EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011345 (Gene tree)
Gene ID: 109980955
Gene Symbol: -
Alias: wu:fc68f03|zgc:65870|zgc:77347
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 40315 bases
Position: chrFKLU01000027.1:1539121-1579435
Accession: 109980955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014588	KH_1	PF00013.29	5e-51	1	3
ENSLBEP00000014588	KH_1	PF00013.29	5e-51	2	3
ENSLBEP00000014588	KH_1	PF00013.29	5e-51	3	3
ENSLBEP00000014619	KH_1	PF00013.29	7.1e-40	1	2
ENSLBEP00000014619	KH_1	PF00013.29	7.1e-40	2	2
ENSLBEP00000014588	KH_2	PF07650.17	1.9e-14	1	1
ENSLBEP00000014619	KH_2	PF07650.17	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000015499	-	1311	-	ENSLBEP00000014619	436 (aa)	-	-
ENSLBET00000015466	-	2571	XM_020629547	ENSLBEP00000014588	457 (aa)	XP_020485203	UPI0009B38FDD

Gene Model

Click here to download ENSLBEG00000011345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011345	-	70	33.083	ENSLBEG00000003710	IGF2BP2	84	33.083
ENSLBEG00000011345	-	53	41.538	ENSLBEG00000028542	nova1	50	41.538
ENSLBEG00000011345	-	58	50.769	ENSLBEG00000019787	hnrpkl	74	50.000
ENSLBEG00000011345	-	55	34.615	ENSLBEG00000005191	khsrp	62	34.615
ENSLBEG00000011345	-	54	52.381	ENSLBEG00000001550	hnrnpk	58	54.098
ENSLBEG00000011345	-	72	60.661	ENSLBEG00000006201	pcbp3	95	60.661
ENSLBEG00000011345	-	86	56.402	ENSLBEG00000015211	PCBP2	98	60.000
ENSLBEG00000011345	-	80	53.943	ENSLBEG00000023074	zgc:110045	98	57.224
ENSLBEG00000011345	-	72	53.651	ENSLBEG00000006542	-	94	55.352
ENSLBEG00000011345	-	84	58.754	ENSLBEG00000010080	pcbp2	98	59.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011345	-	96	57.848	ENSG00000090097	PCBP4	97	75.000	Homo_sapiens
ENSLBEG00000011345	-	100	95.842	ENSAPOG00000009897	-	100	95.842	Acanthochromis_polyacanthus
ENSLBEG00000011345	-	51	88.816	ENSAPOG00000018462	-	67	88.816	Acanthochromis_polyacanthus
ENSLBEG00000011345	-	95	58.810	ENSAMEG00000009211	PCBP4	97	59.268	Ailuropoda_melanoleuca
ENSLBEG00000011345	-	94	95.400	ENSACIG00000020434	-	100	95.400	Amphilophus_citrinellus
ENSLBEG00000011345	-	94	74.645	ENSACIG00000015264	pcbp4	94	74.041	Amphilophus_citrinellus
ENSLBEG00000011345	-	94	64.631	ENSAOCG00000006924	-	100	64.286	Amphiprion_ocellaris
ENSLBEG00000011345	-	100	94.495	ENSAOCG00000021366	-	100	94.495	Amphiprion_ocellaris
ENSLBEG00000011345	-	92	67.076	ENSAPEG00000009555	-	79	87.940	Amphiprion_percula
ENSLBEG00000011345	-	94	76.794	ENSAPEG00000023157	pcbp4	100	77.033	Amphiprion_percula
ENSLBEG00000011345	-	92	69.756	ENSATEG00000008529	pcbp4	93	69.249	Anabas_testudineus
