EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000010627 (Gene tree)
Gene ID: 110004948
Gene Symbol: -
Alias: -
Full Name: rab-like protein 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9891 bases
Position: chrFKLU01001860.1:21-9911
Accession: 110004948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000013773	MMR_HSR1	PF01926.23	3.2e-05	1	1
ENSLBEP00000013756	MMR_HSR1	PF01926.23	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000014534	-	663	-	ENSLBEP00000013773	220 (aa)	-	-
ENSLBET00000014516	-	3043	XM_020660430	ENSLBEP00000013756	234 (aa)	XP_020516086	-

Gene Model

Click here to download ENSLBEG00000010627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000010627	-	56	31.298	ENSLBEG00000001313	RAB39B	58	31.298
ENSLBEG00000010627	-	53	30.159	ENSLBEG00000014427	rab33a	52	30.159
ENSLBEG00000010627	-	50	30.631	ENSLBEG00000003369	-	84	30.631
ENSLBEG00000010627	-	56	31.298	ENSLBEG00000022630	-	58	31.298
ENSLBEG00000010627	-	100	100.000	ENSLBEG00000020595	rabl3	100	100.000
ENSLBEG00000010627	-	54	32.308	ENSLBEG00000002926	si:dkey-34d22.5	55	32.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000010627	-	100	85.654	ENSG00000144840	RABL3	100	92.248	Homo_sapiens
ENSLBEG00000010627	-	100	97.863	ENSAPOG00000024479	rabl3	100	97.863	Acanthochromis_polyacanthus
ENSLBEG00000010627	-	100	86.498	ENSAMEG00000004809	RABL3	100	86.498	Ailuropoda_melanoleuca
ENSLBEG00000010627	-	100	93.860	ENSACIG00000014343	rabl3	100	93.860	Amphilophus_citrinellus
ENSLBEG00000010627	-	100	97.863	ENSAOCG00000011851	rabl3	100	97.863	Amphiprion_ocellaris
ENSLBEG00000010627	-	100	97.863	ENSAPEG00000011214	rabl3	100	97.863	Amphiprion_percula
ENSLBEG00000010627	-	100	97.436	ENSATEG00000003503	rabl3	100	97.436	Anabas_testudineus
ENSLBEG00000010627	-	100	80.169	ENSACAG00000011313	-	100	80.169	Anolis_carolinensis
ENSLBEG00000010627	-	100	87.764	ENSANAG00000027278	RABL3	100	87.764	Aotus_nancymaae
ENSLBEG00000010627	-	100	97.009	ENSACLG00000009820	rabl3	100	97.009	Astatotilapia_calliptera
ENSLBEG00000010627	-	100	93.162	ENSAMXG00000038716	rabl3	100	93.162	Astyanax_mexicanus
ENSLBEG00000010627	-	100	87.342	ENSBTAG00000015898	RABL3	100	87.342	Bos_taurus
ENSLBEG00000010627	-	100	87.764	ENSCJAG00000008611	RABL3	100	87.764	Callithrix_jacchus
ENSLBEG00000010627	-	100	87.342	ENSCAFG00000011292	RABL3	89	87.342	Canis_familiaris
ENSLBEG00000010627	-	100	87.342	ENSCAFG00020006397	RABL3	100	87.342	Canis_lupus_dingo
ENSLBEG00000010627	-	100	87.342	ENSCHIG00000017365	RABL3	100	87.342	Capra_hircus
ENSLBEG00000010627	-	100	86.076	ENSCPOG00000009645	RABL3	100	86.076	Cavia_porcellus
ENSLBEG00000010627	-	100	86.076	ENSCATG00000032561	RABL3	100	86.076	Cercocebus_atys
ENSLBEG00000010627	-	100	85.654	ENSCLAG00000010855	RABL3	100	85.654	Chinchilla_lanigera
ENSLBEG00000010627	-	99	85.897	ENSCSAG00000007155	RABL3	100	85.897	Chlorocebus_sabaeus
ENSLBEG00000010627	-	100	86.920	ENSCPBG00000001999	RABL3	100	86.920	Chrysemys_picta_bellii
