EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011040 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 12757 bases
Position: chrFKLU01000150.1:411974-424730
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014212	zf-C2H2	PF00096.26	1.7e-20	1	4
ENSLBEP00000014212	zf-C2H2	PF00096.26	1.7e-20	2	4
ENSLBEP00000014212	zf-C2H2	PF00096.26	1.7e-20	3	4
ENSLBEP00000014212	zf-C2H2	PF00096.26	1.7e-20	4	4
ENSLBEP00000014212	zf-met	PF12874.7	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000015040	-	1089	-	ENSLBEP00000014212	362 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000011040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011040	-	83	34.951	ENSLBEG00000001920	-	87	45.455
ENSLBEG00000011040	-	52	44.882	ENSLBEG00000005307	znf236	57	44.882
ENSLBEG00000011040	-	56	44.138	ENSLBEG00000006603	gfi1aa	59	44.138
ENSLBEG00000011040	-	53	43.182	ENSLBEG00000013235	-	90	43.182
ENSLBEG00000011040	-	54	39.869	ENSLBEG00000022736	prdm5	77	39.869
ENSLBEG00000011040	-	70	71.429	ENSLBEG00000010278	-	95	64.706
ENSLBEG00000011040	-	61	54.795	ENSLBEG00000004867	-	92	54.795
ENSLBEG00000011040	-	57	51.807	ENSLBEG00000001756	-	95	51.807
ENSLBEG00000011040	-	71	40.196	ENSLBEG00000000435	-	79	43.353
ENSLBEG00000011040	-	50	52.941	ENSLBEG00000011349	-	86	51.634
ENSLBEG00000011040	-	65	51.282	ENSLBEG00000021260	-	97	51.282
ENSLBEG00000011040	-	68	36.283	ENSLBEG00000010132	-	91	36.283
ENSLBEG00000011040	-	59	48.966	ENSLBEG00000024509	-	97	50.932
ENSLBEG00000011040	-	52	44.805	ENSLBEG00000017450	-	83	46.203
ENSLBEG00000011040	-	60	48.718	ENSLBEG00000011145	si:cabz01071911.3	95	50.318
ENSLBEG00000011040	-	57	51.724	ENSLBEG00000025696	-	61	51.724
ENSLBEG00000011040	-	53	46.154	ENSLBEG00000007837	-	81	46.154
ENSLBEG00000011040	-	53	41.667	ENSLBEG00000028243	-	81	43.662
ENSLBEG00000011040	-	57	51.579	ENSLBEG00000010165	-	90	47.368
ENSLBEG00000011040	-	57	46.104	ENSLBEG00000014282	-	84	46.104
ENSLBEG00000011040	-	63	52.740	ENSLBEG00000002357	-	98	52.740
ENSLBEG00000011040	-	64	50.633	ENSLBEG00000000343	-	95	50.323
ENSLBEG00000011040	-	67	50.000	ENSLBEG00000011465	-	93	50.625
ENSLBEG00000011040	-	86	38.961	ENSLBEG00000008850	-	99	38.961
ENSLBEG00000011040	-	86	33.754	ENSLBEG00000013570	-	99	44.805
ENSLBEG00000011040	-	62	44.654	ENSLBEG00000015694	-	97	44.654
ENSLBEG00000011040	-	70	46.259	ENSLBEG00000011250	-	91	50.685
ENSLBEG00000011040	-	85	50.000	ENSLBEG00000011210	-	84	50.000
ENSLBEG00000011040	-	86	50.000	ENSLBEG00000008733	-	97	50.000
ENSLBEG00000011040	-	59	41.322	ENSLBEG00000016562	znf646	58	41.322
ENSLBEG00000011040	-	52	43.357	ENSLBEG00000011986	-	90	43.357
ENSLBEG00000011040	-	51	46.032	ENSLBEG00000005729	znf652	84	46.032
ENSLBEG00000011040	-	71	49.275	ENSLBEG00000012201	-	83	49.275
