EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011107 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 10159 bases
Position: chrFKLU01004893.1:1875-12033
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014327	Tudor-knot	PF11717.8	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000015169	-	1335	-	ENSLBEP00000014327	444 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000011107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011107	-	89	45.500	ENSLBEG00000007401	kat8	78	45.500
ENSLBEG00000011107	-	100	100.000	ENSLBEG00000024629	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011107	-	97	95.846	ENSAPOG00000016436	kat5b	100	87.712	Acanthochromis_polyacanthus
ENSLBEG00000011107	-	95	91.333	ENSACIG00000010425	kat5b	99	91.333	Amphilophus_citrinellus
ENSLBEG00000011107	-	93	98.746	ENSAOCG00000014287	kat5b	82	95.846	Amphiprion_ocellaris
ENSLBEG00000011107	-	93	98.746	ENSAPEG00000001944	kat5b	76	98.746	Amphiprion_percula
ENSLBEG00000011107	-	95	92.473	ENSATEG00000016047	kat5b	82	92.473	Anabas_testudineus
ENSLBEG00000011107	-	95	95.846	ENSACLG00000015105	kat5b	81	95.846	Astatotilapia_calliptera
ENSLBEG00000011107	-	98	96.914	ENSAMXG00000009091	kat5b	90	92.486	Astyanax_mexicanus
ENSLBEG00000011107	-	94	53.256	WBGene00007029	mys-1	93	53.256	Caenorhabditis_elegans
ENSLBEG00000011107	-	95	73.926	ENSCSAVG00000004784	-	100	67.053	Ciona_savignyi
ENSLBEG00000011107	-	94	97.812	ENSCSEG00000014541	kat5b	100	92.627	Cynoglossus_semilaevis
ENSLBEG00000011107	-	95	95.549	ENSCVAG00000012685	kat5b	79	95.549	Cyprinodon_variegatus
ENSLBEG00000011107	-	93	96.285	ENSDARG00000004587	kat5b	80	96.285	Danio_rerio
ENSLBEG00000011107	-	92	96.238	ENSDARG00000045951	kat5b	76	96.238	Danio_rerio
ENSLBEG00000011107	-	92	76.324	FBgn0026080	Tip60	92	78.000	Drosophila_melanogaster
ENSLBEG00000011107	-	62	90.710	ENSEBUG00000001775	kat5b	99	63.587	Eptatretus_burgeri
ENSLBEG00000011107	-	98	98.433	ENSELUG00000016941	kat5b	99	89.183	Esox_lucius
ENSLBEG00000011107	-	95	92.553	ENSFHEG00000003516	kat5b	80	92.553	Fundulus_heteroclitus
ENSLBEG00000011107	-	93	98.746	ENSGAFG00000004081	kat5b	100	85.588	Gambusia_affinis
ENSLBEG00000011107	-	95	96.774	ENSGACG00000020408	kat5b	100	86.624	Gasterosteus_aculeatus
ENSLBEG00000011107	-	93	98.746	ENSHBUG00000023213	kat5b	99	90.022	Haplochromis_burtoni
ENSLBEG00000011107	-	93	98.746	ENSHCOG00000002064	kat5b	82	95.846	Hippocampus_comes
ENSLBEG00000011107	-	94	92.396	ENSIPUG00000014489	kat5b	99	92.396	Ictalurus_punctatus
ENSLBEG00000011107	-	95	92.553	ENSKMAG00000009020	kat5b	80	92.473	Kryptolebias_marmoratus
ENSLBEG00000011107	-	93	99.060	ENSMAMG00000016643	kat5b	100	86.567	Mastacembelus_armatus
ENSLBEG00000011107	-	93	98.746	ENSMZEG00005016654	kat5b	74	98.746	Maylandia_zebra
ENSLBEG00000011107	-	95	95.604	ENSMMOG00000016639	kat5b	80	98.433	Mola_mola
ENSLBEG00000011107	-	95	95.652	ENSMALG00000017235	kat5b	79	95.652	Monopterus_albus
ENSLBEG00000011107	-	70	68.120	ENSODEG00000016524	-	91	68.120	Octodon_degus
ENSLBEG00000011107	-	92	98.746	ENSONIG00000005359	kat5b	76	98.746	Oreochromis_niloticus
ENSLBEG00000011107	-	95	91.209	ENSORLG00000007458	kat5b	86	90.503	Oryzias_latipes
ENSLBEG00000011107	-	95	91.209	ENSORLG00020004495	kat5b	82	91.209	Oryzias_latipes_hni
ENSLBEG00000011107	-	95	91.209	ENSORLG00015009730	kat5b	89	90.503	Oryzias_latipes_hsok
ENSLBEG00000011107	-	95	99.060	ENSOMEG00000002350	kat5b	81	99.060	Oryzias_melastigma
ENSLBEG00000011107	-	93	98.119	ENSPKIG00000019383	kat5b	87	95.252	Paramormyrops_kingsleyae
ENSLBEG00000011107	-	95	94.505	ENSPMGG00000020103	kat5b	84	94.505	Periophthalmus_magnuspinnatus
ENSLBEG00000011107	-	95	89.062	ENSPMAG00000008957	kat5b	89	89.062	Petromyzon_marinus
ENSLBEG00000011107	-	93	98.433	ENSPFOG00000010293	kat5b	81	95.549	Poecilia_formosa
ENSLBEG00000011107	-	93	98.433	ENSPLAG00000015158	kat5b	76	98.433	Poecilia_latipinna
ENSLBEG00000011107	-	93	98.433	ENSPMEG00000008824	kat5b	93	91.855	Poecilia_mexicana
ENSLBEG00000011107	-	93	98.433	ENSPREG00000022986	kat5b	74	98.433	Poecilia_reticulata
ENSLBEG00000011107	-	95	95.846	ENSPNYG00000017128	kat5b	81	95.846	Pundamilia_nyererei
ENSLBEG00000011107	-	97	95.988	ENSPNAG00000022600	-	97	87.281	Pygocentrus_nattereri
ENSLBEG00000011107	-	95	95.988	ENSPNAG00000003741	-	91	94.065	Pygocentrus_nattereri
ENSLBEG00000011107	-	89	88.235	ENSSHAG00000001928	-	85	88.235	Sarcophilus_harrisii
ENSLBEG00000011107	-	95	96.584	ENSSFOG00015005779	kat5	84	94.362	Scleropages_formosus
ENSLBEG00000011107	-	95	94.624	ENSSMAG00000013982	kat5b	96	86.325	Scophthalmus_maximus
ENSLBEG00000011107	-	95	96.142	ENSSDUG00000010863	kat5b	82	94.624	Seriola_dumerili
ENSLBEG00000011107	-	95	94.624	ENSSLDG00000018594	kat5b	74	94.624	Seriola_lalandi_dorsalis
ENSLBEG00000011107	-	95	98.913	ENSSPAG00000016282	kat5b	88	98.913	Stegastes_partitus
ENSLBEG00000011107	-	93	98.433	ENSTRUG00000016643	kat5b	84	94.681	Takifugu_rubripes
ENSLBEG00000011107	-	95	95.266	ENSTNIG00000011743	kat5b	81	95.266	Tetraodon_nigroviridis
ENSLBEG00000011107	-	93	89.970	ENSUMAG00000010712	-	80	89.970	Ursus_maritimus
ENSLBEG00000011107	-	95	85.870	ENSXETG00000020586	kat5	83	85.870	Xenopus_tropicalis
ENSLBEG00000011107	-	93	99.060	ENSXMAG00000005173	kat5b	99	77.615	Xiphophorus_maculatus