EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000010408 (Gene tree)
Gene ID
109997580
Gene Symbol
-
Alias
RAB5CL|RABL
Full Name
ras-related protein Rab-5C-like
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Plus strand
Length
5711 bases
Position
chrFKLU01000426.1:405480-411190
Accession
109997580
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000013492MMR_HSR1PF01926.230.0001611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000014217-2448XM_020652113ENSLBEP00000013492220 (aa)XP_020507769UPI0009B3A038
Gene Model
Click here to download ENSLBEG00000010408's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010408's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000010408-7333.125ENSLBEG00000013176rab237435.526
ENSLBEG00000010408-8035.227ENSLBEG00000003644rabl27735.227
ENSLBEG00000010408-8842.857ENSLBEG00000021040rab1ba8147.239
ENSLBEG00000010408-8948.718ENSLBEG00000003235rab22a9848.718
ENSLBEG00000010408-9684.360ENSLBEG00000002516rab5aa9384.360
ENSLBEG00000010408-7744.253ENSLBEG00000002367rab25a7846.061
ENSLBEG00000010408-6936.709ENSLBEG00000006152-7936.709
ENSLBEG00000010408-7537.349ENSLBEG00000001313RAB39B7837.349
ENSLBEG00000010408-7148.408ENSLBEG00000016417rab11al7548.408
ENSLBEG00000010408-7536.145ENSLBEG00000022630-7736.585
ENSLBEG00000010408-7447.239ENSLBEG00000015248rab11bb7547.239
ENSLBEG00000010408-9538.942ENSLBEG00000008746RAB419938.942
ENSLBEG00000010408-7532.530ENSLBEG00000028450kras8832.143
ENSLBEG00000010408-7830.814ENSLBEG00000019137rhebl18530.303
ENSLBEG00000010408-8838.235ENSLBEG00000003101rab4a9538.235
ENSLBEG00000010408-7335.976ENSLBEG00000018180si:dkey-13a21.48035.976
ENSLBEG00000010408-8045.455ENSLBEG00000016446rab25b7846.626
ENSLBEG00000010408-9041.346ENSLBEG00000027691RAB178840.580
ENSLBEG00000010408-7446.626ENSLBEG00000004172-7447.205
ENSLBEG00000010408-6637.748ENSLBEG00000018063-6337.748
ENSLBEG00000010408-8844.388ENSLBEG00000028426RAB1A8147.239
ENSLBEG00000010408-7133.125ENSLBEG00000027819rab34b6333.125
ENSLBEG00000010408-10091.403ENSLBEG00000004128rab5c10091.403
ENSLBEG00000010408-9040.909ENSLBEG00000026790-9240.909
ENSLBEG00000010408-8542.553ENSLBEG00000005791-7644.172
ENSLBEG00000010408-8837.879ENSLBEG00000017798-9537.879
ENSLBEG00000010408-8941.026ENSLBEG00000001146rab308044.785
ENSLBEG00000010408-6936.709ENSLBEG00000018812RAB298236.709
ENSLBEG00000010408-7436.145ENSLBEG00000002926si:dkey-34d22.57536.145
ENSLBEG00000010408-7544.242ENSLBEG00000005861rab18a7744.242
ENSLBEG00000010408-8031.250ENSLBEG00000014885rheb8930.909
ENSLBEG00000010408-7334.911ENSLBEG00000011478rab9b7634.911
ENSLBEG00000010408-7344.099ENSLBEG00000005981-7244.099
ENSLBEG00000010408-8843.878ENSLBEG00000027781rab1ab8047.239
ENSLBEG00000010408-9233.816ENSLBEG00000005128-9132.850
ENSLBEG00000010408-7436.585ENSLBEG00000001193rab42a7636.585
ENSLBEG00000010408-8640.741ENSLBEG00000019435rab148740.741
ENSLBEG00000010408-8838.342ENSLBEG00000026779rab138142.236
ENSLBEG00000010408-8137.500ENSLBEG00000026777rab33ba8237.500
