EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000011585 (Gene tree)
Gene ID: 109978719
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 10351 bases
Position: chrFKLU01000021.1:1084479-1094829
Accession: 109978719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014913	Beta-Casp	PF10996.8	4.2e-21	1	1
ENSLBEP00000014887	Beta-Casp	PF10996.8	4.3e-21	1	1
ENSLBEP00000014913	RMMBL	PF07521.12	4.4e-14	1	1
ENSLBEP00000014887	RMMBL	PF07521.12	4.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000015821	-	2184	XM_020627976	ENSLBEP00000014913	727 (aa)	XP_020483632	-
ENSLBET00000015795	-	3198	-	ENSLBEP00000014887	746 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000011585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011585	cpsf2	100	84.492	ENSG00000165934	CPSF2	95	84.358	Homo_sapiens
ENSLBEG00000011585	cpsf2	100	95.040	ENSAPOG00000001242	cpsf2	95	95.040	Acanthochromis_polyacanthus
ENSLBEG00000011585	cpsf2	100	94.511	ENSACIG00000009331	cpsf2	95	94.511	Amphilophus_citrinellus
ENSLBEG00000011585	cpsf2	100	95.174	ENSAOCG00000014095	cpsf2	95	95.174	Amphiprion_ocellaris
ENSLBEG00000011585	cpsf2	100	95.174	ENSAPEG00000009158	cpsf2	95	95.174	Amphiprion_percula
ENSLBEG00000011585	cpsf2	96	94.142	ENSATEG00000017644	cpsf2	99	93.624	Anabas_testudineus
ENSLBEG00000011585	cpsf2	100	83.979	ENSAPLG00000006330	CPSF2	95	83.979	Anas_platyrhynchos
ENSLBEG00000011585	cpsf2	100	83.824	ENSACAG00000009245	CPSF2	95	83.690	Anolis_carolinensis
ENSLBEG00000011585	cpsf2	100	84.492	ENSANAG00000022915	CPSF2	95	84.225	Aotus_nancymaae
ENSLBEG00000011585	cpsf2	100	89.037	ENSAMXG00000018696	cpsf2	99	87.312	Astyanax_mexicanus
ENSLBEG00000011585	cpsf2	100	84.358	ENSBTAG00000010227	CPSF2	95	84.203	Bos_taurus
ENSLBEG00000011585	cpsf2	100	40.859	WBGene00017313	cpsf-2	74	44.146	Caenorhabditis_elegans
ENSLBEG00000011585	cpsf2	100	84.492	ENSCJAG00000018069	CPSF2	95	84.225	Callithrix_jacchus
ENSLBEG00000011585	cpsf2	100	84.225	ENSCAFG00000010909	CPSF2	95	84.070	Canis_familiaris
ENSLBEG00000011585	cpsf2	100	84.225	ENSCAFG00020020670	CPSF2	100	81.593	Canis_lupus_dingo
ENSLBEG00000011585	cpsf2	100	84.358	ENSCHIG00000023848	CPSF2	95	84.203	Capra_hircus
ENSLBEG00000011585	cpsf2	100	84.358	ENSTSYG00000009036	CPSF2	95	84.203	Carlito_syrichta
ENSLBEG00000011585	cpsf2	100	84.358	ENSCPOG00000010899	CPSF2	95	84.203	Cavia_porcellus
ENSLBEG00000011585	cpsf2	100	84.492	ENSCCAG00000028088	CPSF2	95	84.225	Cebus_capucinus
ENSLBEG00000011585	cpsf2	100	84.358	ENSCATG00000030132	CPSF2	95	84.203	Cercocebus_atys
ENSLBEG00000011585	cpsf2	100	84.358	ENSCLAG00000012404	CPSF2	95	84.225	Chinchilla_lanigera
