EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000011448 (Gene tree)
Gene ID: 109985526
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4284 bases
Position: chrFKLU01000083.1:158409-162692
Accession: 109985526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014695	EXOSC1	PF10447.9	1.9e-15	1	1
ENSLBEP00000014711	ECR1_N	PF14382.6	6e-11	1	1
ENSLBEP00000014695	ECR1_N	PF14382.6	6.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000015608	-	534	-	ENSLBEP00000014711	177 (aa)	-	-
ENSLBET00000015592	-	1751	XM_020635893	ENSLBEP00000014695	194 (aa)	XP_020491549	UPI0009B3A164

Gene Model

Click here to download ENSLBEG00000011448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011448	exosc1	98	79.581	ENSG00000171311	EXOSC1	98	79.581	Homo_sapiens
ENSLBEG00000011448	exosc1	100	98.454	ENSAPOG00000007822	exosc1	100	98.454	Acanthochromis_polyacanthus
ENSLBEG00000011448	exosc1	98	80.105	ENSAMEG00000000129	EXOSC1	98	80.105	Ailuropoda_melanoleuca
ENSLBEG00000011448	exosc1	95	97.297	ENSACIG00000018956	exosc1	91	97.297	Amphilophus_citrinellus
ENSLBEG00000011448	exosc1	100	98.454	ENSAOCG00000010699	exosc1	100	98.454	Amphiprion_ocellaris
ENSLBEG00000011448	exosc1	92	89.759	ENSAPEG00000012690	exosc1	97	89.759	Amphiprion_percula
ENSLBEG00000011448	exosc1	100	98.454	ENSATEG00000018683	exosc1	100	98.454	Anabas_testudineus
ENSLBEG00000011448	exosc1	96	78.075	ENSACAG00000002101	EXOSC1	96	78.075	Anolis_carolinensis
ENSLBEG00000011448	exosc1	98	79.581	ENSANAG00000034669	EXOSC1	98	79.581	Aotus_nancymaae
ENSLBEG00000011448	exosc1	100	97.938	ENSACLG00000021243	exosc1	100	97.938	Astatotilapia_calliptera
ENSLBEG00000011448	exosc1	100	93.814	ENSAMXG00000011116	exosc1	100	93.814	Astyanax_mexicanus
ENSLBEG00000011448	exosc1	98	80.105	ENSBTAG00000012699	EXOSC1	98	80.105	Bos_taurus
ENSLBEG00000011448	exosc1	94	36.126	WBGene00012966	exos-1	92	36.126	Caenorhabditis_elegans
ENSLBEG00000011448	exosc1	98	79.058	ENSCJAG00000016586	EXOSC1	98	79.058	Callithrix_jacchus
ENSLBEG00000011448	exosc1	98	79.581	ENSCAFG00000009068	EXOSC1	92	79.581	Canis_familiaris
ENSLBEG00000011448	exosc1	98	79.581	ENSCAFG00020006002	EXOSC1	92	79.581	Canis_lupus_dingo
ENSLBEG00000011448	exosc1	98	80.105	ENSCHIG00000015253	EXOSC1	98	80.105	Capra_hircus
ENSLBEG00000011448	exosc1	98	78.534	ENSTSYG00000000760	EXOSC1	98	78.534	Carlito_syrichta
ENSLBEG00000011448	exosc1	98	79.581	ENSCPOG00000001173	EXOSC1	98	79.581	Cavia_porcellus
ENSLBEG00000011448	exosc1	98	41.969	ENSCCAG00000023986	EXOSC1	98	41.969	Cebus_capucinus
ENSLBEG00000011448	exosc1	98	79.581	ENSCATG00000034114	EXOSC1	98	79.581	Cercocebus_atys
ENSLBEG00000011448	exosc1	98	79.581	ENSCLAG00000002463	EXOSC1	98	79.581	Chinchilla_lanigera
ENSLBEG00000011448	exosc1	98	79.058	ENSCSAG00000005870	EXOSC1	98	79.058	Chlorocebus_sabaeus
