EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000010877 (Gene tree)
Gene ID: 109990133
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 5-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9490 bases
Position: chrFKLU01000177.1:317062-326551
Accession: 109990133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014001	zf-RanBP	PF00641.18	6.5e-09	1	1
ENSLBEP00000014032	zf-RanBP	PF00641.18	6.5e-09	1	1
ENSLBEP00000014001	RRM_1	PF00076.22	4.9e-11	1	1
ENSLBEP00000014032	RRM_1	PF00076.22	5e-11	1	1
ENSLBEP00000014001	G-patch	PF01585.23	1.7e-17	1	1
ENSLBEP00000014032	G-patch	PF01585.23	1.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000014794	-	2922	XM_020642139	ENSLBEP00000014001	884 (aa)	XP_020497795	-
ENSLBET00000014832	-	3198	XM_020642137	ENSLBEP00000014032	887 (aa)	XP_020497793	-

Gene Model

Click here to download ENSLBEG00000010877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000010877	-	94	62.297	ENSLBEG00000020858	rbm5	100	62.993
ENSLBEG00000010877	-	58	95.380	ENSLBEG00000002522	-	100	68.259
ENSLBEG00000010877	-	80	41.839	ENSLBEG00000007620	rbm10	77	41.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000010877	-	94	58.560	ENSG00000003756	RBM5	100	58.373	Homo_sapiens
ENSLBEG00000010877	-	94	77.672	ENSAPOG00000006011	-	100	78.029	Acanthochromis_polyacanthus
ENSLBEG00000010877	-	94	62.602	ENSAPOG00000016625	rbm5	100	62.950	Acanthochromis_polyacanthus
ENSLBEG00000010877	-	94	58.442	ENSAMEG00000012005	RBM5	100	58.137	Ailuropoda_melanoleuca
ENSLBEG00000010877	-	63	66.578	ENSACIG00000007571	rbm5	100	66.756	Amphilophus_citrinellus
ENSLBEG00000010877	-	93	68.660	ENSACIG00000021310	-	99	69.498	Amphilophus_citrinellus
ENSLBEG00000010877	-	94	62.731	ENSAOCG00000002880	rbm5	100	62.993	Amphiprion_ocellaris
ENSLBEG00000010877	-	93	71.890	ENSAOCG00000017312	-	99	71.838	Amphiprion_ocellaris
ENSLBEG00000010877	-	86	62.692	ENSAPEG00000011862	rbm5	92	62.853	Amphiprion_percula
ENSLBEG00000010877	-	94	77.910	ENSAPEG00000018222	RBM5	100	78.266	Amphiprion_percula
ENSLBEG00000010877	-	94	62.864	ENSATEG00000024663	rbm5	100	63.562	Anabas_testudineus
ENSLBEG00000010877	-	94	79.502	ENSATEG00000003838	-	100	80.095	Anabas_testudineus
ENSLBEG00000010877	-	88	58.935	ENSAPLG00000011176	RBM5	99	60.678	Anas_platyrhynchos
ENSLBEG00000010877	-	94	56.779	ENSACAG00000008580	RBM5	100	57.010	Anolis_carolinensis
ENSLBEG00000010877	-	94	58.560	ENSANAG00000025199	RBM5	100	58.373	Aotus_nancymaae
ENSLBEG00000010877	-	94	61.806	ENSACLG00000012748	rbm5	100	61.921	Astatotilapia_calliptera