ENSLBEG00000010627	-	100	86.076	ENSCANG00000031684	RABL3	100	86.076	Colobus_angolensis_palliatus
ENSLBEG00000010627	-	100	83.544	ENSCGRG00001021537	Rabl3	100	83.544	Cricetulus_griseus_chok1gshd
ENSLBEG00000010627	-	100	83.544	ENSCGRG00000002114	Rabl3	100	83.544	Cricetulus_griseus_crigri
ENSLBEG00000010627	-	100	86.425	ENSCSEG00000014982	rabl3	100	86.425	Cynoglossus_semilaevis
ENSLBEG00000010627	-	100	83.636	ENSCVAG00000009904	rabl3	100	83.636	Cyprinodon_variegatus
ENSLBEG00000010627	-	100	92.735	ENSDARG00000040959	rabl3	100	92.735	Danio_rerio
ENSLBEG00000010627	-	100	85.232	ENSDNOG00000008174	RABL3	100	85.232	Dasypus_novemcinctus
ENSLBEG00000010627	-	100	85.654	ENSETEG00000010206	RABL3	100	85.654	Echinops_telfairi
ENSLBEG00000010627	-	100	87.764	ENSECAG00000023059	RABL3	100	87.764	Equus_caballus
ENSLBEG00000010627	-	100	81.857	ENSEEUG00000002897	RABL3	100	81.857	Erinaceus_europaeus
ENSLBEG00000010627	-	100	94.017	ENSELUG00000014758	rabl3	100	94.017	Esox_lucius
ENSLBEG00000010627	-	100	86.920	ENSFCAG00000031879	RABL3	100	78.924	Felis_catus
ENSLBEG00000010627	-	100	84.810	ENSFALG00000005296	RABL3	100	84.810	Ficedula_albicollis
ENSLBEG00000010627	-	100	86.441	ENSFDAG00000000307	RABL3	100	86.441	Fukomys_damarensis
ENSLBEG00000010627	-	100	92.308	ENSFHEG00000011273	rabl3	100	92.308	Fundulus_heteroclitus
ENSLBEG00000010627	-	100	93.590	ENSGMOG00000007845	rabl3	100	93.590	Gadus_morhua
ENSLBEG00000010627	-	100	86.076	ENSGALG00000014949	RABL3	100	86.076	Gallus_gallus
ENSLBEG00000010627	-	100	91.880	ENSGAFG00000015953	rabl3	100	91.880	Gambusia_affinis
ENSLBEG00000010627	-	100	94.872	ENSGACG00000007387	rabl3	100	96.124	Gasterosteus_aculeatus
ENSLBEG00000010627	-	100	87.342	ENSGAGG00000003677	RABL3	100	87.342	Gopherus_agassizii
ENSLBEG00000010627	-	100	85.654	ENSGGOG00000006059	RABL3	100	85.654	Gorilla_gorilla
ENSLBEG00000010627	-	100	97.436	ENSHBUG00000019478	rabl3	93	97.436	Haplochromis_burtoni
ENSLBEG00000010627	-	100	86.441	ENSHGLG00000014491	RABL3	100	86.441	Heterocephalus_glaber_female
ENSLBEG00000010627	-	100	86.441	ENSHGLG00100004866	RABL3	100	86.441	Heterocephalus_glaber_male
ENSLBEG00000010627	-	100	86.818	ENSHCOG00000019245	rabl3	100	86.818	Hippocampus_comes
ENSLBEG00000010627	-	100	91.880	ENSIPUG00000012657	rabl3	100	91.880	Ictalurus_punctatus
ENSLBEG00000010627	-	100	85.654	ENSSTOG00000019452	RABL3	100	85.654	Ictidomys_tridecemlineatus
ENSLBEG00000010627	-	100	78.475	ENSJJAG00000023553	Rabl3	100	78.475	Jaculus_jaculus
ENSLBEG00000010627	-	100	90.171	ENSKMAG00000015464	rabl3	100	90.171	Kryptolebias_marmoratus
ENSLBEG00000010627	-	100	88.186	ENSLOCG00000006265	rabl3	100	88.186	Lepisosteus_oculatus
ENSLBEG00000010627	-	100	86.920	ENSLAFG00000003711	RABL3	100	86.920	Loxodonta_africana
ENSLBEG00000010627	-	100	86.076	ENSMFAG00000031923	RABL3	100	86.076	Macaca_fascicularis
ENSLBEG00000010627	-	100	78.027	ENSMMUG00000001594	RABL3	100	78.027	Macaca_mulatta
ENSLBEG00000010627	-	100	86.076	ENSMNEG00000043980	RABL3	100	86.076	Macaca_nemestrina