ENSLBEG00000011345	-	100	93.607	ENSATEG00000006511	-	100	93.607	Anabas_testudineus
ENSLBEG00000011345	-	95	62.557	ENSACAG00000011701	PCBP4	97	62.557	Anolis_carolinensis
ENSLBEG00000011345	-	96	57.848	ENSANAG00000023072	PCBP4	99	58.296	Aotus_nancymaae
ENSLBEG00000011345	-	98	73.444	ENSACLG00000013348	pcbp4	100	72.167	Astatotilapia_calliptera
ENSLBEG00000011345	-	100	95.624	ENSACLG00000025246	-	100	95.624	Astatotilapia_calliptera
ENSLBEG00000011345	-	100	81.760	ENSAMXG00000033125	pcbp4	100	81.760	Astyanax_mexicanus
ENSLBEG00000011345	-	95	58.810	ENSBTAG00000018622	PCBP4	97	59.268	Bos_taurus
ENSLBEG00000011345	-	96	58.072	ENSCJAG00000005783	PCBP4	99	58.520	Callithrix_jacchus
ENSLBEG00000011345	-	95	58.810	ENSCAFG00000010019	PCBP4	97	59.268	Canis_familiaris
ENSLBEG00000011345	-	95	58.810	ENSCAFG00020022361	PCBP4	97	59.268	Canis_lupus_dingo
ENSLBEG00000011345	-	95	59.039	ENSCHIG00000012918	PCBP4	97	59.268	Capra_hircus
ENSLBEG00000011345	-	95	58.581	ENSTSYG00000008765	PCBP4	97	59.039	Carlito_syrichta
ENSLBEG00000011345	-	95	58.352	ENSCAPG00000005895	PCBP4	97	58.581	Cavia_aperea
ENSLBEG00000011345	-	95	58.352	ENSCPOG00000014617	PCBP4	97	58.810	Cavia_porcellus
ENSLBEG00000011345	-	96	58.072	ENSCCAG00000033268	PCBP4	99	58.520	Cebus_capucinus
ENSLBEG00000011345	-	96	58.072	ENSCATG00000032034	PCBP4	99	58.520	Cercocebus_atys
ENSLBEG00000011345	-	95	58.352	ENSCLAG00000008356	PCBP4	97	58.810	Chinchilla_lanigera
ENSLBEG00000011345	-	96	58.072	ENSCSAG00000013913	PCBP4	99	58.520	Chlorocebus_sabaeus
ENSLBEG00000011345	-	99	60.217	ENSCPBG00000016554	PCBP4	99	60.000	Chrysemys_picta_bellii
ENSLBEG00000011345	-	96	58.072	ENSCANG00000038865	PCBP4	99	58.520	Colobus_angolensis_palliatus
ENSLBEG00000011345	-	95	58.581	ENSCGRG00001014953	Pcbp4	97	59.039	Cricetulus_griseus_chok1gshd
ENSLBEG00000011345	-	95	58.581	ENSCGRG00000008617	Pcbp4	97	59.039	Cricetulus_griseus_crigri
ENSLBEG00000011345	-	100	68.588	ENSCSEG00000014487	pcbp4	100	68.725	Cynoglossus_semilaevis
ENSLBEG00000011345	-	100	85.455	ENSCSEG00000021041	PCBP4	100	85.227	Cynoglossus_semilaevis
ENSLBEG00000011345	-	100	92.779	ENSCVAG00000013090	-	100	92.779	Cyprinodon_variegatus
ENSLBEG00000011345	-	93	68.735	ENSCVAG00000003674	pcbp4	98	67.599	Cyprinodon_variegatus
ENSLBEG00000011345	-	100	80.430	ENSDARG00000024276	pcbp4	100	80.587	Danio_rerio
ENSLBEG00000011345	-	92	79.167	ENSDNOG00000033951	PCBP4	87	72.289	Dasypus_novemcinctus
ENSLBEG00000011345	-	95	57.437	ENSDORG00000000573	Pcbp4	97	58.352	Dipodomys_ordii
ENSLBEG00000011345	-	66	56.592	ENSETEG00000001778	PCBP4	96	56.592	Echinops_telfairi
ENSLBEG00000011345	-	95	58.352	ENSEASG00005012889	PCBP4	97	58.810	Equus_asinus_asinus
