EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011011 (Gene tree)
Gene ID: 109983752
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 98779 bases
Position: chrFKLU01000060.1:639005-737783
Accession: 109983752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014153	RRM_1	PF00076.22	1.1e-10	1	1
ENSLBEP00000014164	RRM_1	PF00076.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000014983	-	1041	XM_020633596	ENSLBEP00000014164	291 (aa)	XP_020489252	UPI0009B383D9
ENSLBET00000014972	-	1350	XM_020633595	ENSLBEP00000014153	291 (aa)	XP_020489251	UPI0009B383D9

Gene Model

Click here to download ENSLBEG00000011011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011011	-	74	60.185	ENSLBEG00000022656	raly	81	61.574
ENSLBEG00000011011	-	100	73.311	ENSLBEG00000012873	-	100	72.635
ENSLBEG00000011011	-	73	54.585	ENSLBEG00000024418	-	93	46.309
ENSLBEG00000011011	-	72	58.257	ENSLBEG00000006979	-	93	48.084
ENSLBEG00000011011	-	73	57.991	ENSLBEG00000006193	-	84	52.113

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011011	-	100	73.311	ENSAPOG00000008744	-	100	72.635	Acanthochromis_polyacanthus
ENSLBEG00000011011	-	97	66.897	ENSACIG00000007143	-	97	66.897	Amphilophus_citrinellus
ENSLBEG00000011011	-	100	92.833	ENSAOCG00000001605	-	100	92.491	Amphiprion_ocellaris
ENSLBEG00000011011	-	100	72.973	ENSAOCG00000023599	-	100	72.727	Amphiprion_ocellaris
ENSLBEG00000011011	-	97	65.772	ENSATEG00000022219	-	93	69.231	Anabas_testudineus
ENSLBEG00000011011	-	77	92.444	ENSATEG00000023356	-	87	92.000	Anabas_testudineus
ENSLBEG00000011011	-	100	73.220	ENSACLG00000011720	-	100	72.203	Astatotilapia_calliptera
ENSLBEG00000011011	-	100	96.233	ENSACLG00000006949	-	100	95.205	Astatotilapia_calliptera
ENSLBEG00000011011	-	100	64.189	ENSAMXG00000032617	-	100	64.189	Astyanax_mexicanus
ENSLBEG00000011011	-	100	89.726	ENSAMXG00000019031	-	100	90.068	Astyanax_mexicanus
ENSLBEG00000011011	-	100	67.905	ENSCSEG00000014237	-	100	68.013	Cynoglossus_semilaevis
ENSLBEG00000011011	-	100	90.816	ENSCVAG00000018104	-	100	91.156	Cyprinodon_variegatus
ENSLBEG00000011011	-	100	71.959	ENSCVAG00000013624	-	100	72.054	Cyprinodon_variegatus
ENSLBEG00000011011	-	59	77.193	ENSDARG00000090292	ralyl	81	79.012	Danio_rerio
ENSLBEG00000011011	-	94	74.286	ENSELUG00000001702	-	97	76.071	Esox_lucius
ENSLBEG00000011011	-	57	78.788	ENSGMOG00000005914	-	100	78.788	Gadus_morhua
ENSLBEG00000011011	-	59	91.908	ENSGACG00000004991	-	91	94.578	Gasterosteus_aculeatus
ENSLBEG00000011011	-	100	96.233	ENSHBUG00000015412	-	100	95.205	Haplochromis_burtoni
ENSLBEG00000011011	-	100	72.973	ENSHBUG00000010040	-	100	72.727	Haplochromis_burtoni
ENSLBEG00000011011	-	100	87.372	ENSIPUG00000000507	ralyl	100	88.737	Ictalurus_punctatus
ENSLBEG00000011011	-	100	91.809	ENSKMAG00000018155	-	100	91.468	Kryptolebias_marmoratus
ENSLBEG00000011011	-	100	69.595	ENSKMAG00000022093	-	100	70.370	Kryptolebias_marmoratus
ENSLBEG00000011011	-	100	82.818	ENSLOCG00000012787	ralyl	99	82.131	Lepisosteus_oculatus
ENSLBEG00000011011	-	99	70.588	ENSMAMG00000001723	-	97	69.896	Mastacembelus_armatus
ENSLBEG00000011011	-	98	89.655	ENSMZEG00005018748	-	99	89.655	Maylandia_zebra
ENSLBEG00000011011	-	100	73.220	ENSMZEG00005024447	-	100	72.203	Maylandia_zebra
ENSLBEG00000011011	-	97	65.667	ENSMMOG00000020441	-	86	68.000	Mola_mola
ENSLBEG00000011011	-	100	92.150	ENSMALG00000012952	-	100	91.809	Monopterus_albus