ENSLBEG00000010627	-	100	86.076	ENSMLEG00000028177	RABL3	100	86.076	Mandrillus_leucophaeus
ENSLBEG00000010627	-	100	96.581	ENSMAMG00000015155	rabl3	100	96.581	Mastacembelus_armatus
ENSLBEG00000010627	-	100	97.009	ENSMZEG00005002607	rabl3	100	97.009	Maylandia_zebra
ENSLBEG00000010627	-	100	83.544	ENSMAUG00000013022	Rabl3	100	83.544	Mesocricetus_auratus
ENSLBEG00000010627	-	100	86.920	ENSMICG00000049288	RABL3	100	86.920	Microcebus_murinus
ENSLBEG00000010627	-	100	83.122	ENSMOCG00000015237	Rabl3	100	83.122	Microtus_ochrogaster
ENSLBEG00000010627	-	100	93.421	ENSMMOG00000005628	rabl3	100	93.421	Mola_mola
ENSLBEG00000010627	-	100	86.498	ENSMODG00000018232	RABL3	100	86.498	Monodelphis_domestica
ENSLBEG00000010627	-	100	89.873	ENSMALG00000018837	rabl3	100	89.873	Monopterus_albus
ENSLBEG00000010627	-	100	83.544	MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	Mus_caroli
ENSLBEG00000010627	-	100	83.544	ENSMUSG00000022827	Rabl3	100	91.473	Mus_musculus
ENSLBEG00000010627	-	100	83.122	MGP_PahariEiJ_G0016429	Rabl3	100	91.473	Mus_pahari
ENSLBEG00000010627	-	100	83.544	MGP_SPRETEiJ_G0021628	Rabl3	100	91.473	Mus_spretus
ENSLBEG00000010627	-	100	87.342	ENSMPUG00000008257	RABL3	89	87.342	Mustela_putorius_furo
ENSLBEG00000010627	-	100	86.498	ENSMLUG00000014113	RABL3	100	86.498	Myotis_lucifugus
ENSLBEG00000010627	-	99	79.263	ENSNGAG00000001939	Rabl3	99	79.263	Nannospalax_galili
ENSLBEG00000010627	-	93	96.330	ENSNBRG00000012423	rabl3	92	96.330	Neolamprologus_brichardi
ENSLBEG00000010627	-	100	85.654	ENSNLEG00000031723	RABL3	100	85.654	Nomascus_leucogenys
ENSLBEG00000010627	-	100	84.810	ENSMEUG00000006606	RABL3	100	84.810	Notamacropus_eugenii
ENSLBEG00000010627	-	100	85.654	ENSODEG00000004758	-	100	85.654	Octodon_degus
ENSLBEG00000010627	-	100	97.436	ENSONIG00000004281	rabl3	100	97.436	Oreochromis_niloticus
ENSLBEG00000010627	-	99	84.681	ENSOANG00000003928	RABL3	99	84.681	Ornithorhynchus_anatinus
ENSLBEG00000010627	-	100	94.017	ENSORLG00000020457	rabl3	100	94.017	Oryzias_latipes
ENSLBEG00000010627	-	100	94.017	ENSORLG00020008991	rabl3	100	93.694	Oryzias_latipes_hni
ENSLBEG00000010627	-	100	94.017	ENSORLG00015005649	rabl3	88	94.017	Oryzias_latipes_hsok
ENSLBEG00000010627	-	100	95.299	ENSOMEG00000015066	rabl3	100	95.299	Oryzias_melastigma
ENSLBEG00000010627	-	100	86.076	ENSOGAG00000005961	RABL3	100	86.076	Otolemur_garnettii
ENSLBEG00000010627	-	100	87.342	ENSOARG00000019939	RABL3	100	87.342	Ovis_aries
ENSLBEG00000010627	-	94	84.305	ENSPPAG00000036997	RABL3	87	84.305	Pan_paniscus
ENSLBEG00000010627	-	100	87.342	ENSPPRG00000016325	RABL3	100	87.342	Panthera_pardus
ENSLBEG00000010627	-	100	87.342	ENSPTIG00000018021	RABL3	100	87.342	Panthera_tigris_altaica
ENSLBEG00000010627	-	100	85.654	ENSPTRG00000015272	RABL3	100	85.654	Pan_troglodytes
ENSLBEG00000010627	-	100	86.076	ENSPANG00000001339	RABL3	100	86.076	Papio_anubis
ENSLBEG00000010627	-	100	92.735	ENSPKIG00000007818	rabl3	100	92.735	Paramormyrops_kingsleyae