ENSLBEG00000011345	-	95	58.352	ENSECAG00000024218	PCBP4	97	58.810	Equus_caballus
ENSLBEG00000011345	-	100	75.681	ENSELUG00000018204	pcbp4	100	76.050	Esox_lucius
ENSLBEG00000011345	-	100	86.177	ENSELUG00000001870	-	100	86.177	Esox_lucius
ENSLBEG00000011345	-	95	58.810	ENSFCAG00000009148	PCBP4	97	59.268	Felis_catus
ENSLBEG00000011345	-	93	58.605	ENSFALG00000008831	PCBP4	95	58.565	Ficedula_albicollis
ENSLBEG00000011345	-	95	58.124	ENSFDAG00000012692	PCBP4	97	58.581	Fukomys_damarensis
ENSLBEG00000011345	-	94	68.983	ENSFHEG00000002769	-	97	68.983	Fundulus_heteroclitus
ENSLBEG00000011345	-	98	87.500	ENSGMOG00000017799	-	100	86.830	Gadus_morhua
ENSLBEG00000011345	-	95	58.219	ENSGALG00000027695	PCBP4	97	58.904	Gallus_gallus
ENSLBEG00000011345	-	83	93.386	ENSGAFG00000021090	-	81	93.386	Gambusia_affinis
ENSLBEG00000011345	-	98	92.634	ENSGACG00000002664	-	100	93.304	Gasterosteus_aculeatus
ENSLBEG00000011345	-	99	60.435	ENSGAGG00000022116	PCBP4	99	60.217	Gopherus_agassizii
ENSLBEG00000011345	-	96	57.848	ENSGGOG00000012474	PCBP4	99	58.296	Gorilla_gorilla
ENSLBEG00000011345	-	98	73.237	ENSHBUG00000009472	pcbp4	100	71.968	Haplochromis_burtoni
ENSLBEG00000011345	-	100	95.405	ENSHBUG00000005329	-	100	95.405	Haplochromis_burtoni
ENSLBEG00000011345	-	95	58.581	ENSHGLG00000012018	PCBP4	97	59.039	Heterocephalus_glaber_female
ENSLBEG00000011345	-	95	56.818	ENSHGLG00100008748	PCBP4	97	57.273	Heterocephalus_glaber_male
ENSLBEG00000011345	-	100	88.428	ENSHCOG00000010838	-	100	88.428	Hippocampus_comes
ENSLBEG00000011345	-	100	82.174	ENSIPUG00000008212	pcbp4	100	82.174	Ictalurus_punctatus
ENSLBEG00000011345	-	97	55.478	ENSSTOG00000002573	PCBP4	97	57.208	Ictidomys_tridecemlineatus
ENSLBEG00000011345	-	95	58.581	ENSJJAG00000016235	Pcbp4	97	59.039	Jaculus_jaculus
ENSLBEG00000011345	-	100	94.311	ENSKMAG00000017554	-	100	94.311	Kryptolebias_marmoratus
ENSLBEG00000011345	-	98	75.641	ENSKMAG00000014252	pcbp4	96	75.106	Kryptolebias_marmoratus
ENSLBEG00000011345	-	100	65.217	ENSLACG00000015899	PCBP4	98	72.845	Latimeria_chalumnae
ENSLBEG00000011345	-	100	79.956	ENSLOCG00000013402	pcbp4	100	79.956	Lepisosteus_oculatus
ENSLBEG00000011345	-	94	55.802	ENSLAFG00000010732	PCBP4	100	56.296	Loxodonta_africana
ENSLBEG00000011345	-	96	58.072	ENSMFAG00000001431	PCBP4	99	58.520	Macaca_fascicularis
ENSLBEG00000011345	-	96	58.072	ENSMMUG00000022205	PCBP4	99	58.520	Macaca_mulatta
ENSLBEG00000011345	-	96	58.072	ENSMNEG00000028553	PCBP4	99	58.520	Macaca_nemestrina
ENSLBEG00000011345	-	96	58.072	ENSMLEG00000027083	PCBP4	99	58.520	Mandrillus_leucophaeus