ENSLBEG00000010877	-	83	95.122	ENSACLG00000024198	RBM5	98	95.122	Astatotilapia_calliptera
ENSLBEG00000010877	-	81	66.252	ENSAMXG00000008146	rbm5	100	66.528	Astyanax_mexicanus
ENSLBEG00000010877	-	94	58.323	ENSBTAG00000006330	RBM5	100	58.137	Bos_taurus
ENSLBEG00000010877	-	94	58.392	ENSCJAG00000004740	RBM5	100	58.323	Callithrix_jacchus
ENSLBEG00000010877	-	94	58.442	ENSCAFG00000010866	RBM5	100	58.255	Canis_familiaris
ENSLBEG00000010877	-	94	58.442	ENSCAFG00020022126	RBM5	100	58.255	Canis_lupus_dingo
ENSLBEG00000010877	-	94	58.442	ENSCHIG00000018435	RBM5	100	58.255	Capra_hircus
ENSLBEG00000010877	-	80	56.379	ENSTSYG00000004158	RBM5	98	55.710	Carlito_syrichta
ENSLBEG00000010877	-	94	46.635	ENSCAPG00000013495	RBM5	100	46.635	Cavia_aperea
ENSLBEG00000010877	-	94	58.392	ENSCPOG00000008151	RBM5	100	58.038	Cavia_porcellus
ENSLBEG00000010877	-	88	59.772	ENSCCAG00000026401	RBM5	100	57.477	Cebus_capucinus
ENSLBEG00000010877	-	94	58.442	ENSCATG00000041038	RBM5	100	58.255	Cercocebus_atys
ENSLBEG00000010877	-	94	58.274	ENSCLAG00000007873	RBM5	100	58.137	Chinchilla_lanigera
ENSLBEG00000010877	-	94	58.442	ENSCSAG00000014401	RBM5	100	58.255	Chlorocebus_sabaeus
ENSLBEG00000010877	-	77	53.835	ENSCHOG00000009429	RBM5	85	53.546	Choloepus_hoffmanni
ENSLBEG00000010877	-	87	60.486	ENSCPBG00000002406	RBM5	100	57.870	Chrysemys_picta_bellii
ENSLBEG00000010877	-	94	57.615	ENSCANG00000031250	RBM5	100	57.429	Colobus_angolensis_palliatus
ENSLBEG00000010877	-	94	58.323	ENSCGRG00001010543	Rbm5	100	58.205	Cricetulus_griseus_chok1gshd
ENSLBEG00000010877	-	94	58.323	ENSCGRG00000008475	Rbm5	100	58.205	Cricetulus_griseus_crigri
ENSLBEG00000010877	-	95	58.613	ENSCSEG00000000596	rbm5	97	61.789	Cynoglossus_semilaevis
ENSLBEG00000010877	-	94	61.556	ENSCVAG00000005655	rbm5	100	61.789	Cyprinodon_variegatus
ENSLBEG00000010877	-	81	64.623	ENSDARG00000098280	rbm5	100	59.736	Danio_rerio
ENSLBEG00000010877	-	94	58.678	ENSDNOG00000011756	RBM5	100	58.491	Dasypus_novemcinctus
ENSLBEG00000010877	-	94	58.511	ENSDORG00000007692	Rbm5	100	58.186	Dipodomys_ordii
ENSLBEG00000010877	-	87	56.777	ENSETEG00000012773	RBM5	93	56.781	Echinops_telfairi
ENSLBEG00000010877	-	69	55.200	ENSEBUG00000017034	rbm5	98	41.088	Eptatretus_burgeri
ENSLBEG00000010877	-	94	58.442	ENSEASG00005011835	RBM5	100	58.255	Equus_asinus_asinus
ENSLBEG00000010877	-	94	58.442	ENSECAG00000020447	RBM5	100	58.255	Equus_caballus
ENSLBEG00000010877	-	76	67.822	ENSEEUG00000005943	RBM5	91	67.822	Erinaceus_europaeus
