EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000010933 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 6337 bases
Position: chrFKLU01000684.1:182116-188452
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014168	zf-C2H2	PF00096.26	1.7e-19	1	3
ENSLBEP00000014168	zf-C2H2	PF00096.26	1.7e-19	2	3
ENSLBEP00000014168	zf-C2H2	PF00096.26	1.7e-19	3	3
ENSLBEP00000014128	zf-C2H2	PF00096.26	4.2e-18	1	3
ENSLBEP00000014128	zf-C2H2	PF00096.26	4.2e-18	2	3
ENSLBEP00000014128	zf-C2H2	PF00096.26	4.2e-18	3	3
ENSLBEP00000014186	zf-C2H2	PF00096.26	2.2e-15	1	2
ENSLBEP00000014186	zf-C2H2	PF00096.26	2.2e-15	2	2
ENSLBEP00000014168	zf-met	PF12874.7	1.3e-12	1	2
ENSLBEP00000014168	zf-met	PF12874.7	1.3e-12	2	2
ENSLBEP00000014128	zf-met	PF12874.7	6.1e-11	1	2
ENSLBEP00000014128	zf-met	PF12874.7	6.1e-11	2	2
ENSLBEP00000014186	zf-met	PF12874.7	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000014987	-	1257	-	ENSLBEP00000014168	418 (aa)	-	-
ENSLBET00000015005	-	1287	-	ENSLBEP00000014186	428 (aa)	-	-
ENSLBET00000014946	-	1542	-	ENSLBEP00000014128	513 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000010933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000010933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000010933	-	51	30.882	ENSLBEG00000013570	-	97	40.860
ENSLBEG00000010933	-	50	42.105	ENSLBEG00000010165	-	93	41.667
ENSLBEG00000010933	-	98	31.452	ENSLBEG00000012151	zbtb48	80	31.452
ENSLBEG00000010933	-	61	38.947	ENSLBEG00000025689	-	88	38.947
ENSLBEG00000010933	-	60	32.353	ENSLBEG00000011986	-	95	32.667
ENSLBEG00000010933	-	54	42.308	ENSLBEG00000008606	-	92	43.878
ENSLBEG00000010933	-	50	45.902	ENSLBEG00000004892	-	98	45.902
ENSLBEG00000010933	-	72	33.071	ENSLBEG00000014796	zbtb18	53	33.071
ENSLBEG00000010933	-	56	42.857	ENSLBEG00000001756	-	98	42.857
ENSLBEG00000010933	-	94	39.640	ENSLBEG00000025803	-	66	39.640
ENSLBEG00000010933	-	52	44.304	ENSLBEG00000009580	-	86	41.860
ENSLBEG00000010933	-	66	34.444	ENSLBEG00000019067	zbtb47b	59	35.000
ENSLBEG00000010933	-	93	41.379	ENSLBEG00000024306	hic2	66	59.124
ENSLBEG00000010933	-	72	33.333	ENSLBEG00000008064	bcl6ab	56	33.333
ENSLBEG00000010933	-	53	39.216	ENSLBEG00000007937	-	83	39.216
ENSLBEG00000010933	-	50	40.566	ENSLBEG00000002357	-	92	41.346
ENSLBEG00000010933	-	79	68.807	ENSLBEG00000021810	hic1	53	79.012
ENSLBEG00000010933	-	59	30.435	ENSLBEG00000018509	-	91	39.535
ENSLBEG00000010933	-	99	95.349	ENSLBEG00000013821	hic2	99	95.349
ENSLBEG00000010933	-	53	33.951	ENSLBEG00000026552	-	60	33.951

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000010933	-	72	59.322	ENSG00000169635	HIC2	63	52.968	Homo_sapiens