ENSLBEG00000011448	exosc1	95	66.848	ENSCHOG00000006477	EXOSC1	98	66.848	Choloepus_hoffmanni
ENSLBEG00000011448	exosc1	55	66.355	ENSCPBG00000011949	EXOSC1	88	66.355	Chrysemys_picta_bellii
ENSLBEG00000011448	exosc1	99	51.295	ENSCING00000022734	-	92	51.295	Ciona_intestinalis
ENSLBEG00000011448	exosc1	99	54.922	ENSCSAVG00000010865	-	98	54.922	Ciona_savignyi
ENSLBEG00000011448	exosc1	98	79.581	ENSCANG00000034159	EXOSC1	98	79.581	Colobus_angolensis_palliatus
ENSLBEG00000011448	exosc1	98	78.534	ENSCGRG00001000335	Exosc1	98	78.534	Cricetulus_griseus_chok1gshd
ENSLBEG00000011448	exosc1	98	78.534	ENSCGRG00000011602	Exosc1	98	78.534	Cricetulus_griseus_crigri
ENSLBEG00000011448	exosc1	100	81.959	ENSCSEG00000007895	exosc1	97	81.959	Cynoglossus_semilaevis
ENSLBEG00000011448	exosc1	100	88.144	ENSCVAG00000016748	exosc1	100	88.144	Cyprinodon_variegatus
ENSLBEG00000011448	exosc1	100	93.814	ENSDARG00000059841	exosc1	100	93.814	Danio_rerio
ENSLBEG00000011448	exosc1	74	75.862	ENSDNOG00000007983	EXOSC1	98	75.862	Dasypus_novemcinctus
ENSLBEG00000011448	exosc1	98	79.058	ENSDORG00000016528	Exosc1	98	79.058	Dipodomys_ordii
ENSLBEG00000011448	exosc1	95	47.368	FBgn0032346	Csl4	92	47.368	Drosophila_melanogaster
ENSLBEG00000011448	exosc1	98	78.010	ENSETEG00000002469	-	98	78.010	Echinops_telfairi
ENSLBEG00000011448	exosc1	97	66.146	ENSEBUG00000008164	exosc1	96	66.146	Eptatretus_burgeri
ENSLBEG00000011448	exosc1	98	70.681	ENSEASG00005008684	EXOSC1	98	70.681	Equus_asinus_asinus
ENSLBEG00000011448	exosc1	60	55.172	ENSECAG00000010621	EXOSC1	69	55.172	Equus_caballus
ENSLBEG00000011448	exosc1	98	78.534	ENSEEUG00000005647	EXOSC1	98	78.534	Erinaceus_europaeus
ENSLBEG00000011448	exosc1	99	90.863	ENSELUG00000017369	exosc1	87	90.863	Esox_lucius
ENSLBEG00000011448	exosc1	98	80.105	ENSFCAG00000040563	EXOSC1	92	80.105	Felis_catus
ENSLBEG00000011448	exosc1	98	78.534	ENSFALG00000008450	EXOSC1	98	78.534	Ficedula_albicollis
ENSLBEG00000011448	exosc1	98	80.105	ENSFDAG00000000846	EXOSC1	98	80.105	Fukomys_damarensis
ENSLBEG00000011448	exosc1	100	88.660	ENSFHEG00000009154	exosc1	100	88.660	Fundulus_heteroclitus
ENSLBEG00000011448	exosc1	100	95.361	ENSGMOG00000008993	exosc1	100	95.361	Gadus_morhua
ENSLBEG00000011448	exosc1	98	65.969	ENSGALG00000039917	EXOSC1	99	84.138	Gallus_gallus
ENSLBEG00000011448	exosc1	100	88.660	ENSGAFG00000010265	exosc1	95	88.660	Gambusia_affinis
ENSLBEG00000011448	exosc1	100	93.814	ENSGACG00000018936	exosc1	100	93.814	Gasterosteus_aculeatus
ENSLBEG00000011448	exosc1	98	76.963	ENSGAGG00000019192	EXOSC1	98	76.963	Gopherus_agassizii
ENSLBEG00000011448	exosc1	98	68.586	ENSGGOG00000003099	EXOSC1	98	68.586	Gorilla_gorilla
ENSLBEG00000011448	exosc1	100	97.938	ENSHBUG00000017857	exosc1	100	97.938	Haplochromis_burtoni
ENSLBEG00000011448	exosc1	98	79.581	ENSHGLG00000016927	EXOSC1	98	79.581	Heterocephalus_glaber_female
