EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011006 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF57.1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 2731 bases
Position: chrFKLU01000150.1:399293-402023
Accession: 109989001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014158	zf-C2H2	PF00096.26	1.5e-17	1	3
ENSLBEP00000014158	zf-C2H2	PF00096.26	1.5e-17	2	3
ENSLBEP00000014158	zf-C2H2	PF00096.26	1.5e-17	3	3
ENSLBEP00000014158	zf-met	PF12874.7	9.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000014978	-	1416	XM_020640602	ENSLBEP00000014158	471 (aa)	XP_020496258	-

Gene Model

Click here to download ENSLBEG00000011006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011006	-	51	44.144	ENSLBEG00000001132	-	79	44.144
ENSLBEG00000011006	-	62	38.043	ENSLBEG00000026552	-	93	38.043
ENSLBEG00000011006	-	63	37.037	ENSLBEG00000016562	znf646	63	37.037
ENSLBEG00000011006	-	50	44.643	ENSLBEG00000028243	-	81	44.643
ENSLBEG00000011006	-	55	35.470	ENSLBEG00000008439	znf319b	85	35.470
ENSLBEG00000011006	-	60	46.491	ENSLBEG00000026457	-	93	51.667
ENSLBEG00000011006	-	98	41.935	ENSLBEG00000020461	-	99	41.935
ENSLBEG00000011006	-	75	34.091	ENSLBEG00000012201	-	76	35.938
ENSLBEG00000011006	-	50	38.462	ENSLBEG00000018509	-	88	38.462
ENSLBEG00000011006	-	55	33.574	ENSLBEG00000012438	ZNF319	93	40.625
ENSLBEG00000011006	-	69	52.083	ENSLBEG00000007937	-	89	52.083
ENSLBEG00000011006	-	50	46.429	ENSLBEG00000007106	-	67	46.429
ENSLBEG00000011006	-	80	41.623	ENSLBEG00000000343	-	99	42.147
ENSLBEG00000011006	-	78	44.444	ENSLBEG00000002357	-	97	42.667
ENSLBEG00000011006	-	86	53.409	ENSLBEG00000002278	-	88	44.199
ENSLBEG00000011006	-	51	47.619	ENSLBEG00000017450	-	80	47.619
ENSLBEG00000011006	-	64	44.828	ENSLBEG00000011465	-	99	40.458
ENSLBEG00000011006	-	64	41.538	ENSLBEG00000008320	-	67	38.400
ENSLBEG00000011006	-	58	44.068	ENSLBEG00000024451	-	52	44.068
ENSLBEG00000011006	-	59	34.444	ENSLBEG00000005715	-	82	34.444
ENSLBEG00000011006	-	81	45.977	ENSLBEG00000015694	-	97	45.977
ENSLBEG00000011006	-	53	49.351	ENSLBEG00000011588	-	60	49.351
ENSLBEG00000011006	-	78	41.256	ENSLBEG00000000369	-	99	39.904
ENSLBEG00000011006	-	50	40.212	ENSLBEG00000017726	-	75	41.270
ENSLBEG00000011006	-	53	40.541	ENSLBEG00000020297	gfi1b	67	35.652
ENSLBEG00000011006	-	79	46.296	ENSLBEG00000010132	-	97	46.296
ENSLBEG00000011006	-	68	46.429	ENSLBEG00000009580	-	77	39.130
ENSLBEG00000011006	-	84	44.492	ENSLBEG00000011349	-	82	44.492
ENSLBEG00000011006	-	83	63.366	ENSLBEG00000010278	-	95	68.243
ENSLBEG00000011006	-	99	51.351	ENSLBEG00000014263	-	99	51.351
ENSLBEG00000011006	-	84	44.175	ENSLBEG00000000373	-	95	44.330
ENSLBEG00000011006	-	84	40.000	ENSLBEG00000011313	-	97	45.854
ENSLBEG00000011006	-	82	40.870	ENSLBEG00000013570	-	97	43.750
ENSLBEG00000011006	-	83	50.746	ENSLBEG00000011250	-	98	50.500
ENSLBEG00000011006	-	94	38.202	ENSLBEG00000011210	-	83	36.653
ENSLBEG00000011006	-	52	47.273	ENSLBEG00000010165	-	90	37.815
ENSLBEG00000011006	-	66	31.944	ENSLBEG00000022736	prdm5	74	31.915
ENSLBEG00000011006	-	50	34.426	ENSLBEG00000000972	snai2	55	34.426
ENSLBEG00000011006	-	58	42.381	ENSLBEG00000025696	-	83	36.842
ENSLBEG00000011006	-	63	47.191	ENSLBEG00000024536	-	93	47.191