ENSLBEG00000010408-7339.752ENSLBEG00000013463rab157639.752
ENSLBEG00000010408-7339.157ENSLBEG00000025798zgc:1015597139.157
ENSLBEG00000010408-5430.081ENSLBEG00000022310arl8ba5330.081
ENSLBEG00000010408-8840.722ENSLBEG00000003748rab6a8243.860
ENSLBEG00000010408-9339.512ENSLBEG00000026930rab6ba8343.605
ENSLBEG00000010408-7338.554ENSLBEG00000014427rab33a7438.554
ENSLBEG00000010408-7431.902ENSLBEG00000001905hrasb8731.325
ENSLBEG00000010408-8837.879ENSLBEG00000001796RAB7A9537.879
ENSLBEG00000010408-8738.860ENSLBEG00000027539-8738.860
ENSLBEG00000010408-9239.024ENSLBEG00000019372rab6bb9939.024
ENSLBEG00000010408-7242.138ENSLBEG00000001618rab35b7942.138
ENSLBEG00000010408-8839.801ENSLBEG00000026857rab11a7547.205
ENSLBEG00000010408-7641.667ENSLBEG00000020796rab2a8043.421
ENSLBEG00000010408-8542.553ENSLBEG00000027226-6944.172
ENSLBEG00000010408-7437.500ENSLBEG00000013756rab128237.374
ENSLBEG00000010408-7545.455ENSLBEG00000019428rab18b8045.455
ENSLBEG00000010408-7640.719ENSLBEG00000007681si:dkey-16l2.168141.765
ENSLBEG00000010408-8940.488ENSLBEG00000006087rab11ba7446.584
ENSLBEG00000010408-8831.100ENSLBEG00000005018rab32b9430.435
ENSLBEG00000010408-9032.850ENSLBEG00000020582rab9a9932.850
ENSLBEG00000010408-7039.216ENSLBEG00000026989RAB157239.216
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000010408-9987.615ENSG00000108774RAB5C10094.400Homo_sapiens
ENSLBEG00000010408-10091.403ENSAPOG00000016864rab5c10091.403Acanthochromis_polyacanthus
ENSLBEG00000010408-9987.615ENSAMEG00000006003RAB5C10087.615Ailuropoda_melanoleuca
ENSLBEG00000010408-10090.045ENSACIG00000010896rab5c10090.045Amphilophus_citrinellus
ENSLBEG00000010408-10091.403ENSAOCG00000016614rab5c10091.403Amphiprion_ocellaris
ENSLBEG00000010408-9990.826ENSAPEG00000017868-10090.826Amphiprion_percula
ENSLBEG00000010408-9892.166ENSATEG00000001937rab5c10091.324Anabas_testudineus
ENSLBEG00000010408-9489.806ENSANAG00000025390RAB5C10089.806Aotus_nancymaae
ENSLBEG00000010408-10088.688ENSACLG00000002706rab5c10088.688Astatotilapia_calliptera
ENSLBEG00000010408-9591.943ENSACLG00000008615-10090.991Astatotilapia_calliptera
ENSLBEG00000010408-10091.441ENSAMXG00000043717rab5c10091.441Astyanax_mexicanus
ENSLBEG00000010408-9490.385ENSAMXG00000037267-9990.385Astyanax_mexicanus
ENSLBEG00000010408-9987.615ENSBTAG00000006982RAB5C10087.615Bos_taurus
ENSLBEG00000010408-9875.463WBGene00004268rab-59975.115Caenorhabditis_elegans
ENSLBEG00000010408-9987.615ENSCAFG00000015629RAB5C10087.615Canis_familiaris
ENSLBEG00000010408-9987.615ENSCAFG00020013537RAB5C10087.615Canis_lupus_dingo
ENSLBEG00000010408-9987.615ENSCHIG00000012960RAB5C10087.615Capra_hircus
ENSLBEG00000010408-9988.073ENSTSYG00000030531RAB5C10088.073Carlito_syrichta
ENSLBEG00000010408-9987.615ENSCCAG00000025940RAB5C10087.615Cebus_capucinus
ENSLBEG00000010408-9987.615ENSCATG00000040873RAB5C10087.615Cercocebus_atys
ENSLBEG00000010408-9987.156ENSCLAG00000016650RAB5C10087.156Chinchilla_lanigera