ENSLBEG00000011448	exosc1	98	79.581	ENSHGLG00100012208	EXOSC1	98	79.581	Heterocephalus_glaber_male
ENSLBEG00000011448	exosc1	100	94.845	ENSHCOG00000019882	exosc1	100	94.845	Hippocampus_comes
ENSLBEG00000011448	exosc1	100	92.268	ENSIPUG00000007685	exosc1	100	92.268	Ictalurus_punctatus
ENSLBEG00000011448	exosc1	61	63.025	ENSSTOG00000029860	-	91	63.025	Ictidomys_tridecemlineatus
ENSLBEG00000011448	exosc1	98	79.058	ENSSTOG00000006615	EXOSC1	98	79.058	Ictidomys_tridecemlineatus
ENSLBEG00000011448	exosc1	98	79.581	ENSJJAG00000013311	Exosc1	98	79.581	Jaculus_jaculus
ENSLBEG00000011448	exosc1	100	92.784	ENSKMAG00000001202	exosc1	82	92.784	Kryptolebias_marmoratus
ENSLBEG00000011448	exosc1	100	69.945	ENSLOCG00000003776	exosc1	100	69.945	Lepisosteus_oculatus
ENSLBEG00000011448	exosc1	98	79.581	ENSLAFG00000015983	EXOSC1	98	79.581	Loxodonta_africana
ENSLBEG00000011448	exosc1	98	79.581	ENSMFAG00000001493	EXOSC1	98	79.581	Macaca_fascicularis
ENSLBEG00000011448	exosc1	98	79.581	ENSMMUG00000020028	EXOSC1	98	72.821	Macaca_mulatta
ENSLBEG00000011448	exosc1	98	79.581	ENSMNEG00000029816	EXOSC1	98	79.581	Macaca_nemestrina
ENSLBEG00000011448	exosc1	98	73.822	ENSMLEG00000027643	EXOSC1	98	73.822	Mandrillus_leucophaeus
ENSLBEG00000011448	exosc1	100	96.907	ENSMAMG00000012200	exosc1	100	96.907	Mastacembelus_armatus
ENSLBEG00000011448	exosc1	100	97.938	ENSMZEG00005007042	exosc1	100	97.938	Maylandia_zebra
ENSLBEG00000011448	exosc1	98	68.586	ENSMAUG00000020462	-	98	68.586	Mesocricetus_auratus
ENSLBEG00000011448	exosc1	98	79.581	ENSMICG00000007664	EXOSC1	91	79.581	Microcebus_murinus
ENSLBEG00000011448	exosc1	97	74.074	ENSMOCG00000017124	-	96	74.074	Microtus_ochrogaster
ENSLBEG00000011448	exosc1	98	78.534	ENSMOCG00000006004	-	98	78.534	Microtus_ochrogaster
ENSLBEG00000011448	exosc1	100	77.401	ENSMMOG00000021403	exosc1	100	77.401	Mola_mola
ENSLBEG00000011448	exosc1	98	80.729	ENSMODG00000004213	EXOSC1	98	80.729	Monodelphis_domestica
ENSLBEG00000011448	exosc1	95	96.757	ENSMALG00000007061	exosc1	93	96.757	Monopterus_albus
ENSLBEG00000011448	exosc1	98	78.010	MGP_CAROLIEiJ_G0022959	Exosc1	98	78.010	Mus_caroli
ENSLBEG00000011448	exosc1	98	78.010	ENSMUSG00000034321	Exosc1	98	78.010	Mus_musculus
ENSLBEG00000011448	exosc1	98	78.534	MGP_PahariEiJ_G0014449	Exosc1	98	78.534	Mus_pahari
ENSLBEG00000011448	exosc1	98	78.010	MGP_SPRETEiJ_G0023880	Exosc1	98	78.010	Mus_spretus
ENSLBEG00000011448	exosc1	98	80.105	ENSMPUG00000017044	EXOSC1	98	80.105	Mustela_putorius_furo
ENSLBEG00000011448	exosc1	98	79.581	ENSMLUG00000009228	EXOSC1	98	79.581	Myotis_lucifugus
ENSLBEG00000011448	exosc1	98	76.963	ENSNGAG00000022033	Exosc1	98	76.963	Nannospalax_galili
ENSLBEG00000011448	exosc1	100	81.921	ENSNBRG00000024007	exosc1	99	81.921	Neolamprologus_brichardi