ENSLBEG00000010933	-	79	58.394	ENSAPOG00000005694	hic2	70	51.515	Acanthochromis_polyacanthus
ENSLBEG00000010933	-	77	58.394	ENSACIG00000018835	hic2	63	58.394	Amphilophus_citrinellus
ENSLBEG00000010933	-	93	41.667	ENSAOCG00000001395	hic2	70	51.515	Amphiprion_ocellaris
ENSLBEG00000010933	-	93	41.667	ENSAPEG00000016621	hic2	70	51.515	Amphiprion_percula
ENSLBEG00000010933	-	93	40.690	ENSATEG00000021233	hic2	62	59.124	Anabas_testudineus
ENSLBEG00000010933	-	72	59.322	ENSAPLG00000002158	HIC2	67	54.327	Anas_platyrhynchos
ENSLBEG00000010933	-	72	59.322	ENSANAG00000027852	HIC2	54	59.322	Aotus_nancymaae
ENSLBEG00000010933	-	93	41.667	ENSACLG00000010236	hic2	62	59.124	Astatotilapia_calliptera
ENSLBEG00000010933	-	98	41.401	ENSAMXG00000030914	hic1l	99	40.308	Astyanax_mexicanus
ENSLBEG00000010933	-	93	39.789	ENSAMXG00000024918	hic2	96	41.166	Astyanax_mexicanus
ENSLBEG00000010933	-	73	57.627	ENSBTAG00000005951	HIC2	55	57.627	Bos_taurus
ENSLBEG00000010933	-	72	59.322	ENSCJAG00000006497	HIC2	67	52.511	Callithrix_jacchus
ENSLBEG00000010933	-	81	61.236	ENSCAFG00000032493	HIC2	67	54.167	Canis_familiaris
ENSLBEG00000010933	-	81	61.236	ENSCAFG00020015055	HIC2	67	54.167	Canis_lupus_dingo
ENSLBEG00000010933	-	73	57.627	ENSCHIG00000007511	HIC2	55	57.627	Capra_hircus
ENSLBEG00000010933	-	65	61.236	ENSTSYG00000031032	HIC2	63	54.167	Carlito_syrichta
ENSLBEG00000010933	-	86	49.309	ENSCPOG00000001134	HIC2	67	50.000	Cavia_porcellus
ENSLBEG00000010933	-	72	59.322	ENSCCAG00000023925	HIC2	67	54.091	Cebus_capucinus
ENSLBEG00000010933	-	72	59.322	ENSCATG00000032567	HIC2	63	52.968	Cercocebus_atys
ENSLBEG00000010933	-	83	51.037	ENSCLAG00000017018	HIC2	70	49.603	Chinchilla_lanigera
ENSLBEG00000010933	-	72	59.322	ENSCSAG00000013356	HIC2	63	52.968	Chlorocebus_sabaeus
ENSLBEG00000010933	-	89	53.738	ENSCPBG00000010464	HIC2	75	50.000	Chrysemys_picta_bellii
ENSLBEG00000010933	-	72	59.322	ENSCANG00000040132	HIC2	63	52.968	Colobus_angolensis_palliatus
ENSLBEG00000010933	-	66	59.322	ENSCGRG00001021159	Hic2	55	59.322	Cricetulus_griseus_chok1gshd
ENSLBEG00000010933	-	66	59.322	ENSCGRG00000006928	Hic2	55	59.322	Cricetulus_griseus_crigri
ENSLBEG00000010933	-	66	62.185	ENSCSEG00000019899	hic2	63	55.612	Cynoglossus_semilaevis
ENSLBEG00000010933	-	93	40.696	ENSCVAG00000019191	hic2	60	63.025	Cyprinodon_variegatus
ENSLBEG00000010933	-	98	58.462	ENSDARG00000100497	hic2	98	40.820	Danio_rerio
ENSLBEG00000010933	-	99	41.525	ENSDARG00000045660	hic1l	100	41.737	Danio_rerio
ENSLBEG00000010933	-	81	61.236	ENSDNOG00000003162	HIC2	63	55.825	Dasypus_novemcinctus
ENSLBEG00000010933	-	81	61.236	ENSDORG00000028360	Hic2	64	53.917	Dipodomys_ordii
