EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000010915 (Gene tree)
Gene ID: 109982593
Gene Symbol: zgc:171480
Alias: -
Full Name: 39S ribosomal protein L55%2C mitochondrial-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 1882 bases
Position: chrFKLU01000044.1:1903392-1905273
Accession: 109982593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014049	Mitoc_L55	PF09776.9	1.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000014853	-	1026	XM_020631893	ENSLBEP00000014049	126 (aa)	XP_020487549	UPI0009B48034

Gene Model

Click here to download ENSLBEG00000010915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000010915	zgc:171480	100	100.000	ENSLBEG00000016107	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000010915	zgc:171480	100	63.636	ENSAPOG00000002881	zgc:171480	99	63.636	Acanthochromis_polyacanthus
ENSLBEG00000010915	zgc:171480	100	70.455	ENSACIG00000001646	zgc:171480	97	70.455	Amphilophus_citrinellus
ENSLBEG00000010915	zgc:171480	96	75.610	ENSAOCG00000016155	zgc:171480	85	75.610	Amphiprion_ocellaris
ENSLBEG00000010915	zgc:171480	96	76.423	ENSAPEG00000022327	zgc:171480	85	76.423	Amphiprion_percula
ENSLBEG00000010915	zgc:171480	84	77.358	ENSATEG00000005625	zgc:171480	72	77.358	Anabas_testudineus
ENSLBEG00000010915	zgc:171480	98	52.800	ENSACAG00000006897	-	94	52.800	Anolis_carolinensis
ENSLBEG00000010915	zgc:171480	100	67.407	ENSACLG00000005172	zgc:171480	98	67.407	Astatotilapia_calliptera
ENSLBEG00000010915	zgc:171480	88	61.261	ENSAMXG00000043839	zgc:171480	84	61.818	Astyanax_mexicanus
ENSLBEG00000010915	zgc:171480	85	57.407	ENSCPBG00000001771	-	86	57.407	Chrysemys_picta_bellii
ENSLBEG00000010915	zgc:171480	89	60.714	ENSCSEG00000019533	zgc:171480	80	60.714	Cynoglossus_semilaevis
ENSLBEG00000010915	zgc:171480	96	59.836	ENSDARG00000043402	zgc:171480	92	59.836	Danio_rerio
ENSLBEG00000010915	zgc:171480	90	56.522	ENSELUG00000007716	zgc:171480	88	56.522	Esox_lucius
ENSLBEG00000010915	zgc:171480	72	47.253	ENSFALG00000001083	-	94	47.253	Ficedula_albicollis
ENSLBEG00000010915	zgc:171480	77	42.000	ENSFALG00000001082	-	68	42.000	Ficedula_albicollis
ENSLBEG00000010915	zgc:171480	83	74.038	ENSFHEG00000000203	zgc:171480	88	67.480	Fundulus_heteroclitus
ENSLBEG00000010915	zgc:171480	81	75.490	ENSGMOG00000019009	zgc:171480	100	75.490	Gadus_morhua
ENSLBEG00000010915	zgc:171480	79	48.485	ENSGALG00000038820	-	87	48.485	Gallus_gallus
ENSLBEG00000010915	zgc:171480	83	75.962	ENSGAFG00000004832	-	72	75.962	Gambusia_affinis
ENSLBEG00000010915	zgc:171480	73	83.696	ENSGACG00000002136	zgc:171480	100	83.696	Gasterosteus_aculeatus
ENSLBEG00000010915	zgc:171480	97	51.220	ENSGAGG00000001806	-	99	51.220	Gopherus_agassizii
ENSLBEG00000010915	zgc:171480	100	67.407	ENSHBUG00000007895	zgc:171480	98	67.407	Haplochromis_burtoni
ENSLBEG00000010915	zgc:171480	74	80.645	ENSHCOG00000003526	zgc:171480	51	80.645	Hippocampus_comes