ENSLBEG00000011345	-	98	74.004	ENSMAMG00000010163	pcbp4	100	71.457	Mastacembelus_armatus
ENSLBEG00000011345	-	100	96.061	ENSMAMG00000011364	-	100	96.061	Mastacembelus_armatus
ENSLBEG00000011345	-	100	95.624	ENSMZEG00005023631	-	100	95.624	Maylandia_zebra
ENSLBEG00000011345	-	98	73.444	ENSMZEG00005008852	pcbp4	100	72.167	Maylandia_zebra
ENSLBEG00000011345	-	67	53.023	ENSMGAG00000003895	-	99	53.023	Meleagris_gallopavo
ENSLBEG00000011345	-	53	73.656	ENSMGAG00000005091	-	85	73.656	Meleagris_gallopavo
ENSLBEG00000011345	-	95	58.581	ENSMAUG00000021064	Pcbp4	97	59.039	Mesocricetus_auratus
ENSLBEG00000011345	-	95	58.581	ENSMICG00000002686	PCBP4	97	59.039	Microcebus_murinus
ENSLBEG00000011345	-	95	59.039	ENSMOCG00000013557	Pcbp4	97	59.497	Microtus_ochrogaster
ENSLBEG00000011345	-	66	64.646	ENSMMOG00000017756	pcbp4	97	61.043	Mola_mola
ENSLBEG00000011345	-	100	92.290	ENSMMOG00000020533	-	100	92.290	Mola_mola
ENSLBEG00000011345	-	95	58.352	ENSMODG00000011790	PCBP4	82	58.352	Monodelphis_domestica
ENSLBEG00000011345	-	90	95.685	ENSMALG00000022117	-	100	95.687	Monopterus_albus
ENSLBEG00000011345	-	89	78.261	ENSMALG00000020318	pcbp4	91	76.905	Monopterus_albus
ENSLBEG00000011345	-	95	58.581	MGP_CAROLIEiJ_G0032623	Pcbp4	93	76.087	Mus_caroli
ENSLBEG00000011345	-	95	58.581	ENSMUSG00000023495	Pcbp4	91	80.741	Mus_musculus
ENSLBEG00000011345	-	95	58.581	MGP_PahariEiJ_G0015491	Pcbp4	93	76.087	Mus_pahari
ENSLBEG00000011345	-	95	58.581	MGP_SPRETEiJ_G0033768	-	93	76.087	Mus_spretus
ENSLBEG00000011345	-	95	58.810	ENSMPUG00000011766	PCBP4	97	59.268	Mustela_putorius_furo
ENSLBEG00000011345	-	95	58.581	ENSNGAG00000013148	Pcbp4	97	59.039	Nannospalax_galili
ENSLBEG00000011345	-	100	93.807	ENSNBRG00000015885	-	100	93.807	Neolamprologus_brichardi
ENSLBEG00000011345	-	96	63.927	ENSNBRG00000007475	pcbp4	98	64.155	Neolamprologus_brichardi
ENSLBEG00000011345	-	96	58.072	ENSNLEG00000007064	PCBP4	99	58.520	Nomascus_leucogenys
ENSLBEG00000011345	-	92	48.884	ENSMEUG00000006917	PCBP4	95	48.884	Notamacropus_eugenii
ENSLBEG00000011345	-	92	51.357	ENSOPRG00000008763	PCBP4	98	51.121	Ochotona_princeps
ENSLBEG00000011345	-	95	58.352	ENSODEG00000018230	PCBP4	97	58.810	Octodon_degus
ENSLBEG00000011345	-	95	57.339	ENSOANG00000014110	PCBP4	94	57.569	Ornithorhynchus_anatinus
ENSLBEG00000011345	-	95	58.581	ENSOCUG00000025336	PCBP4	97	58.810	Oryctolagus_cuniculus
ENSLBEG00000011345	-	98	72.421	ENSORLG00000003061	pcbp4	97	72.141	Oryzias_latipes
ENSLBEG00000011345	-	100	90.519	ENSORLG00000009899	-	100	90.519	Oryzias_latipes
ENSLBEG00000011345	-	100	93.873	ENSORLG00020001183	-	100	93.873	Oryzias_latipes_hni