ENSLBEG00000010933	-	73	53.704	ENSEASG00005022299	HIC2	67	54.167	Equus_asinus_asinus
ENSLBEG00000010933	-	73	53.704	ENSECAG00000017997	HIC2	67	54.167	Equus_caballus
ENSLBEG00000010933	-	93	42.114	ENSELUG00000021193	hic2	98	39.757	Esox_lucius
ENSLBEG00000010933	-	93	45.018	ENSELUG00000002408	hic2	98	45.138	Esox_lucius
ENSLBEG00000010933	-	81	61.236	ENSFCAG00000023903	HIC2	67	53.488	Felis_catus
ENSLBEG00000010933	-	73	57.724	ENSFALG00000014495	HIC2	67	54.327	Ficedula_albicollis
ENSLBEG00000010933	-	74	60.169	ENSFDAG00000011245	HIC2	58	60.169	Fukomys_damarensis
ENSLBEG00000010933	-	93	40.901	ENSFHEG00000006964	hic2	62	58.394	Fundulus_heteroclitus
ENSLBEG00000010933	-	74	63.866	ENSGMOG00000011705	hic2	63	63.866	Gadus_morhua
ENSLBEG00000010933	-	73	58.537	ENSGALG00000033416	HIC2	67	54.327	Gallus_gallus
ENSLBEG00000010933	-	93	41.397	ENSGAFG00000018031	hic2	62	58.394	Gambusia_affinis
ENSLBEG00000010933	-	93	42.757	ENSGACG00000004268	hic2	60	58.394	Gasterosteus_aculeatus
ENSLBEG00000010933	-	89	53.738	ENSGAGG00000016023	HIC2	75	50.000	Gopherus_agassizii
ENSLBEG00000010933	-	72	59.322	ENSGGOG00000037763	HIC2	63	52.968	Gorilla_gorilla
ENSLBEG00000010933	-	93	41.667	ENSHBUG00000012959	hic2	62	59.124	Haplochromis_burtoni
ENSLBEG00000010933	-	94	48.571	ENSHGLG00000008541	HIC2	67	47.826	Heterocephalus_glaber_female
ENSLBEG00000010933	-	83	58.427	ENSHGLG00100000200	-	63	51.869	Heterocephalus_glaber_male
ENSLBEG00000010933	-	83	54.386	ENSHGLG00100007585	-	56	54.386	Heterocephalus_glaber_male
ENSLBEG00000010933	-	91	56.923	ENSIPUG00000013986	hic2	98	41.446	Ictalurus_punctatus
ENSLBEG00000010933	-	99	41.578	ENSIPUG00000003207	hic2	100	40.512	Ictalurus_punctatus
ENSLBEG00000010933	-	73	61.236	ENSSTOG00000006360	HIC2	63	54.167	Ictidomys_tridecemlineatus
ENSLBEG00000010933	-	81	60.694	ENSJJAG00000009939	Hic2	67	53.953	Jaculus_jaculus
ENSLBEG00000010933	-	71	57.627	ENSLACG00000011864	HIC2	91	34.004	Latimeria_chalumnae
ENSLBEG00000010933	-	93	40.972	ENSLOCG00000002169	hic2	68	53.604	Lepisosteus_oculatus
ENSLBEG00000010933	-	72	59.322	ENSMFAG00000004992	HIC2	63	52.968	Macaca_fascicularis
ENSLBEG00000010933	-	72	59.322	ENSMMUG00000031089	HIC2	63	52.968	Macaca_mulatta
ENSLBEG00000010933	-	72	59.322	ENSMNEG00000003509	HIC2	63	52.968	Macaca_nemestrina
ENSLBEG00000010933	-	72	59.322	ENSMLEG00000031489	HIC2	63	52.968	Mandrillus_leucophaeus
ENSLBEG00000010933	-	93	41.638	ENSMAMG00000013476	hic2	62	59.124	Mastacembelus_armatus
ENSLBEG00000010933	-	72	58.394	ENSMZEG00005010459	hic2	63	58.394	Maylandia_zebra
ENSLBEG00000010933	-	89	54.419	ENSMGAG00000000949	HIC2	67	54.327	Meleagris_gallopavo