ENSLBEG00000011448	exosc1	98	79.058	ENSNLEG00000013872	EXOSC1	98	79.058	Nomascus_leucogenys
ENSLBEG00000011448	exosc1	58	71.429	ENSMEUG00000002246	EXOSC1	97	71.429	Notamacropus_eugenii
ENSLBEG00000011448	exosc1	98	79.058	ENSOPRG00000005065	EXOSC1	98	79.058	Ochotona_princeps
ENSLBEG00000011448	exosc1	98	80.105	ENSODEG00000016709	EXOSC1	98	80.105	Octodon_degus
ENSLBEG00000011448	exosc1	100	97.423	ENSONIG00000017683	exosc1	99	97.423	Oreochromis_niloticus
ENSLBEG00000011448	exosc1	59	91.228	ENSOANG00000006563	EXOSC1	98	87.805	Ornithorhynchus_anatinus
ENSLBEG00000011448	exosc1	98	73.822	ENSOCUG00000026461	-	98	73.822	Oryctolagus_cuniculus
ENSLBEG00000011448	exosc1	98	78.125	ENSOCUG00000011898	-	98	78.125	Oryctolagus_cuniculus
ENSLBEG00000011448	exosc1	100	90.256	ENSORLG00000011595	exosc1	100	90.256	Oryzias_latipes
ENSLBEG00000011448	exosc1	100	90.256	ENSORLG00020005831	exosc1	100	90.256	Oryzias_latipes_hni
ENSLBEG00000011448	exosc1	100	90.256	ENSORLG00015004317	exosc1	100	90.256	Oryzias_latipes_hsok
ENSLBEG00000011448	exosc1	100	79.032	ENSOMEG00000013907	exosc1	99	79.032	Oryzias_melastigma
ENSLBEG00000011448	exosc1	98	79.058	ENSOGAG00000016259	EXOSC1	98	79.058	Otolemur_garnettii
ENSLBEG00000011448	exosc1	98	79.581	ENSOARG00000010136	EXOSC1	98	79.581	Ovis_aries
ENSLBEG00000011448	exosc1	98	73.575	ENSPPAG00000039842	EXOSC1	98	73.575	Pan_paniscus
ENSLBEG00000011448	exosc1	98	80.105	ENSPPRG00000023366	EXOSC1	98	80.105	Panthera_pardus
ENSLBEG00000011448	exosc1	98	80.105	ENSPTIG00000017701	EXOSC1	98	80.105	Panthera_tigris_altaica
ENSLBEG00000011448	exosc1	98	79.581	ENSPTRG00000002808	EXOSC1	98	79.581	Pan_troglodytes
ENSLBEG00000011448	exosc1	98	79.581	ENSPANG00000021324	EXOSC1	98	79.581	Papio_anubis
ENSLBEG00000011448	exosc1	100	91.237	ENSPKIG00000016037	exosc1	100	91.237	Paramormyrops_kingsleyae
ENSLBEG00000011448	exosc1	78	76.433	ENSPSIG00000013571	EXOSC1	98	80.165	Pelodiscus_sinensis
ENSLBEG00000011448	exosc1	100	82.990	ENSPMGG00000014002	exosc1	100	82.990	Periophthalmus_magnuspinnatus
ENSLBEG00000011448	exosc1	98	78.534	ENSPEMG00000010710	-	98	78.534	Peromyscus_maniculatus_bairdii
ENSLBEG00000011448	exosc1	95	70.430	ENSPMAG00000000195	exosc1	95	70.430	Petromyzon_marinus
ENSLBEG00000011448	exosc1	98	79.581	ENSPCIG00000002210	EXOSC1	97	79.581	Phascolarctos_cinereus
ENSLBEG00000011448	exosc1	100	88.144	ENSPFOG00000006755	exosc1	95	88.144	Poecilia_formosa
ENSLBEG00000011448	exosc1	100	88.144	ENSPLAG00000005880	exosc1	100	88.144	Poecilia_latipinna
ENSLBEG00000011448	exosc1	100	88.144	ENSPMEG00000015598	exosc1	95	88.144	Poecilia_mexicana
ENSLBEG00000011448	exosc1	100	76.289	ENSPREG00000000405	exosc1	94	76.289	Poecilia_reticulata
ENSLBEG00000011448	exosc1	98	79.581	ENSPPYG00000002531	EXOSC1	98	79.581	Pongo_abelii
ENSLBEG00000011448	exosc1	98	78.534	ENSPCAG00000009135	EXOSC1	98	78.534	Procavia_capensis