ENSLBEG00000011345	-	100	94.311	ENSORLG00015017819	-	100	94.311	Oryzias_latipes_hsok
ENSLBEG00000011345	-	98	71.340	ENSORLG00015019262	pcbp4	97	71.134	Oryzias_latipes_hsok
ENSLBEG00000011345	-	100	94.967	ENSOMEG00000011545	-	100	94.967	Oryzias_melastigma
ENSLBEG00000011345	-	98	70.064	ENSOMEG00000003516	-	96	69.851	Oryzias_melastigma
ENSLBEG00000011345	-	95	58.352	ENSOGAG00000032384	PCBP4	97	58.810	Otolemur_garnettii
ENSLBEG00000011345	-	94	57.143	ENSOARG00000006603	PCBP4	100	57.627	Ovis_aries
ENSLBEG00000011345	-	96	58.072	ENSPPAG00000038764	PCBP4	99	58.520	Pan_paniscus
ENSLBEG00000011345	-	95	58.810	ENSPPRG00000006165	PCBP4	97	59.268	Panthera_pardus
ENSLBEG00000011345	-	95	58.810	ENSPTIG00000005401	PCBP4	93	59.268	Panthera_tigris_altaica
ENSLBEG00000011345	-	96	57.848	ENSPTRG00000014983	PCBP4	99	58.296	Pan_troglodytes
ENSLBEG00000011345	-	96	58.072	ENSPANG00000026222	PCBP4	99	58.520	Papio_anubis
ENSLBEG00000011345	-	100	82.096	ENSPKIG00000010244	pcbp4	100	81.878	Paramormyrops_kingsleyae
ENSLBEG00000011345	-	100	74.454	ENSPKIG00000005487	-	100	74.017	Paramormyrops_kingsleyae
ENSLBEG00000011345	-	79	58.378	ENSPSIG00000011286	PCBP4	96	58.378	Pelodiscus_sinensis
ENSLBEG00000011345	-	100	86.105	ENSPMGG00000022732	-	100	86.560	Periophthalmus_magnuspinnatus
ENSLBEG00000011345	-	94	74.286	ENSPMGG00000000063	pcbp4	99	74.048	Periophthalmus_magnuspinnatus
ENSLBEG00000011345	-	95	58.581	ENSPEMG00000009276	Pcbp4	97	59.039	Peromyscus_maniculatus_bairdii
ENSLBEG00000011345	-	95	59.039	ENSPCIG00000018151	PCBP4	93	59.039	Phascolarctos_cinereus
ENSLBEG00000011345	-	95	70.759	ENSPFOG00000014474	pcbp4	96	81.818	Poecilia_formosa
ENSLBEG00000011345	-	100	93.654	ENSPFOG00000002989	-	100	93.654	Poecilia_formosa
ENSLBEG00000011345	-	95	61.502	ENSPLAG00000011438	-	98	82.673	Poecilia_latipinna
ENSLBEG00000011345	-	93	69.974	ENSPLAG00000023316	pcbp4	89	70.757	Poecilia_latipinna
ENSLBEG00000011345	-	63	61.433	ENSPMEG00000012990	pcbp4	100	62.416	Poecilia_mexicana
ENSLBEG00000011345	-	69	58.020	ENSPREG00000021498	-	81	58.020	Poecilia_reticulata
ENSLBEG00000011345	-	100	86.468	ENSPREG00000017370	-	100	86.468	Poecilia_reticulata
ENSLBEG00000011345	-	96	58.072	ENSPPYG00000013822	PCBP4	99	58.520	Pongo_abelii
ENSLBEG00000011345	-	92	52.403	ENSPCAG00000009515	PCBP4	97	52.632	Procavia_capensis
ENSLBEG00000011345	-	95	58.581	ENSPCOG00000027535	PCBP4	97	59.039	Propithecus_coquereli
ENSLBEG00000011345	-	92	49.890	ENSPVAG00000012474	PCBP4	98	48.802	Pteropus_vampyrus
ENSLBEG00000011345	-	100	93.578	ENSPNYG00000003098	-	100	93.578	Pundamilia_nyererei
ENSLBEG00000011345	-	92	74.645	ENSPNYG00000019234	pcbp4	100	72.523	Pundamilia_nyererei