ENSLBEG00000010933	-	93	39.353	ENSMAUG00000019790	Hic2	63	59.322	Mesocricetus_auratus
ENSLBEG00000010933	-	65	60.571	ENSMICG00000044556	HIC2	63	53.302	Microcebus_murinus
ENSLBEG00000010933	-	81	61.236	ENSMOCG00000021488	Hic2	65	54.630	Microtus_ochrogaster
ENSLBEG00000010933	-	98	81.481	ENSMMOG00000012924	hic2	99	79.747	Mola_mola
ENSLBEG00000010933	-	82	58.564	ENSMODG00000017662	HIC2	59	57.627	Monodelphis_domestica
ENSLBEG00000010933	-	93	41.297	ENSMALG00000021292	hic2	64	58.394	Monopterus_albus
ENSLBEG00000010933	-	71	59.322	MGP_CAROLIEiJ_G0020510	Hic2	69	49.600	Mus_caroli
ENSLBEG00000010933	-	65	60.452	ENSMUSG00000050240	Hic2	65	53.953	Mus_musculus
ENSLBEG00000010933	-	71	59.322	MGP_PahariEiJ_G0016215	Hic2	69	49.798	Mus_pahari
ENSLBEG00000010933	-	65	60.452	MGP_SPRETEiJ_G0021405	Hic2	58	59.322	Mus_spretus
ENSLBEG00000010933	-	72	56.069	ENSMPUG00000003198	HIC2	67	53.488	Mustela_putorius_furo
ENSLBEG00000010933	-	89	53.425	ENSMLUG00000009669	HIC2	64	54.206	Myotis_lucifugus
ENSLBEG00000010933	-	84	58.421	ENSNGAG00000000850	Hic2	66	53.241	Nannospalax_galili
ENSLBEG00000010933	-	93	41.513	ENSNBRG00000020589	hic2	62	59.124	Neolamprologus_brichardi
ENSLBEG00000010933	-	75	60.169	ENSNLEG00000000203	HIC2	58	60.625	Nomascus_leucogenys
ENSLBEG00000010933	-	84	50.000	ENSODEG00000016054	HIC2	68	49.801	Octodon_degus
ENSLBEG00000010933	-	93	42.007	ENSONIG00000014335	hic2	63	59.124	Oreochromis_niloticus
ENSLBEG00000010933	-	68	57.895	ENSOCUG00000010516	HIC2	61	54.167	Oryctolagus_cuniculus
ENSLBEG00000010933	-	75	63.025	ENSORLG00000002131	hic2	98	39.865	Oryzias_latipes
ENSLBEG00000010933	-	75	63.025	ENSORLG00020006527	hic2	98	39.865	Oryzias_latipes_hni
ENSLBEG00000010933	-	89	62.185	ENSORLG00015016278	hic2	64	62.185	Oryzias_latipes_hsok
ENSLBEG00000010933	-	75	63.025	ENSOMEG00000018752	hic2	64	63.025	Oryzias_melastigma
ENSLBEG00000010933	-	79	53.488	ENSOGAG00000030274	HIC2	63	53.488	Otolemur_garnettii
ENSLBEG00000010933	-	72	59.322	ENSPPAG00000037732	HIC2	63	52.968	Pan_paniscus
ENSLBEG00000010933	-	81	61.236	ENSPPRG00000021035	-	66	53.488	Panthera_pardus
ENSLBEG00000010933	-	72	59.322	ENSPTRG00000046730	HIC2	63	52.968	Pan_troglodytes
ENSLBEG00000010933	-	72	59.322	ENSPANG00000024301	HIC2	63	52.968	Papio_anubis
ENSLBEG00000010933	-	72	61.864	ENSPKIG00000002187	hic2	58	61.864	Paramormyrops_kingsleyae
ENSLBEG00000010933	-	80	59.322	ENSPKIG00000017929	-	67	59.322	Paramormyrops_kingsleyae
ENSLBEG00000010933	-	89	53.738	ENSPSIG00000000992	-	69	57.724	Pelodiscus_sinensis
ENSLBEG00000010933	-	89	53.271	ENSPSIG00000000839	-	69	57.724	Pelodiscus_sinensis
ENSLBEG00000010933	-	74	62.185	ENSPMGG00000013191	hic2	67	57.664	Periophthalmus_magnuspinnatus