ENSLBEG00000011011	-	100	73.311	ENSMALG00000019019	-	78	73.064	Monopterus_albus
ENSLBEG00000011011	-	97	67.586	ENSNBRG00000011206	-	97	67.586	Neolamprologus_brichardi
ENSLBEG00000011011	-	98	89.726	ENSNBRG00000011376	-	99	89.384	Neolamprologus_brichardi
ENSLBEG00000011011	-	100	71.959	ENSORLG00000017934	-	100	71.284	Oryzias_latipes
ENSLBEG00000011011	-	100	93.857	ENSORLG00000012719	-	100	93.515	Oryzias_latipes
ENSLBEG00000011011	-	100	93.857	ENSORLG00020004438	-	100	93.515	Oryzias_latipes_hni
ENSLBEG00000011011	-	100	70.946	ENSORLG00020000082	-	100	71.284	Oryzias_latipes_hni
ENSLBEG00000011011	-	100	71.959	ENSORLG00015004280	-	100	71.284	Oryzias_latipes_hsok
ENSLBEG00000011011	-	100	93.857	ENSORLG00015004727	-	100	93.515	Oryzias_latipes_hsok
ENSLBEG00000011011	-	100	71.284	ENSOMEG00000011821	-	100	71.284	Oryzias_melastigma
ENSLBEG00000011011	-	100	93.515	ENSOMEG00000001170	-	100	93.174	Oryzias_melastigma
ENSLBEG00000011011	-	100	78.840	ENSPKIG00000015926	-	100	78.840	Paramormyrops_kingsleyae
ENSLBEG00000011011	-	80	79.237	ENSPMGG00000014481	-	98	81.013	Periophthalmus_magnuspinnatus
ENSLBEG00000011011	-	99	67.458	ENSPMGG00000009532	-	99	67.458	Periophthalmus_magnuspinnatus
ENSLBEG00000011011	-	97	68.896	ENSPFOG00000006120	-	99	68.439	Poecilia_formosa
ENSLBEG00000011011	-	97	92.334	ENSPLAG00000011323	ralyl	100	91.986	Poecilia_latipinna
ENSLBEG00000011011	-	97	64.706	ENSPLAG00000009877	-	76	64.261	Poecilia_latipinna
ENSLBEG00000011011	-	97	64.706	ENSPMEG00000013624	-	80	64.261	Poecilia_mexicana
ENSLBEG00000011011	-	97	92.334	ENSPMEG00000023847	ralyl	100	91.986	Poecilia_mexicana
ENSLBEG00000011011	-	97	71.429	ENSPREG00000013805	-	100	66.772	Poecilia_reticulata
ENSLBEG00000011011	-	97	91.579	ENSPREG00000001956	ralyl	100	91.579	Poecilia_reticulata
ENSLBEG00000011011	-	97	67.586	ENSPNYG00000008772	-	97	67.586	Pundamilia_nyererei
ENSLBEG00000011011	-	98	89.655	ENSPNYG00000003548	-	99	89.655	Pundamilia_nyererei
ENSLBEG00000011011	-	100	88.356	ENSPNAG00000000498	-	88	88.699	Pygocentrus_nattereri
ENSLBEG00000011011	-	100	66.667	ENSPNAG00000026098	-	100	66.667	Pygocentrus_nattereri
ENSLBEG00000011011	-	100	85.763	ENSSFOG00015009401	-	100	85.085	Scleropages_formosus
ENSLBEG00000011011	-	100	69.759	ENSSFOG00015004575	-	96	75.177	Scleropages_formosus
ENSLBEG00000011011	-	100	94.178	ENSSMAG00000005608	-	100	93.151	Scophthalmus_maximus
ENSLBEG00000011011	-	97	70.070	ENSSMAG00000015907	-	93	70.423	Scophthalmus_maximus
ENSLBEG00000011011	-	100	94.198	ENSSDUG00000007587	-	100	93.857	Seriola_dumerili
ENSLBEG00000011011	-	100	72.973	ENSSDUG00000012473	-	100	71.622	Seriola_dumerili
ENSLBEG00000011011	-	100	72.635	ENSSLDG00000011534	-	100	71.284	Seriola_lalandi_dorsalis
ENSLBEG00000011011	-	100	96.246	ENSSLDG00000020603	-	100	96.246	Seriola_lalandi_dorsalis
ENSLBEG00000011011	-	97	63.830	ENSSPAG00000013858	-	96	62.199	Stegastes_partitus
ENSLBEG00000011011	-	82	76.050	ENSTRUG00000003829	-	95	71.277	Takifugu_rubripes
ENSLBEG00000011011	-	97	67.577	ENSTNIG00000005594	-	99	67.577	Tetraodon_nigroviridis
ENSLBEG00000011011	-	100	70.307	ENSXETG00000017729	ralyl	99	70.307	Xenopus_tropicalis
ENSLBEG00000011011	-	97	89.492	ENSXCOG00000015156	-	93	89.153	Xiphophorus_couchianus
ENSLBEG00000011011	-	100	72.297	ENSXMAG00000007614	-	100	72.054	Xiphophorus_maculatus
ENSLBEG00000011011	-	100	93.515	ENSXMAG00000008396	-	100	93.174	Xiphophorus_maculatus