ENSLBEG00000011345	-	100	82.796	ENSPNAG00000025434	pcbp4	100	82.796	Pygocentrus_nattereri
ENSLBEG00000011345	-	95	58.581	ENSRNOG00000012406	Pcbp4	97	59.039	Rattus_norvegicus
ENSLBEG00000011345	-	96	58.072	ENSRBIG00000043793	PCBP4	99	58.520	Rhinopithecus_bieti
ENSLBEG00000011345	-	96	58.072	ENSRROG00000034589	PCBP4	99	58.520	Rhinopithecus_roxellana
ENSLBEG00000011345	-	96	58.072	ENSSBOG00000027029	PCBP4	99	58.520	Saimiri_boliviensis_boliviensis
ENSLBEG00000011345	-	69	59.770	ENSSHAG00000007362	PCBP4	100	59.770	Sarcophilus_harrisii
ENSLBEG00000011345	-	74	81.494	ENSSFOG00015008221	pcbp4	60	81.494	Scleropages_formosus
ENSLBEG00000011345	-	100	75.000	ENSSFOG00015012075	PCBP4	100	74.565	Scleropages_formosus
ENSLBEG00000011345	-	100	93.450	ENSSMAG00000009392	-	99	93.450	Scophthalmus_maximus
ENSLBEG00000011345	-	98	73.895	ENSSMAG00000005827	pcbp4	95	75.105	Scophthalmus_maximus
ENSLBEG00000011345	-	100	95.183	ENSSDUG00000015540	-	100	95.183	Seriola_dumerili
ENSLBEG00000011345	-	94	76.627	ENSSDUG00000017719	pcbp4	97	76.627	Seriola_dumerili
ENSLBEG00000011345	-	100	95.183	ENSSLDG00000007851	-	100	95.183	Seriola_lalandi_dorsalis
ENSLBEG00000011345	-	58	85.443	ENSSLDG00000024847	-	77	88.235	Seriola_lalandi_dorsalis
ENSLBEG00000011345	-	95	57.471	ENSSPUG00000000194	PCBP4	97	57.241	Sphenodon_punctatus
ENSLBEG00000011345	-	94	64.249	ENSSPAG00000019058	-	92	63.990	Stegastes_partitus
ENSLBEG00000011345	-	100	96.280	ENSSPAG00000003033	-	100	96.280	Stegastes_partitus
ENSLBEG00000011345	-	95	58.810	ENSSSCG00000028446	PCBP4	97	59.268	Sus_scrofa
ENSLBEG00000011345	-	70	57.585	ENSTGUG00000006393	PCBP4	96	57.585	Taeniopygia_guttata
ENSLBEG00000011345	-	100	91.972	ENSTRUG00000007426	-	100	91.972	Takifugu_rubripes
ENSLBEG00000011345	-	98	87.248	ENSTNIG00000017887	-	100	86.353	Tetraodon_nigroviridis
ENSLBEG00000011345	-	83	38.670	ENSTBEG00000015770	PCBP4	100	39.409	Tupaia_belangeri
ENSLBEG00000011345	-	72	53.968	ENSTTRG00000001443	PCBP4	83	54.497	Tursiops_truncatus
ENSLBEG00000011345	-	98	51.025	ENSUAMG00000020871	PCBP4	100	55.496	Ursus_americanus
ENSLBEG00000011345	-	86	60.199	ENSUMAG00000021609	PCBP4	90	60.149	Ursus_maritimus
ENSLBEG00000011345	-	95	58.810	ENSVVUG00000026857	PCBP4	97	59.268	Vulpes_vulpes
ENSLBEG00000011345	-	94	83.019	ENSXCOG00000000111	-	100	83.019	Xiphophorus_couchianus
ENSLBEG00000011345	-	89	67.980	ENSXMAG00000022188	-	90	68.966	Xiphophorus_maculatus
ENSLBEG00000011345	-	100	93.217	ENSXMAG00000024530	-	100	93.217	Xiphophorus_maculatus
ENSLBEG00000011345	-	78	82.500	ENSXMAG00000015709	pcbp4	78	81.892	Xiphophorus_maculatus