ENSLBEG00000011040	-	54	50.943	ENSLBEG00000004805	-	98	50.943
ENSLBEG00000011040	-	50	31.373	ENSLBEG00000014195	-	65	31.373
ENSLBEG00000011040	-	66	47.973	ENSLBEG00000011289	-	85	47.973
ENSLBEG00000011040	-	61	48.428	ENSLBEG00000004892	-	89	48.428
ENSLBEG00000011040	-	68	54.255	ENSLBEG00000002278	-	88	50.000
ENSLBEG00000011040	-	68	50.794	ENSLBEG00000024737	-	99	50.000
ENSLBEG00000011040	-	67	46.207	ENSLBEG00000000369	-	95	46.207
ENSLBEG00000011040	-	52	35.870	ENSLBEG00000022939	-	61	33.163
ENSLBEG00000011040	-	83	48.701	ENSLBEG00000025689	-	90	48.701
ENSLBEG00000011040	-	63	46.259	ENSLBEG00000026457	-	99	48.214
ENSLBEG00000011040	-	68	44.444	ENSLBEG00000008320	-	65	37.931
ENSLBEG00000011040	-	67	49.296	ENSLBEG00000011028	-	98	50.314
ENSLBEG00000011040	-	60	47.727	ENSLBEG00000007937	-	96	47.727
ENSLBEG00000011040	-	50	41.549	ENSLBEG00000018509	-	89	41.549
ENSLBEG00000011040	-	70	47.967	ENSLBEG00000000393	-	85	47.967
ENSLBEG00000011040	-	56	42.282	ENSLBEG00000017726	-	89	41.558
ENSLBEG00000011040	-	65	50.331	ENSLBEG00000018970	-	84	50.331
ENSLBEG00000011040	-	53	41.667	ENSLBEG00000008689	-	96	42.857
ENSLBEG00000011040	-	53	42.949	ENSLBEG00000015264	-	79	42.949
ENSLBEG00000011040	-	65	53.595	ENSLBEG00000000373	-	91	53.595
ENSLBEG00000011040	-	68	43.443	ENSLBEG00000014211	-	98	45.098
ENSLBEG00000011040	-	65	41.667	ENSLBEG00000012438	ZNF319	90	41.667
ENSLBEG00000011040	-	54	45.652	ENSLBEG00000024458	-	82	45.652
ENSLBEG00000011040	-	59	36.478	ENSLBEG00000028271	-	90	37.423
ENSLBEG00000011040	-	56	50.610	ENSLBEG00000004833	-	99	50.610
ENSLBEG00000011040	-	63	41.176	ENSLBEG00000019067	zbtb47b	62	40.000
ENSLBEG00000011040	-	55	30.660	ENSLBEG00000014676	-	55	30.660
ENSLBEG00000011040	-	65	47.904	ENSLBEG00000011313	-	81	47.904
ENSLBEG00000011040	-	52	34.532	ENSLBEG00000013197	PRDM15	51	34.532
ENSLBEG00000011040	-	59	51.754	ENSLBEG00000009580	-	84	51.754
ENSLBEG00000011040	-	86	48.214	ENSLBEG00000011006	-	99	48.214
ENSLBEG00000011040	-	86	41.880	ENSLBEG00000014263	-	99	41.880
ENSLBEG00000011040	-	66	50.000	ENSLBEG00000009567	-	89	37.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011040	-	62	47.260	ENSACIG00000017013	-	58	47.260	Amphilophus_citrinellus
ENSLBEG00000011040	-	84	39.595	ENSHCOG00000001292	-	91	40.237	Hippocampus_comes
ENSLBEG00000011040	-	52	46.000	ENSHCOG00000014786	-	99	46.000	Hippocampus_comes
ENSLBEG00000011040	-	54	49.032	ENSIPUG00000015601	-	69	49.032	Ictalurus_punctatus
ENSLBEG00000011040	-	51	50.000	ENSORLG00020001707	-	80	50.000	Oryzias_latipes_hni
ENSLBEG00000011040	-	55	52.577	ENSPFOG00000024567	-	100	52.577	Poecilia_formosa
ENSLBEG00000011040	-	61	47.619	ENSPMEG00000016762	-	98	47.619	Poecilia_mexicana
ENSLBEG00000011040	-	51	50.968	ENSPNAG00000018409	-	96	50.968	Pygocentrus_nattereri