ENSLBEG00000011585	cpsf2	100	84.358	ENSCSAG00000011300	CPSF2	95	84.203	Chlorocebus_sabaeus
ENSLBEG00000011585	cpsf2	100	78.877	ENSCHOG00000012904	CPSF2	95	78.715	Choloepus_hoffmanni
ENSLBEG00000011585	cpsf2	100	84.626	ENSCPBG00000008766	CPSF2	92	84.873	Chrysemys_picta_bellii
ENSLBEG00000011585	cpsf2	100	52.094	ENSCING00000007881	-	100	47.153	Ciona_intestinalis
ENSLBEG00000011585	cpsf2	99	84.730	ENSCANG00000041651	CPSF2	100	84.553	Colobus_angolensis_palliatus
ENSLBEG00000011585	cpsf2	100	84.091	ENSCGRG00001006901	Cpsf2	95	84.203	Cricetulus_griseus_chok1gshd
ENSLBEG00000011585	cpsf2	100	84.091	ENSCGRG00000012416	Cpsf2	95	84.203	Cricetulus_griseus_crigri
ENSLBEG00000011585	cpsf2	100	92.637	ENSCSEG00000004116	cpsf2	95	92.637	Cynoglossus_semilaevis
ENSLBEG00000011585	cpsf2	100	93.029	ENSCVAG00000000095	cpsf2	95	93.029	Cyprinodon_variegatus
ENSLBEG00000011585	cpsf2	100	87.717	ENSDARG00000028971	cpsf2	99	85.764	Danio_rerio
ENSLBEG00000011585	cpsf2	100	84.358	ENSDNOG00000042757	CPSF2	95	84.203	Dasypus_novemcinctus
ENSLBEG00000011585	cpsf2	100	84.358	ENSDORG00000013709	Cpsf2	95	84.203	Dipodomys_ordii
ENSLBEG00000011585	cpsf2	99	52.673	FBgn0027873	Cpsf100	94	51.546	Drosophila_melanogaster
ENSLBEG00000011585	cpsf2	100	76.368	ENSETEG00000012123	CPSF2	95	76.235	Echinops_telfairi
ENSLBEG00000011585	cpsf2	56	75.550	ENSEBUG00000012098	cpsf2	93	75.550	Eptatretus_burgeri
ENSLBEG00000011585	cpsf2	88	89.683	ENSEASG00005021193	CPSF2	94	89.683	Equus_asinus_asinus
ENSLBEG00000011585	cpsf2	100	84.225	ENSECAG00000023935	CPSF2	95	84.070	Equus_caballus
ENSLBEG00000011585	cpsf2	100	88.771	ENSELUG00000008442	cpsf2	95	88.639	Esox_lucius
ENSLBEG00000011585	cpsf2	100	84.225	ENSFCAG00000007886	CPSF2	95	84.070	Felis_catus
ENSLBEG00000011585	cpsf2	100	84.471	ENSFALG00000002412	CPSF2	95	84.471	Ficedula_albicollis
ENSLBEG00000011585	cpsf2	100	84.225	ENSFDAG00000006327	CPSF2	95	84.070	Fukomys_damarensis
ENSLBEG00000011585	cpsf2	96	91.701	ENSFHEG00000015465	cpsf2	93	92.521	Fundulus_heteroclitus
ENSLBEG00000011585	cpsf2	100	89.880	ENSGMOG00000008761	cpsf2	95	89.453	Gadus_morhua
ENSLBEG00000011585	cpsf2	100	84.739	ENSGALG00000010783	CPSF2	95	84.739	Gallus_gallus
ENSLBEG00000011585	cpsf2	100	93.700	ENSGAFG00000001407	cpsf2	95	93.700	Gambusia_affinis
ENSLBEG00000011585	cpsf2	100	95.308	ENSGACG00000008418	cpsf2	100	94.637	Gasterosteus_aculeatus
ENSLBEG00000011585	cpsf2	100	84.492	ENSGAGG00000008287	CPSF2	95	84.739	Gopherus_agassizii
ENSLBEG00000011585	cpsf2	100	84.492	ENSGGOG00000011799	CPSF2	95	84.358	Gorilla_gorilla
ENSLBEG00000011585	cpsf2	99	93.423	ENSHBUG00000023466	cpsf2	95	93.423	Haplochromis_burtoni