ENSLBEG00000011006	-	97	44.554	ENSLBEG00000008733	-	97	44.554
ENSLBEG00000011006	-	84	54.054	ENSLBEG00000011289	-	86	54.054
ENSLBEG00000011006	-	79	34.109	ENSLBEG00000008115	-	90	45.312
ENSLBEG00000011006	-	57	43.750	ENSLBEG00000005307	znf236	56	43.750
ENSLBEG00000011006	-	74	44.802	ENSLBEG00000011028	-	98	47.238
ENSLBEG00000011006	-	81	37.931	ENSLBEG00000019067	zbtb47b	54	37.931
ENSLBEG00000011006	-	82	35.795	ENSLBEG00000026019	-	79	35.795
ENSLBEG00000011006	-	76	73.006	ENSLBEG00000006161	-	91	73.006
ENSLBEG00000011006	-	80	40.994	ENSLBEG00000008606	-	96	40.994
ENSLBEG00000011006	-	63	38.674	ENSLBEG00000007251	-	94	39.262
ENSLBEG00000011006	-	50	37.931	ENSLBEG00000020747	-	88	37.931
ENSLBEG00000011006	-	54	38.384	ENSLBEG00000008689	-	83	38.384
ENSLBEG00000011006	-	58	36.667	ENSLBEG00000005729	znf652	84	34.711
ENSLBEG00000011006	-	99	48.214	ENSLBEG00000011040	-	86	48.214
ENSLBEG00000011006	-	50	35.586	ENSLBEG00000013235	-	79	37.500
ENSLBEG00000011006	-	59	45.000	ENSLBEG00000007837	-	94	45.000
ENSLBEG00000011006	-	50	52.727	ENSLBEG00000024458	-	76	52.727
ENSLBEG00000011006	-	50	37.179	ENSLBEG00000028271	-	72	38.372
ENSLBEG00000011006	-	91	48.515	ENSLBEG00000009567	-	95	48.515
ENSLBEG00000011006	-	53	44.872	ENSLBEG00000024509	-	97	44.907
ENSLBEG00000011006	-	52	39.726	ENSLBEG00000000435	-	73	39.726
ENSLBEG00000011006	-	80	40.284	ENSLBEG00000014211	-	97	44.681
ENSLBEG00000011006	-	64	39.604	ENSLBEG00000004892	-	100	39.604
ENSLBEG00000011006	-	84	54.955	ENSLBEG00000004867	-	95	41.758
ENSLBEG00000011006	-	64	41.538	ENSLBEG00000014527	-	54	40.625
ENSLBEG00000011006	-	51	40.351	ENSLBEG00000001920	-	86	37.580
ENSLBEG00000011006	-	63	40.063	ENSLBEG00000004833	-	87	41.905
ENSLBEG00000011006	-	84	38.955	ENSLBEG00000025689	-	88	39.130
ENSLBEG00000011006	-	50	50.926	ENSLBEG00000001756	-	99	36.478
ENSLBEG00000011006	-	55	39.785	ENSLBEG00000020128	-	97	54.098
ENSLBEG00000011006	-	68	39.600	ENSLBEG00000018970	-	93	40.244
ENSLBEG00000011006	-	69	42.466	ENSLBEG00000011145	si:cabz01071911.3	95	42.566
ENSLBEG00000011006	-	73	55.556	ENSLBEG00000024737	-	99	41.803
ENSLBEG00000011006	-	79	44.615	ENSLBEG00000014282	-	97	44.615
ENSLBEG00000011006	-	50	34.842	ENSLBEG00000015264	-	75	34.842
ENSLBEG00000011006	-	81	38.710	ENSLBEG00000004805	-	99	36.041
ENSLBEG00000011006	-	51	36.232	ENSLBEG00000011986	-	81	36.232
ENSLBEG00000011006	-	84	41.989	ENSLBEG00000000393	-	94	49.550
ENSLBEG00000011006	-	51	32.218	ENSLBEG00000025305	-	87	32.218
ENSLBEG00000011006	-	50	54.545	ENSLBEG00000006924	-	99	52.459
ENSLBEG00000011006	-	51	44.397	ENSLBEG00000011091	si:cabz01071911.3	97	44.397
ENSLBEG00000011006	-	99	39.227	ENSLBEG00000008850	-	100	39.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011006	-	83	40.179	ENSAPOG00000000128	-	94	40.179	Acanthochromis_polyacanthus
ENSLBEG00000011006	-	98	37.073	ENSAPOG00000021496	-	94	37.073	Acanthochromis_polyacanthus
ENSLBEG00000011006	-	81	43.548	ENSAPEG00000011635	-	87	43.548	Amphiprion_percula
ENSLBEG00000011006	-	98	36.585	ENSAPEG00000010478	-	94	36.585	Amphiprion_percula
ENSLBEG00000011006	-	80	42.819	ENSATEG00000011235	-	90	42.819	Anabas_testudineus
ENSLBEG00000011006	-	99	51.667	ENSATEG00000011202	-	90	51.667	Anabas_testudineus
ENSLBEG00000011006	-	98	33.929	ENSATEG00000024549	-	97	33.333	Anabas_testudineus