ENSLBEG00000010877	-	94	63.298	ENSELUG00000022467	rbm5	100	63.594	Esox_lucius
ENSLBEG00000010877	-	94	58.392	ENSFCAG00000014639	RBM5	100	58.205	Felis_catus
ENSLBEG00000010877	-	93	57.193	ENSFALG00000008828	RBM5	88	59.096	Ficedula_albicollis
ENSLBEG00000010877	-	94	57.751	ENSFDAG00000001897	RBM5	100	57.751	Fukomys_damarensis
ENSLBEG00000010877	-	86	82.927	ENSFHEG00000015954	rbm5	98	82.927	Fundulus_heteroclitus
ENSLBEG00000010877	-	94	56.563	ENSGMOG00000007810	-	100	56.086	Gadus_morhua
ENSLBEG00000010877	-	93	60.993	ENSGMOG00000016224	rbm5	99	60.993	Gadus_morhua
ENSLBEG00000010877	-	88	58.779	ENSGALG00000039288	RBM5	88	58.482	Gallus_gallus
ENSLBEG00000010877	-	94	61.938	ENSGAFG00000010690	rbm5	100	63.237	Gambusia_affinis
ENSLBEG00000010877	-	94	72.674	ENSGACG00000000858	-	100	72.438	Gasterosteus_aculeatus
ENSLBEG00000010877	-	94	63.090	ENSGACG00000010469	rbm5	100	63.604	Gasterosteus_aculeatus
ENSLBEG00000010877	-	82	59.677	ENSGAGG00000007935	RBM5	99	57.143	Gopherus_agassizii
ENSLBEG00000010877	-	94	58.442	ENSGGOG00000014490	RBM5	100	58.255	Gorilla_gorilla
ENSLBEG00000010877	-	94	61.921	ENSHBUG00000001941	rbm5	100	62.037	Haplochromis_burtoni
ENSLBEG00000010877	-	83	95.122	ENSHBUG00000011901	-	98	95.122	Haplochromis_burtoni
ENSLBEG00000010877	-	94	58.107	ENSHGLG00000014844	RBM5	100	57.969	Heterocephalus_glaber_female
ENSLBEG00000010877	-	94	58.274	ENSHGLG00100010739	RBM5	100	58.137	Heterocephalus_glaber_male
ENSLBEG00000010877	-	89	61.700	ENSHCOG00000017110	rbm5	98	62.192	Hippocampus_comes
ENSLBEG00000010877	-	94	64.004	ENSHCOG00000004536	-	100	64.022	Hippocampus_comes
ENSLBEG00000010877	-	94	62.602	ENSIPUG00000000640	rbm5	100	64.085	Ictalurus_punctatus
ENSLBEG00000010877	-	94	58.392	ENSSTOG00000013856	RBM5	100	58.255	Ictidomys_tridecemlineatus
ENSLBEG00000010877	-	94	58.678	ENSJJAG00000008844	Rbm5	100	58.491	Jaculus_jaculus
ENSLBEG00000010877	-	94	62.924	ENSKMAG00000006663	rbm5	100	62.924	Kryptolebias_marmoratus
ENSLBEG00000010877	-	93	59.220	ENSLACG00000016572	RBM5	100	60.241	Latimeria_chalumnae
ENSLBEG00000010877	-	94	62.756	ENSLOCG00000010774	rbm5	100	62.900	Lepisosteus_oculatus
ENSLBEG00000010877	-	94	58.580	ENSLAFG00000006733	RBM5	100	58.225	Loxodonta_africana
ENSLBEG00000010877	-	94	58.442	ENSMFAG00000031609	RBM5	100	58.255	Macaca_fascicularis
ENSLBEG00000010877	-	88	59.823	ENSMMUG00000004921	RBM5	99	58.126	Macaca_mulatta
ENSLBEG00000010877	-	94	58.442	ENSMNEG00000044394	RBM5	100	58.255	Macaca_nemestrina