ENSLBEG00000011585	cpsf2	100	84.358	ENSHGLG00000018311	CPSF2	95	84.203	Heterocephalus_glaber_female
ENSLBEG00000011585	cpsf2	100	84.358	ENSHGLG00100016460	CPSF2	95	84.203	Heterocephalus_glaber_male
ENSLBEG00000011585	cpsf2	100	92.359	ENSHCOG00000019527	cpsf2	93	92.359	Hippocampus_comes
ENSLBEG00000011585	cpsf2	100	89.037	ENSIPUG00000020857	cpsf2	95	88.904	Ictalurus_punctatus
ENSLBEG00000011585	cpsf2	100	84.492	ENSSTOG00000009528	CPSF2	95	84.225	Ictidomys_tridecemlineatus
ENSLBEG00000011585	cpsf2	100	84.225	ENSJJAG00000017925	Cpsf2	95	84.070	Jaculus_jaculus
ENSLBEG00000011585	cpsf2	100	93.164	ENSKMAG00000019429	cpsf2	95	93.164	Kryptolebias_marmoratus
ENSLBEG00000011585	cpsf2	100	82.865	ENSLACG00000019024	CPSF2	95	82.865	Latimeria_chalumnae
ENSLBEG00000011585	cpsf2	100	87.583	ENSLOCG00000014102	cpsf2	95	87.450	Lepisosteus_oculatus
ENSLBEG00000011585	cpsf2	100	84.267	ENSLAFG00000004891	CPSF2	95	84.133	Loxodonta_africana
ENSLBEG00000011585	cpsf2	100	84.358	ENSMFAG00000041212	CPSF2	95	84.203	Macaca_fascicularis
ENSLBEG00000011585	cpsf2	100	84.358	ENSMMUG00000000699	CPSF2	95	84.203	Macaca_mulatta
ENSLBEG00000011585	cpsf2	100	84.358	ENSMNEG00000031584	CPSF2	95	84.203	Macaca_nemestrina
ENSLBEG00000011585	cpsf2	100	84.358	ENSMLEG00000029394	CPSF2	95	84.203	Mandrillus_leucophaeus
ENSLBEG00000011585	cpsf2	100	94.638	ENSMAMG00000004235	cpsf2	95	94.638	Mastacembelus_armatus
ENSLBEG00000011585	cpsf2	99	93.557	ENSMZEG00005001769	cpsf2	95	93.557	Maylandia_zebra
ENSLBEG00000011585	cpsf2	100	84.492	ENSMGAG00000013122	CPSF2	95	84.492	Meleagris_gallopavo
ENSLBEG00000011585	cpsf2	100	84.225	ENSMAUG00000015160	Cpsf2	95	84.337	Mesocricetus_auratus
ENSLBEG00000011585	cpsf2	100	84.358	ENSMICG00000016441	CPSF2	95	84.203	Microcebus_murinus
ENSLBEG00000011585	cpsf2	100	83.824	ENSMOCG00000015372	Cpsf2	95	83.936	Microtus_ochrogaster
ENSLBEG00000011585	cpsf2	100	89.946	ENSMMOG00000015590	cpsf2	95	89.946	Mola_mola
ENSLBEG00000011585	cpsf2	100	84.492	ENSMODG00000002042	CPSF2	95	84.225	Monodelphis_domestica
ENSLBEG00000011585	cpsf2	100	90.751	ENSMALG00000022275	cpsf2	95	90.751	Monopterus_albus
ENSLBEG00000011585	cpsf2	100	83.824	ENSMUSG00000041781	Cpsf2	95	83.668	Mus_musculus
ENSLBEG00000011585	cpsf2	100	83.690	MGP_PahariEiJ_G0029791	Cpsf2	95	83.534	Mus_pahari
ENSLBEG00000011585	cpsf2	100	83.824	MGP_SPRETEiJ_G0018877	Cpsf2	95	83.668	Mus_spretus
ENSLBEG00000011585	cpsf2	100	84.358	ENSMPUG00000007617	CPSF2	93	84.203	Mustela_putorius_furo
ENSLBEG00000011585	cpsf2	100	84.091	ENSMLUG00000005570	CPSF2	95	84.070	Myotis_lucifugus