ENSLBEG00000011448	exosc1	98	75.978	ENSPCOG00000027539	EXOSC1	98	75.978	Propithecus_coquereli
ENSLBEG00000011448	exosc1	98	79.581	ENSPVAG00000003372	EXOSC1	98	79.581	Pteropus_vampyrus
ENSLBEG00000011448	exosc1	100	97.938	ENSPNYG00000021745	exosc1	100	97.938	Pundamilia_nyererei
ENSLBEG00000011448	exosc1	100	92.784	ENSPNAG00000001944	exosc1	100	92.784	Pygocentrus_nattereri
ENSLBEG00000011448	exosc1	98	78.534	ENSRNOG00000048708	Exosc1	98	78.534	Rattus_norvegicus
ENSLBEG00000011448	exosc1	98	79.581	ENSRBIG00000035618	EXOSC1	98	79.581	Rhinopithecus_bieti
ENSLBEG00000011448	exosc1	98	79.581	ENSRROG00000032589	EXOSC1	91	79.581	Rhinopithecus_roxellana
ENSLBEG00000011448	exosc1	64	38.125	YNL232W	CSL4	54	38.125	Saccharomyces_cerevisiae
ENSLBEG00000011448	exosc1	98	79.581	ENSSBOG00000000359	EXOSC1	98	79.581	Saimiri_boliviensis_boliviensis
ENSLBEG00000011448	exosc1	75	89.726	ENSSHAG00000018219	EXOSC1	99	89.726	Sarcophilus_harrisii
ENSLBEG00000011448	exosc1	100	91.237	ENSSFOG00015009069	exosc1	100	91.237	Scleropages_formosus
ENSLBEG00000011448	exosc1	100	88.660	ENSSFOG00015016289	-	100	88.660	Scleropages_formosus
ENSLBEG00000011448	exosc1	100	97.938	ENSSMAG00000003721	exosc1	100	97.938	Scophthalmus_maximus
ENSLBEG00000011448	exosc1	100	96.907	ENSSDUG00000002993	exosc1	100	96.907	Seriola_dumerili
ENSLBEG00000011448	exosc1	100	96.907	ENSSLDG00000025181	exosc1	100	96.907	Seriola_lalandi_dorsalis
ENSLBEG00000011448	exosc1	98	68.063	ENSSARG00000000162	EXOSC1	98	68.063	Sorex_araneus
ENSLBEG00000011448	exosc1	98	75.393	ENSSPUG00000012263	EXOSC1	98	75.393	Sphenodon_punctatus
ENSLBEG00000011448	exosc1	100	91.525	ENSSPAG00000016792	exosc1	83	91.525	Stegastes_partitus
ENSLBEG00000011448	exosc1	98	79.058	ENSSSCG00000010518	EXOSC1	89	79.058	Sus_scrofa
ENSLBEG00000011448	exosc1	98	78.010	ENSTGUG00000009692	EXOSC1	98	78.010	Taeniopygia_guttata
ENSLBEG00000011448	exosc1	98	82.105	ENSTRUG00000007706	exosc1	98	82.105	Takifugu_rubripes
ENSLBEG00000011448	exosc1	98	82.383	ENSTNIG00000014079	exosc1	97	82.383	Tetraodon_nigroviridis
ENSLBEG00000011448	exosc1	98	73.822	ENSTBEG00000006011	EXOSC1	98	73.822	Tupaia_belangeri
ENSLBEG00000011448	exosc1	94	81.421	ENSTTRG00000009887	EXOSC1	99	81.421	Tursiops_truncatus
ENSLBEG00000011448	exosc1	98	68.000	ENSUAMG00000010266	EXOSC1	98	68.000	Ursus_americanus
ENSLBEG00000011448	exosc1	98	68.000	ENSUMAG00000022002	EXOSC1	98	68.000	Ursus_maritimus
ENSLBEG00000011448	exosc1	98	79.581	ENSVVUG00000023192	EXOSC1	62	79.581	Vulpes_vulpes
ENSLBEG00000011448	exosc1	99	76.166	ENSXETG00000003434	exosc1	99	76.166	Xenopus_tropicalis
ENSLBEG00000011448	exosc1	62	90.083	ENSXCOG00000014499	exosc1	93	90.083	Xiphophorus_couchianus
ENSLBEG00000011448	exosc1	100	76.804	ENSXMAG00000023382	exosc1	94	76.804	Xiphophorus_maculatus