ENSLBEG00000010408-8192.737ENSCHOG00000009886RAB5C10092.737Choloepus_hoffmanni
ENSLBEG00000010408-9674.766ENSCING00000003340-9774.299Ciona_intestinalis
ENSLBEG00000010408-9973.684ENSCSAVG00000000613-9980.982Ciona_savignyi
ENSLBEG00000010408-9987.615ENSCGRG00001014226Rab5c10087.615Cricetulus_griseus_chok1gshd
ENSLBEG00000010408-9987.615ENSCGRG00000007534Rab5c10087.615Cricetulus_griseus_crigri
ENSLBEG00000010408-10090.045ENSCSEG00000017024rab5c10090.045Cynoglossus_semilaevis
ENSLBEG00000010408-10091.403ENSCVAG00000009550rab5c10091.403Cyprinodon_variegatus
ENSLBEG00000010408-9987.615ENSDNOG00000038853RAB5C10087.615Dasypus_novemcinctus
ENSLBEG00000010408-9988.532ENSDORG00000006819Rab5c10088.532Dipodomys_ordii
ENSLBEG00000010408-9673.113FBgn0014010Rab58380.769Drosophila_melanogaster
ENSLBEG00000010408-9675.943ENSEBUG00000014794rab5c8686.813Eptatretus_burgeri
ENSLBEG00000010408-9987.615ENSEASG00005009281RAB5C10087.615Equus_asinus_asinus
ENSLBEG00000010408-9988.073ENSECAG00000025054RAB5C10088.073Equus_caballus
ENSLBEG00000010408-9987.615ENSEEUG00000002790RAB5C10087.615Erinaceus_europaeus
ENSLBEG00000010408-9891.244ENSELUG00000018516rab5c9991.244Esox_lucius
ENSLBEG00000010408-10088.235ENSELUG00000010439-10088.235Esox_lucius
ENSLBEG00000010408-9987.615ENSFCAG00000002148RAB5C10087.615Felis_catus
ENSLBEG00000010408-9986.697ENSFDAG00000021541RAB5C10086.697Fukomys_damarensis
ENSLBEG00000010408-10090.950ENSFHEG00000012117rab5c10090.950Fundulus_heteroclitus
ENSLBEG00000010408-10093.182ENSFHEG00000015268-10093.182Fundulus_heteroclitus
ENSLBEG00000010408-10089.593ENSGMOG00000015096rab5c10089.593Gadus_morhua
ENSLBEG00000010408-7787.574ENSGMOG00000001876-9887.574Gadus_morhua
ENSLBEG00000010408-9594.737ENSGAFG00000003642-9991.818Gambusia_affinis
ENSLBEG00000010408-10090.045ENSGAFG00000000884rab5c10090.045Gambusia_affinis
ENSLBEG00000010408-10086.878ENSGACG00000008659rab5c10086.878Gasterosteus_aculeatus
ENSLBEG00000010408-9987.615ENSGGOG00000005472RAB5C10087.615Gorilla_gorilla
ENSLBEG00000010408-9591.943ENSHBUG00000006823-10090.991Haplochromis_burtoni
ENSLBEG00000010408-10088.688ENSHBUG00000002014rab5c10088.688Haplochromis_burtoni
ENSLBEG00000010408-9986.697ENSHGLG00000012067RAB5C10086.697Heterocephalus_glaber_female
ENSLBEG00000010408-10091.855ENSHCOG00000004662rab5c9891.855Hippocampus_comes
ENSLBEG00000010408-9683.962ENSHCOG00000020238-9984.862Hippocampus_comes
ENSLBEG00000010408-9689.151ENSIPUG00000020082rab5c10090.583Ictalurus_punctatus
ENSLBEG00000010408-9987.615ENSSTOG00000006620RAB5C10087.615Ictidomys_tridecemlineatus
ENSLBEG00000010408-9988.073ENSJJAG00000021181Rab5c10088.073Jaculus_jaculus
ENSLBEG00000010408-10093.636ENSKMAG00000017417-10093.636Kryptolebias_marmoratus
ENSLBEG00000010408-10090.950ENSKMAG00000020038rab5c10090.950Kryptolebias_marmoratus
ENSLBEG00000010408-9889.352ENSLOCG00000012566rab5c10089.352Lepisosteus_oculatus
ENSLBEG00000010408-9987.615ENSMFAG00000039627RAB5C10087.615Macaca_fascicularis