ENSLBEG00000010933	-	79	59.091	ENSPCIG00000026758	HIC2	66	52.558	Phascolarctos_cinereus
ENSLBEG00000010933	-	93	41.397	ENSPFOG00000020465	hic2	62	58.394	Poecilia_formosa
ENSLBEG00000010933	-	93	41.397	ENSPLAG00000014754	hic2	62	58.394	Poecilia_latipinna
ENSLBEG00000010933	-	93	41.397	ENSPMEG00000020119	hic2	62	58.394	Poecilia_mexicana
ENSLBEG00000010933	-	93	41.056	ENSPREG00000010443	hic2	62	58.394	Poecilia_reticulata
ENSLBEG00000010933	-	72	59.322	ENSPPYG00000012022	HIC2	63	52.968	Pongo_abelii
ENSLBEG00000010933	-	83	58.201	ENSPCAG00000015907	HIC2	64	53.917	Procavia_capensis
ENSLBEG00000010933	-	79	53.302	ENSPCOG00000013219	HIC2	67	53.302	Propithecus_coquereli
ENSLBEG00000010933	-	93	41.667	ENSPNYG00000007402	hic2	62	59.124	Pundamilia_nyererei
ENSLBEG00000010933	-	93	38.252	ENSPNAG00000022553	hic1l	57	60.927	Pygocentrus_nattereri
ENSLBEG00000010933	-	93	41.135	ENSPNAG00000002230	hic2	64	56.923	Pygocentrus_nattereri
ENSLBEG00000010933	-	76	53.403	ENSRNOG00000051458	Hic2	63	55.769	Rattus_norvegicus
ENSLBEG00000010933	-	72	59.322	ENSRBIG00000031113	HIC2	54	59.322	Rhinopithecus_bieti
ENSLBEG00000010933	-	72	59.322	ENSRROG00000035179	HIC2	63	52.968	Rhinopithecus_roxellana
ENSLBEG00000010933	-	72	59.322	ENSSBOG00000026991	HIC2	67	52.968	Saimiri_boliviensis_boliviensis
ENSLBEG00000010933	-	93	39.964	ENSSFOG00015016070	-	98	56.281	Scleropages_formosus
ENSLBEG00000010933	-	93	40.378	ENSSFOG00015015304	hic2	66	52.632	Scleropages_formosus
ENSLBEG00000010933	-	93	41.379	ENSSMAG00000007076	hic2	68	53.953	Scophthalmus_maximus
ENSLBEG00000010933	-	93	41.438	ENSSDUG00000022819	hic2	70	51.982	Seriola_dumerili
ENSLBEG00000010933	-	93	41.368	ENSSLDG00000003123	hic2	70	51.754	Seriola_lalandi_dorsalis
ENSLBEG00000010933	-	93	41.468	ENSSPAG00000008074	hic2	70	50.862	Stegastes_partitus
ENSLBEG00000010933	-	83	58.564	ENSSSCG00000036472	HIC2	64	57.360	Sus_scrofa
ENSLBEG00000010933	-	73	57.724	ENSTGUG00000008699	HIC2	67	54.327	Taeniopygia_guttata
ENSLBEG00000010933	-	93	40.702	ENSTRUG00000013139	hic2	59	62.185	Takifugu_rubripes
ENSLBEG00000010933	-	93	43.304	ENSTNIG00000001094	hic2	93	44.072	Tetraodon_nigroviridis
ENSLBEG00000010933	-	81	61.236	ENSUAMG00000010428	HIC2	65	54.902	Ursus_americanus
ENSLBEG00000010933	-	64	61.236	ENSUMAG00000003594	HIC2	56	58.407	Ursus_maritimus
ENSLBEG00000010933	-	81	61.236	ENSVVUG00000020688	HIC2	67	54.167	Vulpes_vulpes
ENSLBEG00000010933	-	65	59.412	ENSXETG00000022419	hic2	55	58.475	Xenopus_tropicalis
ENSLBEG00000010933	-	93	41.738	ENSXCOG00000001544	hic2	62	58.394	Xiphophorus_couchianus
ENSLBEG00000010933	-	93	41.738	ENSXMAG00000020311	hic2	62	58.394	Xiphophorus_maculatus