ENSLBEG00000010627	-	100	86.498	ENSPSIG00000011358	RABL3	100	86.498	Pelodiscus_sinensis
ENSLBEG00000010627	-	100	95.023	ENSPMGG00000015794	rabl3	100	95.023	Periophthalmus_magnuspinnatus
ENSLBEG00000010627	-	100	83.544	ENSPEMG00000016913	Rabl3	100	83.544	Peromyscus_maniculatus_bairdii
ENSLBEG00000010627	-	100	85.654	ENSPCIG00000018922	RABL3	100	85.654	Phascolarctos_cinereus
ENSLBEG00000010627	-	100	93.590	ENSPFOG00000008586	rabl3	100	93.590	Poecilia_formosa
ENSLBEG00000010627	-	100	93.590	ENSPLAG00000014482	rabl3	100	93.590	Poecilia_latipinna
ENSLBEG00000010627	-	100	93.590	ENSPMEG00000002295	rabl3	100	93.590	Poecilia_mexicana
ENSLBEG00000010627	-	100	93.590	ENSPREG00000014815	rabl3	100	93.590	Poecilia_reticulata
ENSLBEG00000010627	-	100	86.076	ENSPPYG00000013501	RABL3	100	86.076	Pongo_abelii
ENSLBEG00000010627	-	100	87.342	ENSPCOG00000022230	RABL3	100	87.342	Propithecus_coquereli
ENSLBEG00000010627	-	100	85.654	ENSPVAG00000010013	RABL3	100	85.654	Pteropus_vampyrus
ENSLBEG00000010627	-	100	97.436	ENSPNYG00000006659	rabl3	100	97.436	Pundamilia_nyererei
ENSLBEG00000010627	-	100	95.726	ENSPNAG00000000748	rabl3	100	95.726	Pygocentrus_nattereri
ENSLBEG00000010627	-	100	83.122	ENSRNOG00000026085	Rabl3	100	83.122	Rattus_norvegicus
ENSLBEG00000010627	-	100	86.076	ENSRBIG00000040941	RABL3	100	86.076	Rhinopithecus_bieti
ENSLBEG00000010627	-	100	86.076	ENSRROG00000043745	RABL3	100	86.076	Rhinopithecus_roxellana
ENSLBEG00000010627	-	100	87.764	ENSSBOG00000004022	RABL3	100	87.764	Saimiri_boliviensis_boliviensis
ENSLBEG00000010627	-	100	84.810	ENSSHAG00000012233	RABL3	100	84.810	Sarcophilus_harrisii
ENSLBEG00000010627	-	100	93.590	ENSSFOG00015010171	rabl3	100	93.590	Scleropages_formosus
ENSLBEG00000010627	-	100	97.436	ENSSMAG00000002403	rabl3	100	97.436	Scophthalmus_maximus
ENSLBEG00000010627	-	100	97.863	ENSSDUG00000012078	rabl3	100	97.863	Seriola_dumerili
ENSLBEG00000010627	-	100	98.291	ENSSLDG00000021899	rabl3	100	98.291	Seriola_lalandi_dorsalis
ENSLBEG00000010627	-	100	86.920	ENSSARG00000008316	RABL3	100	86.920	Sorex_araneus
ENSLBEG00000010627	-	100	86.498	ENSSPUG00000017490	RABL3	100	86.498	Sphenodon_punctatus
ENSLBEG00000010627	-	100	97.436	ENSSPAG00000011642	rabl3	100	97.436	Stegastes_partitus
ENSLBEG00000010627	-	100	87.764	ENSSSCG00000035258	RABL3	100	87.764	Sus_scrofa
ENSLBEG00000010627	-	100	85.232	ENSTGUG00000013374	RABL3	100	85.232	Taeniopygia_guttata
ENSLBEG00000010627	-	99	82.805	ENSTRUG00000007846	RABL3	100	96.875	Takifugu_rubripes
ENSLBEG00000010627	-	100	73.418	ENSTBEG00000005153	RABL3	100	73.418	Tupaia_belangeri
ENSLBEG00000010627	-	100	86.498	ENSUAMG00000005299	RABL3	100	86.498	Ursus_americanus
ENSLBEG00000010627	-	100	86.076	ENSUMAG00000025256	RABL3	89	86.076	Ursus_maritimus
ENSLBEG00000010627	-	100	87.764	ENSVPAG00000003776	RABL3	100	87.764	Vicugna_pacos
ENSLBEG00000010627	-	100	87.342	ENSVVUG00000022300	RABL3	89	87.342	Vulpes_vulpes
ENSLBEG00000010627	-	100	93.162	ENSXMAG00000003244	rabl3	100	93.162	Xiphophorus_maculatus