ENSLBEG00000010877	-	94	57.143	ENSMLEG00000034689	RBM5	100	56.840	Mandrillus_leucophaeus
ENSLBEG00000010877	-	94	79.172	ENSMAMG00000023948	-	100	71.718	Mastacembelus_armatus
ENSLBEG00000010877	-	85	80.488	ENSMAMG00000017277	rbm5	97	80.488	Mastacembelus_armatus
ENSLBEG00000010877	-	94	71.853	ENSMZEG00005010035	-	100	72.565	Maylandia_zebra
ENSLBEG00000010877	-	94	61.806	ENSMZEG00005015328	rbm5	100	61.921	Maylandia_zebra
ENSLBEG00000010877	-	88	58.854	ENSMGAG00000003972	RBM5	100	60.606	Meleagris_gallopavo
ENSLBEG00000010877	-	88	60.076	ENSMAUG00000020572	Rbm5	98	58.482	Mesocricetus_auratus
ENSLBEG00000010877	-	94	58.442	ENSMICG00000016179	RBM5	100	58.255	Microcebus_murinus
ENSLBEG00000010877	-	94	58.323	ENSMOCG00000017479	Rbm5	100	58.657	Microtus_ochrogaster
ENSLBEG00000010877	-	93	56.699	ENSMMOG00000021804	-	99	60.407	Mola_mola
ENSLBEG00000010877	-	94	57.223	ENSMMOG00000015342	rbm5	100	56.720	Mola_mola
ENSLBEG00000010877	-	94	58.442	ENSMODG00000012301	RBM5	100	58.471	Monodelphis_domestica
ENSLBEG00000010877	-	94	74.911	ENSMALG00000016769	-	100	75.268	Monopterus_albus
ENSLBEG00000010877	-	93	57.629	ENSMALG00000000609	rbm5	99	57.746	Monopterus_albus
ENSLBEG00000010877	-	94	58.392	MGP_CAROLIEiJ_G0032660	Rbm5	96	65.541	Mus_caroli
ENSLBEG00000010877	-	94	58.392	ENSMUSG00000032580	Rbm5	95	65.541	Mus_musculus
ENSLBEG00000010877	-	94	58.274	MGP_PahariEiJ_G0015528	Rbm5	90	69.065	Mus_pahari
ENSLBEG00000010877	-	94	58.274	MGP_SPRETEiJ_G0033805	Rbm5	96	65.541	Mus_spretus
ENSLBEG00000010877	-	94	58.796	ENSMLUG00000007875	RBM5	100	59.128	Myotis_lucifugus
ENSLBEG00000010877	-	94	58.274	ENSNGAG00000011777	Rbm5	100	57.951	Nannospalax_galili
ENSLBEG00000010877	-	94	61.806	ENSNBRG00000018097	rbm5	100	61.921	Neolamprologus_brichardi
ENSLBEG00000010877	-	92	66.507	ENSNBRG00000004400	RBM5	100	66.747	Neolamprologus_brichardi
ENSLBEG00000010877	-	94	58.442	ENSNLEG00000006943	RBM5	100	58.255	Nomascus_leucogenys
ENSLBEG00000010877	-	88	54.880	ENSMEUG00000012994	RBM5	99	53.800	Notamacropus_eugenii
ENSLBEG00000010877	-	87	58.077	ENSOPRG00000015154	RBM5	93	57.668	Ochotona_princeps
ENSLBEG00000010877	-	94	58.156	ENSODEG00000016254	-	100	57.746	Octodon_degus
ENSLBEG00000010877	-	94	56.770	ENSODEG00000019111	-	100	56.517	Octodon_degus
ENSLBEG00000010877	-	94	62.269	ENSONIG00000004107	rbm5	100	62.269	Oreochromis_niloticus
ENSLBEG00000010877	-	94	73.341	ENSONIG00000019007	RBM5	100	74.052	Oreochromis_niloticus
ENSLBEG00000010877	-	83	59.115	ENSOANG00000006557	RBM5	100	59.947	Ornithorhynchus_anatinus
