	SFSWAP	69	57.580	Cavia_aperea
ENSLBEG00000010239	sfswap	71	60.234	ENSCPOG00000005280	SFSWAP	70	58.815	Cavia_porcellus
ENSLBEG00000010239	sfswap	72	60.058	ENSCATG00000031094	SFSWAP	73	56.906	Cercocebus_atys
ENSLBEG00000010239	sfswap	74	58.592	ENSCLAG00000008380	SFSWAP	73	57.083	Chinchilla_lanigera
ENSLBEG00000010239	sfswap	72	60.058	ENSCSAG00000001884	SFSWAP	73	56.906	Chlorocebus_sabaeus
ENSLBEG00000010239	sfswap	63	59.823	ENSCHOG00000003578	SFSWAP	67	58.134	Choloepus_hoffmanni
ENSLBEG00000010239	sfswap	73	58.865	ENSCPBG00000024757	SFSWAP	70	57.725	Chrysemys_picta_bellii
ENSLBEG00000010239	sfswap	72	59.913	ENSCANG00000036501	SFSWAP	73	56.630	Colobus_angolensis_palliatus
ENSLBEG00000010239	sfswap	78	77.762	ENSCSEG00000003773	sfswap	74	77.762	Cynoglossus_semilaevis
ENSLBEG00000010239	sfswap	76	68.785	ENSDARG00000005980	sfswap	73	69.633	Danio_rerio
ENSLBEG00000010239	sfswap	71	60.352	ENSDNOG00000018742	SFSWAP	67	60.290	Dasypus_novemcinctus
ENSLBEG00000010239	sfswap	71	53.529	ENSDORG00000010352	Sfswap	71	51.371	Dipodomys_ordii
ENSLBEG00000010239	sfswap	62	37.826	ENSEBUG00000016748	SFSWAP	75	38.506	Eptatretus_burgeri
ENSLBEG00000010239	sfswap	72	59.657	ENSEASG00005016502	SFSWAP	73	57.183	Equus_asinus_asinus
ENSLBEG00000010239	sfswap	72	59.657	ENSECAG00000007657	SFSWAP	74	57.183	Equus_caballus
ENSLBEG00000010239	sfswap	59	59.884	ENSEEUG00000001713	SFSWAP	63	59.884	Erinaceus_europaeus
ENSLBEG00000010239	sfswap	75	66.985	ENSELUG00000010942	sfswap	93	62.739	Esox_lucius
ENSLBEG00000010239	sfswap	71	58.345	ENSFCAG00000010778	SFSWAP	70	59.104	Felis_catus
ENSLBEG00000010239	sfswap	71	61.884	ENSFALG00000009577	SFSWAP	71	60.653	Ficedula_albicollis
ENSLBEG00000010239	sfswap	71	60.704	ENSFDAG00000017235	SFSWAP	70	61.054	Fukomys_damarensis
ENSLBEG00000010239	sfswap	52	84.247	ENSGMOG00000009205	sfswap	51	84.932	Gadus_morhua
ENSLBEG00000010239	sfswap	78	77.952	ENSGAFG00000006272	sfswap	77	78.805	Gambusia_affinis
ENSLBEG00000010239	sfswap	73	69.516	ENSGACG00000017647	sfswap	79	67.432	Gasterosteus_aculeatus
ENSLBEG00000010239	sfswap	74	59.065	ENSGAGG00000002611	SFSWAP	70	58.251	Gopherus_agassizii
ENSLBEG00000010239	sfswap	74	58.898	ENSGGOG00000014877	SFSWAP	72	57.044	Gorilla_gorilla
ENSLBEG00000010239	sfswap	78	80.314	ENSHBUG00000005629	sfswap	75	80.029	Haplochromis_burtoni
ENSLBEG00000010239	sfswap	71	60.264	ENSHGLG00000019216	SFSWAP	70	58.696	Heterocephalus_glaber_female
ENSLBEG00000010239	sfswap	71	60.264	ENSHGLG00100019350	SFSWAP	70	58.466	Heterocephalus_glaber_male
ENSLBEG00000010239	sfswap	77	75.000	ENSHCOG00000009475	sfswap	74	74.929	Hippocampus_comes
ENSLBEG00000010239	sfswap	74	67.914	ENSIPUG00000010598	sfswap	78	68.839	Ictalurus_punctatus
ENSLBEG00000010239	sfswap	71	59.004	ENSSTOG00000000773	SFSWAP	73	56.546	Ictidomys_tridecemlineatus
ENSLBEG00000010239	sfswap	74	57.486	ENSJJAG00000006609	Sfswap	73	57.483	Jaculus_jaculus