ENSLBEG00000010408-9987.615ENSMNEG00000000355RAB5C10087.615Macaca_nemestrina
ENSLBEG00000010408-10095.000ENSMAMG00000016207-10095.000Mastacembelus_armatus
ENSLBEG00000010408-10090.045ENSMAMG00000022322rab5c10090.045Mastacembelus_armatus
ENSLBEG00000010408-9591.943ENSMZEG00005021090-10090.991Maylandia_zebra
ENSLBEG00000010408-10088.688ENSMZEG00005022735rab5c10088.688Maylandia_zebra
ENSLBEG00000010408-9988.073ENSMAUG00000015005Rab5c10088.073Mesocricetus_auratus
ENSLBEG00000010408-9988.073ENSMICG00000041608RAB5C10088.073Microcebus_murinus
ENSLBEG00000010408-9988.073ENSMOCG00000018531-10088.073Microtus_ochrogaster
ENSLBEG00000010408-10090.950ENSMMOG00000020621rab5c10090.950Mola_mola
ENSLBEG00000010408-10093.182ENSMALG00000022348-10093.182Monopterus_albus
ENSLBEG00000010408-9784.651ENSMALG00000006052rab5c10083.111Monopterus_albus
ENSLBEG00000010408-9988.532MGP_CAROLIEiJ_G0017184Rab5c10088.532Mus_caroli
ENSLBEG00000010408-9988.532ENSMUSG00000019173Rab5c10088.532Mus_musculus
ENSLBEG00000010408-9988.532MGP_PahariEiJ_G0018314Rab5c10088.532Mus_pahari
ENSLBEG00000010408-9988.532MGP_SPRETEiJ_G0018027Rab5c10088.532Mus_spretus
ENSLBEG00000010408-9987.615ENSMPUG00000010554RAB5C10087.615Mustela_putorius_furo
ENSLBEG00000010408-9987.615ENSNGAG00000010286Rab5c10087.615Nannospalax_galili
ENSLBEG00000010408-10089.593ENSNBRG00000018165rab5c10089.593Neolamprologus_brichardi
ENSLBEG00000010408-9591.943ENSNBRG00000016922-10090.991Neolamprologus_brichardi
ENSLBEG00000010408-8186.592ENSOPRG00000008255RAB5C10086.592Ochotona_princeps
ENSLBEG00000010408-9986.697ENSODEG00000017920RAB5C10086.697Octodon_degus
ENSLBEG00000010408-10090.498ENSONIG00000001113rab5c10090.498Oreochromis_niloticus
ENSLBEG00000010408-9890.783ENSORLG00000003882rab5c10089.954Oryzias_latipes
ENSLBEG00000010408-9890.783ENSORLG00020008388rab5c10089.954Oryzias_latipes_hni
ENSLBEG00000010408-9890.783ENSORLG00015021900rab5c10089.954Oryzias_latipes_hsok
ENSLBEG00000010408-9890.783ENSOMEG00000023078rab5c10089.954Oryzias_melastigma
ENSLBEG00000010408-9988.073ENSOGAG00000009456RAB5C10088.073Otolemur_garnettii
ENSLBEG00000010408-9987.615ENSOARG00000018768RAB5C10087.615Ovis_aries
ENSLBEG00000010408-9987.615ENSPPAG00000037206RAB5C10087.615Pan_paniscus
ENSLBEG00000010408-9987.615ENSPPRG00000005745RAB5C10087.615Panthera_pardus
ENSLBEG00000010408-9987.615ENSPTIG00000008177RAB5C10087.615Panthera_tigris_altaica
ENSLBEG00000010408-9987.615ENSPTRG00000009194RAB5C10087.615Pan_troglodytes
ENSLBEG00000010408-9886.636ENSPKIG00000001237-9986.636Paramormyrops_kingsleyae
ENSLBEG00000010408-9884.332ENSPKIG00000020112-9984.332Paramormyrops_kingsleyae
ENSLBEG00000010408-9790.698ENSPMGG00000010792rab5c9990.698Periophthalmus_magnuspinnatus
ENSLBEG00000010408-9988.073ENSPEMG00000017971Rab5c10088.073Peromyscus_maniculatus_bairdii
ENSLBEG00000010408-9975.576ENSPMAG00000007867rab5c10075.576Petromyzon_marinus
ENSLBEG00000010408-9974.439ENSPMAG00000000008rab5c8782.292Petromyzon_marinus
ENSLBEG00000010408-9977.880ENSPMAG00000001399rab5c10077.880Petromyzon_marinus