ENSLBEG00000010877	-	94	58.205	ENSOCUG00000011652	RBM5	100	57.882	Oryctolagus_cuniculus
ENSLBEG00000010877	-	94	66.706	ENSORLG00000001053	-	100	66.746	Oryzias_latipes
ENSLBEG00000010877	-	89	60.074	ENSORLG00000003369	rbm5	99	60.565	Oryzias_latipes
ENSLBEG00000010877	-	94	60.961	ENSORLG00020021744	rbm5	100	61.430	Oryzias_latipes_hni
ENSLBEG00000010877	-	90	65.212	ENSORLG00020006782	-	98	65.255	Oryzias_latipes_hni
ENSLBEG00000010877	-	90	65.629	ENSORLG00015002854	-	98	65.629	Oryzias_latipes_hsok
ENSLBEG00000010877	-	85	80.488	ENSORLG00015018379	rbm5	97	80.488	Oryzias_latipes_hsok
ENSLBEG00000010877	-	94	61.387	ENSOMEG00000002219	rbm5	100	61.618	Oryzias_melastigma
ENSLBEG00000010877	-	64	72.165	ENSOMEG00000010653	-	89	72.165	Oryzias_melastigma
ENSLBEG00000010877	-	88	58.142	ENSOGAG00000004205	RBM5	100	57.868	Otolemur_garnettii
ENSLBEG00000010877	-	94	58.442	ENSOARG00000010923	RBM5	100	58.255	Ovis_aries
ENSLBEG00000010877	-	94	58.442	ENSPPAG00000043010	RBM5	100	58.255	Pan_paniscus
ENSLBEG00000010877	-	94	58.392	ENSPPRG00000005404	RBM5	100	58.205	Panthera_pardus
ENSLBEG00000010877	-	94	58.392	ENSPTIG00000000962	RBM5	100	58.205	Panthera_tigris_altaica
ENSLBEG00000010877	-	94	58.442	ENSPTRG00000014946	RBM5	100	58.255	Pan_troglodytes
ENSLBEG00000010877	-	94	58.442	ENSPANG00000018507	RBM5	100	58.255	Papio_anubis
ENSLBEG00000010877	-	94	62.587	ENSPKIG00000024837	RBM5	100	62.471	Paramormyrops_kingsleyae
ENSLBEG00000010877	-	73	54.046	ENSPKIG00000019187	-	100	53.775	Paramormyrops_kingsleyae
ENSLBEG00000010877	-	83	59.680	ENSPSIG00000016073	RBM5	100	60.133	Pelodiscus_sinensis
ENSLBEG00000010877	-	75	54.030	ENSPMGG00000017347	rbm5	100	54.627	Periophthalmus_magnuspinnatus
ENSLBEG00000010877	-	82	90.000	ENSPMGG00000004719	-	97	90.244	Periophthalmus_magnuspinnatus
ENSLBEG00000010877	-	93	40.733	ENSPMAG00000001998	rbm5	99	42.395	Petromyzon_marinus
ENSLBEG00000010877	-	94	58.323	ENSPCIG00000021531	RBM5	100	58.353	Phascolarctos_cinereus
ENSLBEG00000010877	-	94	62.125	ENSPLAG00000006318	rbm5	100	62.933	Poecilia_latipinna
ENSLBEG00000010877	-	70	61.093	ENSPMEG00000008651	rbm5	99	61.415	Poecilia_mexicana
ENSLBEG00000010877	-	94	62.457	ENSPMEG00000004295	rbm5	100	63.268	Poecilia_mexicana
ENSLBEG00000010877	-	94	62.197	ENSPREG00000003795	rbm5	100	62.890	Poecilia_reticulata
ENSLBEG00000010877	-	52	57.589	ENSPCAG00000005459	RBM5	70	57.416	Procavia_capensis
ENSLBEG00000010877	-	94	58.629	ENSPCOG00000025840	RBM5	100	58.323	Propithecus_coquereli
ENSLBEG00000010877	-	94	56.789	ENSPVAG00000006812	RBM5	100	56.553	Pteropus_vampyrus