ENSLBEG00000011006	-	50	39.891	ENSATEG00000015828	-	64	39.891	Anabas_testudineus
ENSLBEG00000011006	-	50	35.028	ENSATEG00000024551	-	66	35.028	Anabas_testudineus
ENSLBEG00000011006	-	53	43.820	ENSAMXG00000035090	-	53	43.820	Astyanax_mexicanus
ENSLBEG00000011006	-	54	36.275	ENSCVAG00000003630	-	74	36.709	Cyprinodon_variegatus
ENSLBEG00000011006	-	99	38.974	ENSCVAG00000004508	-	99	38.974	Cyprinodon_variegatus
ENSLBEG00000011006	-	99	38.122	ENSELUG00000008171	-	99	34.227	Esox_lucius
ENSLBEG00000011006	-	79	41.964	ENSFHEG00000020050	-	52	41.964	Fundulus_heteroclitus
ENSLBEG00000011006	-	52	37.179	ENSHBUG00000000731	-	58	37.179	Haplochromis_burtoni
ENSLBEG00000011006	-	85	36.538	ENSHBUG00000002878	-	85	30.184	Haplochromis_burtoni
ENSLBEG00000011006	-	79	37.607	ENSHCOG00000008205	-	80	37.607	Hippocampus_comes
ENSLBEG00000011006	-	97	40.217	ENSIPUG00000024007	-	98	40.217	Ictalurus_punctatus
ENSLBEG00000011006	-	78	38.053	ENSKMAG00000019912	-	94	38.053	Kryptolebias_marmoratus
ENSLBEG00000011006	-	65	41.772	ENSKMAG00000000539	-	100	41.593	Kryptolebias_marmoratus
ENSLBEG00000011006	-	82	42.308	ENSMAMG00000022152	-	90	41.085	Mastacembelus_armatus
ENSLBEG00000011006	-	83	42.735	ENSMZEG00005008312	-	64	42.735	Maylandia_zebra
ENSLBEG00000011006	-	52	37.179	ENSMZEG00005004047	-	58	37.179	Maylandia_zebra
ENSLBEG00000011006	-	99	38.462	ENSNBRG00000013838	-	99	38.462	Neolamprologus_brichardi
ENSLBEG00000011006	-	50	42.857	ENSNBRG00000004381	-	76	42.857	Neolamprologus_brichardi
ENSLBEG00000011006	-	84	39.355	ENSNBRG00000024051	-	77	39.355	Neolamprologus_brichardi
ENSLBEG00000011006	-	88	39.062	ENSORLG00000025719	-	98	34.254	Oryzias_latipes
ENSLBEG00000011006	-	50	44.048	ENSORLG00020009554	-	75	44.578	Oryzias_latipes_hni
ENSLBEG00000011006	-	89	39.062	ENSORLG00015012599	-	98	34.254	Oryzias_latipes_hsok
ENSLBEG00000011006	-	50	41.341	ENSOMEG00000015640	-	72	41.341	Oryzias_melastigma
ENSLBEG00000011006	-	99	40.000	ENSOMEG00000010906	-	99	40.000	Oryzias_melastigma
ENSLBEG00000011006	-	98	41.964	ENSPFOG00000012948	-	95	41.964	Poecilia_formosa
ENSLBEG00000011006	-	84	45.946	ENSPLAG00000009651	-	88	47.761	Poecilia_latipinna
ENSLBEG00000011006	-	69	41.216	ENSPMEG00000023113	-	87	41.216	Poecilia_mexicana
ENSLBEG00000011006	-	99	40.323	ENSPREG00000018011	-	96	40.323	Poecilia_reticulata
ENSLBEG00000011006	-	99	48.333	ENSPREG00000004006	-	100	44.944	Poecilia_reticulata
ENSLBEG00000011006	-	85	42.541	ENSPREG00000016270	-	89	38.217	Poecilia_reticulata
ENSLBEG00000011006	-	52	41.964	ENSPREG00000000853	-	61	41.964	Poecilia_reticulata
ENSLBEG00000011006	-	61	41.593	ENSPNYG00000023882	-	94	50.000	Pundamilia_nyererei
ENSLBEG00000011006	-	85	38.065	ENSPNYG00000019187	-	94	47.321	Pundamilia_nyererei
ENSLBEG00000011006	-	50	43.802	ENSPNAG00000010317	-	81	43.802	Pygocentrus_nattereri
ENSLBEG00000011006	-	60	53.261	ENSSLDG00000007568	-	88	53.261	Seriola_lalandi_dorsalis
ENSLBEG00000011006	-	98	37.778	ENSSPAG00000010524	-	96	37.778	Stegastes_partitus
ENSLBEG00000011006	-	84	46.218	ENSSPAG00000021950	-	91	37.288	Stegastes_partitus
ENSLBEG00000011006	-	75	42.188	ENSSPAG00000021940	-	62	42.188	Stegastes_partitus
ENSLBEG00000011006	-	51	43.304	ENSXETG00000002690	-	55	43.304	Xenopus_tropicalis