ENSLBEG00000010915	zgc:171480	83	61.321	ENSIPUG00000001273	mrpl55	80	61.321	Ictalurus_punctatus
ENSLBEG00000010915	zgc:171480	82	71.845	ENSKMAG00000002011	zgc:171480	81	71.845	Kryptolebias_marmoratus
ENSLBEG00000010915	zgc:171480	94	55.906	ENSLACG00000016281	zgc:171480	96	55.906	Latimeria_chalumnae
ENSLBEG00000010915	zgc:171480	100	63.889	ENSMAMG00000022250	zgc:171480	98	63.889	Mastacembelus_armatus
ENSLBEG00000010915	zgc:171480	100	67.407	ENSMZEG00005015585	zgc:171480	98	67.407	Maylandia_zebra
ENSLBEG00000010915	zgc:171480	79	47.475	ENSMGAG00000002612	-	87	47.475	Meleagris_gallopavo
ENSLBEG00000010915	zgc:171480	82	59.223	ENSMMOG00000008740	-	78	59.223	Mola_mola
ENSLBEG00000010915	zgc:171480	88	68.468	ENSMALG00000019823	zgc:171480	88	68.468	Monopterus_albus
ENSLBEG00000010915	zgc:171480	100	68.148	ENSNBRG00000019447	zgc:171480	98	68.148	Neolamprologus_brichardi
ENSLBEG00000010915	zgc:171480	100	67.407	ENSONIG00000007645	zgc:171480	100	67.407	Oreochromis_niloticus
ENSLBEG00000010915	zgc:171480	80	68.317	ENSORLG00020006963	zgc:171480	75	68.317	Oryzias_latipes_hni
ENSLBEG00000010915	zgc:171480	80	69.307	ENSORLG00015003266	zgc:171480	75	69.307	Oryzias_latipes_hsok
ENSLBEG00000010915	zgc:171480	79	70.000	ENSOMEG00000008184	zgc:171480	73	70.000	Oryzias_melastigma
ENSLBEG00000010915	zgc:171480	83	60.748	ENSPKIG00000006753	zgc:171480	83	60.748	Paramormyrops_kingsleyae
ENSLBEG00000010915	zgc:171480	79	54.000	ENSPSIG00000010893	-	80	54.000	Pelodiscus_sinensis
ENSLBEG00000010915	zgc:171480	97	59.350	ENSPMGG00000012657	-	92	59.350	Periophthalmus_magnuspinnatus
ENSLBEG00000010915	zgc:171480	74	45.263	ENSPMAG00000000867	zgc:171480	100	44.068	Petromyzon_marinus
ENSLBEG00000010915	zgc:171480	96	46.721	ENSPCIG00000021848	-	94	46.721	Phascolarctos_cinereus
ENSLBEG00000010915	zgc:171480	83	74.038	ENSPFOG00000012703	zgc:171480	74	74.038	Poecilia_formosa
ENSLBEG00000010915	zgc:171480	83	75.000	ENSPREG00000020328	zgc:171480	74	75.000	Poecilia_reticulata
ENSLBEG00000010915	zgc:171480	83	60.377	ENSPNAG00000017309	zgc:171480	80	60.377	Pygocentrus_nattereri
ENSLBEG00000010915	zgc:171480	94	59.504	ENSSFOG00015015668	mrpl55	92	59.504	Scleropages_formosus
ENSLBEG00000010915	zgc:171480	100	68.613	ENSSMAG00000005429	zgc:171480	97	68.613	Scophthalmus_maximus
ENSLBEG00000010915	zgc:171480	100	64.748	ENSSDUG00000022556	zgc:171480	95	64.748	Seriola_dumerili
ENSLBEG00000010915	zgc:171480	100	65.468	ENSSLDG00000019598	zgc:171480	95	65.468	Seriola_lalandi_dorsalis
ENSLBEG00000010915	zgc:171480	93	49.153	ENSSPUG00000000735	-	94	49.153	Sphenodon_punctatus
ENSLBEG00000010915	zgc:171480	96	71.901	ENSSPAG00000011598	zgc:171480	84	71.901	Stegastes_partitus
ENSLBEG00000010915	zgc:171480	83	71.154	ENSTRUG00000003082	zgc:171480	73	71.154	Takifugu_rubripes
ENSLBEG00000010915	zgc:171480	96	65.289	ENSXCOG00000005887	zgc:171480	94	65.289	Xiphophorus_couchianus
ENSLBEG00000010915	zgc:171480	83	74.038	ENSXMAG00000007937	zgc:171480	74	74.038	Xiphophorus_maculatus