ENSLBEG00000010877	-	94	61.806	ENSPNYG00000014787	rbm5	100	61.921	Pundamilia_nyererei
ENSLBEG00000010877	-	80	73.558	ENSPNYG00000006361	RBM5	99	74.402	Pundamilia_nyererei
ENSLBEG00000010877	-	94	64.136	ENSPNAG00000012070	rbm5	100	64.486	Pygocentrus_nattereri
ENSLBEG00000010877	-	94	58.865	ENSRNOG00000018153	Rbm5	100	58.678	Rattus_norvegicus
ENSLBEG00000010877	-	94	58.323	ENSRBIG00000012679	RBM5	100	58.137	Rhinopithecus_bieti
ENSLBEG00000010877	-	94	58.323	ENSRROG00000041331	RBM5	100	58.137	Rhinopithecus_roxellana
ENSLBEG00000010877	-	94	58.442	ENSSBOG00000006324	RBM5	100	58.255	Saimiri_boliviensis_boliviensis
ENSLBEG00000010877	-	94	58.442	ENSSHAG00000018260	RBM5	100	58.353	Sarcophilus_harrisii
ENSLBEG00000010877	-	95	62.642	ENSSFOG00015019052	rbm5	96	63.751	Scleropages_formosus
ENSLBEG00000010877	-	94	63.658	ENSSFOG00015019645	-	99	66.931	Scleropages_formosus
ENSLBEG00000010877	-	94	63.879	ENSSMAG00000017106	rbm5	100	63.562	Scophthalmus_maximus
ENSLBEG00000010877	-	94	62.312	ENSSDUG00000019775	rbm5	100	63.079	Seriola_dumerili
ENSLBEG00000010877	-	94	62.428	ENSSLDG00000002329	rbm5	100	63.194	Seriola_lalandi_dorsalis
ENSLBEG00000010877	-	94	79.976	ENSSLDG00000015996	-	100	79.976	Seriola_lalandi_dorsalis
ENSLBEG00000010877	-	52	72.368	ENSSARG00000009724	-	66	73.333	Sorex_araneus
ENSLBEG00000010877	-	93	57.926	ENSSPUG00000001876	RBM5	90	57.569	Sphenodon_punctatus
ENSLBEG00000010877	-	94	77.962	ENSSPAG00000020011	-	100	78.199	Stegastes_partitus
ENSLBEG00000010877	-	94	61.921	ENSSPAG00000019638	rbm5	100	62.529	Stegastes_partitus
ENSLBEG00000010877	-	86	70.732	ENSSSCG00000011395	RBM5	98	70.732	Sus_scrofa
ENSLBEG00000010877	-	88	54.033	ENSTGUG00000006417	RBM5	98	57.071	Taeniopygia_guttata
ENSLBEG00000010877	-	94	62.005	ENSTRUG00000008292	rbm5	100	65.775	Takifugu_rubripes
ENSLBEG00000010877	-	92	47.704	ENSTNIG00000014742	rbm5	89	60.300	Tetraodon_nigroviridis
ENSLBEG00000010877	-	94	52.893	ENSTBEG00000005424	RBM5	100	52.879	Tupaia_belangeri
ENSLBEG00000010877	-	94	53.783	ENSTTRG00000007717	RBM5	100	53.837	Tursiops_truncatus
ENSLBEG00000010877	-	94	58.442	ENSUAMG00000028347	RBM5	100	58.137	Ursus_americanus
ENSLBEG00000010877	-	94	58.442	ENSUMAG00000022027	RBM5	100	58.137	Ursus_maritimus
ENSLBEG00000010877	-	83	56.499	ENSVPAG00000009388	RBM5	99	56.291	Vicugna_pacos
ENSLBEG00000010877	-	94	58.442	ENSVVUG00000028647	RBM5	100	58.255	Vulpes_vulpes
ENSLBEG00000010877	-	94	62.428	ENSXMAG00000016369	rbm5	100	63.353	Xiphophorus_maculatus