ENSLBEG00000010239	sfswap	78	78.156	ENSKMAG00000013168	sfswap	72	79.149	Kryptolebias_marmoratus
ENSLBEG00000010239	sfswap	74	55.807	ENSLACG00000018678	SFSWAP	71	55.712	Latimeria_chalumnae
ENSLBEG00000010239	sfswap	72	59.913	ENSMFAG00000037352	SFSWAP	67	58.640	Macaca_fascicularis
ENSLBEG00000010239	sfswap	72	59.768	ENSMMUG00000020343	SFSWAP	71	58.782	Macaca_mulatta
ENSLBEG00000010239	sfswap	72	59.768	ENSMNEG00000041002	SFSWAP	71	58.782	Macaca_nemestrina
ENSLBEG00000010239	sfswap	72	58.576	ENSMLEG00000035728	SFSWAP	72	55.340	Mandrillus_leucophaeus
ENSLBEG00000010239	sfswap	78	83.688	ENSMAMG00000006631	sfswap	74	83.688	Mastacembelus_armatus
ENSLBEG00000010239	sfswap	78	80.456	ENSMZEG00005017834	SFSWAP	73	80.171	Maylandia_zebra
ENSLBEG00000010239	sfswap	71	60.383	ENSMICG00000004465	SFSWAP	70	59.012	Microcebus_murinus
ENSLBEG00000010239	sfswap	60	60.486	ENSMODG00000015581	SFSWAP	68	52.361	Monodelphis_domestica
ENSLBEG00000010239	sfswap	78	80.171	ENSMALG00000012603	sfswap	79	79.291	Monopterus_albus
ENSLBEG00000010239	sfswap	74	58.006	ENSMPUG00000002218	SFSWAP	75	57.781	Mustela_putorius_furo
ENSLBEG00000010239	sfswap	74	57.143	ENSMLUG00000011296	SFSWAP	77	59.916	Myotis_lucifugus
ENSLBEG00000010239	sfswap	77	57.026	ENSNGAG00000018167	Sfswap	73	56.250	Nannospalax_galili
ENSLBEG00000010239	sfswap	71	79.037	ENSNBRG00000020857	sfswap	71	78.882	Neolamprologus_brichardi
ENSLBEG00000010239	sfswap	72	59.624	ENSNLEG00000008386	SFSWAP	72	60.888	Nomascus_leucogenys
ENSLBEG00000010239	sfswap	50	64.908	ENSOPRG00000006983	-	58	59.557	Ochotona_princeps
ENSLBEG00000010239	sfswap	78	78.017	ENSONIG00000003757	sfswap	71	78.161	Oreochromis_niloticus
ENSLBEG00000010239	sfswap	78	77.247	ENSORLG00000010983	sfswap	75	77.528	Oryzias_latipes
ENSLBEG00000010239	sfswap	78	77.669	ENSORLG00020010779	sfswap	75	77.669	Oryzias_latipes_hni
ENSLBEG00000010239	sfswap	78	77.840	ENSORLG00015023093	sfswap	75	77.700	Oryzias_latipes_hsok
ENSLBEG00000010239	sfswap	78	78.672	ENSOMEG00000022065	sfswap	74	78.249	Oryzias_melastigma
ENSLBEG00000010239	sfswap	74	58.757	ENSOGAG00000016724	SFSWAP	81	56.606	Otolemur_garnettii
ENSLBEG00000010239	sfswap	74	57.821	ENSOARG00000014314	SFSWAP	73	59.021	Ovis_aries
ENSLBEG00000010239	sfswap	72	60.058	ENSPPAG00000036706	SFSWAP	75	56.906	Pan_paniscus
ENSLBEG00000010239	sfswap	71	58.636	ENSPPRG00000017318	SFSWAP	67	58.686	Panthera_pardus
ENSLBEG00000010239	sfswap	71	54.985	ENSPTIG00000004304	SFSWAP	69	64.420	Panthera_tigris_altaica
ENSLBEG00000010239	sfswap	72	60.058	ENSPTRG00000005640	SFSWAP	74	57.992	Pan_troglodytes
ENSLBEG00000010239	sfswap	72	60.058	ENSPANG00000019737	SFSWAP	73	56.906	Papio_anubis
ENSLBEG00000010239	sfswap	74	65.652	ENSPKIG00000008327	sfswap	75	63.812	Paramormyrops_kingsleyae
ENSLBEG00000010239	sfswap	71	59.765	ENSPEMG00000001237	Sfswap	70	58.261	Peromyscus_maniculatus_bairdii