ENSLBEG00000010408-9987.615ENSPCIG00000020225-10087.615Phascolarctos_cinereus
ENSLBEG00000010408-9994.470ENSPLAG00000016333-9994.470Poecilia_latipinna
ENSLBEG00000010408-10090.045ENSPLAG00000004790rab5c10090.045Poecilia_latipinna
ENSLBEG00000010408-10090.045ENSPMEG00000011336rab5c10090.045Poecilia_mexicana
ENSLBEG00000010408-9794.836ENSPMEG00000012614-10091.928Poecilia_mexicana
ENSLBEG00000010408-8694.709ENSPREG00000022167-8996.175Poecilia_reticulata
ENSLBEG00000010408-10090.045ENSPREG00000010146rab5c10090.045Poecilia_reticulata
ENSLBEG00000010408-9987.615ENSPPYG00000008398RAB5C10087.615Pongo_abelii
ENSLBEG00000010408-9986.697ENSPCAG00000016412RAB5C10086.697Procavia_capensis
ENSLBEG00000010408-9987.615ENSPCOG00000026327RAB5C10087.615Propithecus_coquereli
ENSLBEG00000010408-9988.073ENSPVAG00000003867RAB5C10088.073Pteropus_vampyrus
ENSLBEG00000010408-10088.688ENSPNYG00000010615rab5c10088.688Pundamilia_nyererei
ENSLBEG00000010408-9591.943ENSPNYG00000015851-10090.991Pundamilia_nyererei
ENSLBEG00000010408-10090.991ENSPNAG00000028138rab5c10090.991Pygocentrus_nattereri
ENSLBEG00000010408-9489.423ENSPNAG00000002218-9988.571Pygocentrus_nattereri
ENSLBEG00000010408-9988.073ENSRNOG00000018568Rab5c10088.073Rattus_norvegicus
ENSLBEG00000010408-9987.615ENSRBIG00000031376RAB5C10087.615Rhinopithecus_bieti
ENSLBEG00000010408-9987.615ENSRROG00000032895RAB5C10087.615Rhinopithecus_roxellana
ENSLBEG00000010408-9987.615ENSSBOG00000032552-10087.615Saimiri_boliviensis_boliviensis
ENSLBEG00000010408-9988.073ENSSHAG00000005267-10088.073Sarcophilus_harrisii
ENSLBEG00000010408-10084.163ENSSFOG00015009988-10084.163Scleropages_formosus
ENSLBEG00000010408-9591.429ENSSMAG00000007323rab5c10089.593Scophthalmus_maximus
ENSLBEG00000010408-10090.045ENSSDUG00000023008rab5c10090.045Seriola_dumerili
ENSLBEG00000010408-10089.140ENSSLDG00000017771rab5c10089.140Seriola_lalandi_dorsalis
ENSLBEG00000010408-9988.073ENSSPUG00000012950-10088.073Sphenodon_punctatus
ENSLBEG00000010408-10090.950ENSSPAG00000006436rab5c10090.950Stegastes_partitus
ENSLBEG00000010408-9987.615ENSSSCG00000032467RAB5C10087.615Sus_scrofa
ENSLBEG00000010408-10090.950ENSTRUG00000015590rab5c10090.950Takifugu_rubripes
ENSLBEG00000010408-9989.401ENSTNIG00000011711rab5c9889.401Tetraodon_nigroviridis
ENSLBEG00000010408-9987.615ENSTBEG00000007092RAB5C10087.615Tupaia_belangeri
ENSLBEG00000010408-9987.156ENSTTRG00000006673RAB5C10087.156Tursiops_truncatus
ENSLBEG00000010408-9987.615ENSUAMG00000024343RAB5C10087.615Ursus_americanus
ENSLBEG00000010408-9987.615ENSUMAG00000023270RAB5C10087.615Ursus_maritimus
ENSLBEG00000010408-10090.498ENSXCOG00000016788rab5c10090.498Xiphophorus_couchianus
ENSLBEG00000010408-9595.215ENSXCOG00000006300-9991.441Xiphophorus_couchianus
ENSLBEG00000010408-9993.607ENSXMAG00000022179-10093.607Xiphophorus_maculatus
ENSLBEG00000010408-10090.045ENSXMAG00000003266rab5c10090.045Xiphophorus_maculatus

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