ENSLBEG00000010239	sfswap	51	53.448	ENSPMAG00000008279	sfswap	99	54.095	Petromyzon_marinus
ENSLBEG00000010239	sfswap	60	66.967	ENSPCIG00000006062	SFSWAP	70	55.712	Phascolarctos_cinereus
ENSLBEG00000010239	sfswap	78	78.551	ENSPFOG00000019657	sfswap	77	77.762	Poecilia_formosa
ENSLBEG00000010239	sfswap	78	78.693	ENSPLAG00000008513	sfswap	77	77.901	Poecilia_latipinna
ENSLBEG00000010239	sfswap	78	78.551	ENSPMEG00000008716	sfswap	77	77.762	Poecilia_mexicana
ENSLBEG00000010239	sfswap	78	77.983	ENSPREG00000006692	sfswap	77	77.210	Poecilia_reticulata
ENSLBEG00000010239	sfswap	76	57.687	ENSPPYG00000005129	SFSWAP	74	56.906	Pongo_abelii
ENSLBEG00000010239	sfswap	54	60.243	ENSPCAG00000004977	-	57	57.957	Procavia_capensis
ENSLBEG00000010239	sfswap	74	58.616	ENSPCOG00000023786	SFSWAP	73	59.944	Propithecus_coquereli
ENSLBEG00000010239	sfswap	63	71.795	ENSPVAG00000014918	SFSWAP	58	71.795	Pteropus_vampyrus
ENSLBEG00000010239	sfswap	78	80.342	ENSPNYG00000012660	sfswap	71	80.057	Pundamilia_nyererei
ENSLBEG00000010239	sfswap	78	64.912	ENSPNAG00000007073	sfswap	75	65.625	Pygocentrus_nattereri
ENSLBEG00000010239	sfswap	72	57.715	ENSRBIG00000036330	SFSWAP	69	57.833	Rhinopithecus_bieti
ENSLBEG00000010239	sfswap	72	60.203	ENSRROG00000032001	SFSWAP	73	56.906	Rhinopithecus_roxellana
ENSLBEG00000010239	sfswap	74	58.192	ENSSBOG00000026217	SFSWAP	73	57.302	Saimiri_boliviensis_boliviensis
ENSLBEG00000010239	sfswap	68	56.561	ENSSHAG00000014232	SFSWAP	75	57.059	Sarcophilus_harrisii
ENSLBEG00000010239	sfswap	70	66.565	ENSSFOG00015000766	sfswap	69	66.971	Scleropages_formosus
ENSLBEG00000010239	sfswap	78	81.445	ENSSMAG00000018718	sfswap	73	81.728	Scophthalmus_maximus
ENSLBEG00000010239	sfswap	78	83.761	ENSSDUG00000021680	sfswap	72	84.046	Seriola_dumerili
ENSLBEG00000010239	sfswap	78	83.476	ENSSLDG00000010835	sfswap	71	83.333	Seriola_lalandi_dorsalis
ENSLBEG00000010239	sfswap	68	59.877	ENSSARG00000000424	SFSWAP	73	60.123	Sorex_araneus
ENSLBEG00000010239	sfswap	61	57.699	ENSSPUG00000010272	SFSWAP	69	56.826	Sphenodon_punctatus
ENSLBEG00000010239	sfswap	77	82.219	ENSSPAG00000014310	sfswap	74	81.792	Stegastes_partitus
ENSLBEG00000010239	sfswap	74	59.520	ENSSSCG00000009744	SFSWAP	73	56.690	Sus_scrofa
ENSLBEG00000010239	sfswap	72	59.684	ENSTGUG00000004623	SFSWAP	73	59.348	Taeniopygia_guttata
ENSLBEG00000010239	sfswap	64	64.267	ENSTTRG00000013478	SFSWAP	72	53.015	Tursiops_truncatus
ENSLBEG00000010239	sfswap	76	57.453	ENSUAMG00000016807	SFSWAP	75	56.088	Ursus_americanus
ENSLBEG00000010239	sfswap	72	66.011	ENSUMAG00000002957	SFSWAP	77	54.993	Ursus_maritimus
ENSLBEG00000010239	sfswap	76	56.199	ENSVVUG00000010753	SFSWAP	75	56.892	Vulpes_vulpes
ENSLBEG00000010239	sfswap	76	55.270	ENSXETG00000009350	sfswap	94	56.224	Xenopus_tropicalis
ENSLBEG00000010239	sfswap	78	78.663	ENSXMAG00000009020	sfswap	75	79.801	Xiphophorus_maculatus