ENSLBEG00000011585	cpsf2	100	84.091	ENSNGAG00000020312	Cpsf2	95	83.936	Nannospalax_galili
ENSLBEG00000011585	cpsf2	99	93.691	ENSNBRG00000022402	cpsf2	95	93.691	Neolamprologus_brichardi
ENSLBEG00000011585	cpsf2	100	83.690	ENSNLEG00000017132	CPSF2	95	83.556	Nomascus_leucogenys
ENSLBEG00000011585	cpsf2	91	92.937	ENSMEUG00000008138	CPSF2	86	92.937	Notamacropus_eugenii
ENSLBEG00000011585	cpsf2	99	80.894	ENSOPRG00000008484	-	92	88.294	Ochotona_princeps
ENSLBEG00000011585	cpsf2	100	84.091	ENSODEG00000008682	CPSF2	95	83.936	Octodon_degus
ENSLBEG00000011585	cpsf2	100	93.298	ENSONIG00000005901	cpsf2	95	93.298	Oreochromis_niloticus
ENSLBEG00000011585	cpsf2	100	84.626	ENSOANG00000003822	CPSF2	95	84.471	Ornithorhynchus_anatinus
ENSLBEG00000011585	cpsf2	100	84.225	ENSOCUG00000005713	CPSF2	95	84.070	Oryctolagus_cuniculus
ENSLBEG00000011585	cpsf2	100	91.363	ENSORLG00000011628	cpsf2	100	91.363	Oryzias_latipes
ENSLBEG00000011585	cpsf2	100	93.432	ENSORLG00020016980	cpsf2	95	93.432	Oryzias_latipes_hni
ENSLBEG00000011585	cpsf2	100	93.432	ENSORLG00015011910	cpsf2	95	93.432	Oryzias_latipes_hsok
ENSLBEG00000011585	cpsf2	100	92.905	ENSOMEG00000022876	cpsf2	95	92.771	Oryzias_melastigma
ENSLBEG00000011585	cpsf2	100	81.200	ENSOARG00000012889	CPSF2	95	81.041	Ovis_aries
ENSLBEG00000011585	cpsf2	100	84.492	ENSPPAG00000039666	CPSF2	95	84.358	Pan_paniscus
ENSLBEG00000011585	cpsf2	100	84.225	ENSPPRG00000010869	CPSF2	95	84.070	Panthera_pardus
ENSLBEG00000011585	cpsf2	100	84.225	ENSPTIG00000021202	CPSF2	95	84.070	Panthera_tigris_altaica
ENSLBEG00000011585	cpsf2	100	84.492	ENSPTRG00000006651	CPSF2	95	84.358	Pan_troglodytes
ENSLBEG00000011585	cpsf2	100	84.358	ENSPANG00000017417	CPSF2	95	84.203	Papio_anubis
ENSLBEG00000011585	cpsf2	100	87.618	ENSPKIG00000021453	cpsf2	100	87.483	Paramormyrops_kingsleyae
ENSLBEG00000011585	cpsf2	100	84.091	ENSPSIG00000006289	CPSF2	95	84.337	Pelodiscus_sinensis
ENSLBEG00000011585	cpsf2	82	88.833	ENSPMGG00000002511	cpsf2	99	87.521	Periophthalmus_magnuspinnatus
ENSLBEG00000011585	cpsf2	100	83.957	ENSPEMG00000007917	Cpsf2	95	83.802	Peromyscus_maniculatus_bairdii
ENSLBEG00000011585	cpsf2	99	72.053	ENSPMAG00000006205	cpsf2	95	72.053	Petromyzon_marinus
ENSLBEG00000011585	cpsf2	100	84.492	ENSPCIG00000011393	CPSF2	95	84.225	Phascolarctos_cinereus
ENSLBEG00000011585	cpsf2	100	93.968	ENSPFOG00000018648	cpsf2	95	93.968	Poecilia_formosa
ENSLBEG00000011585	cpsf2	100	93.968	ENSPLAG00000019199	cpsf2	94	93.968	Poecilia_latipinna
ENSLBEG00000011585	cpsf2	100	93.968	ENSPMEG00000012100	cpsf2	100	93.968	Poecilia_mexicana
ENSLBEG00000011585	cpsf2	100	93.432	ENSPREG00000008960	cpsf2	95	93.432	Poecilia_reticulata
ENSLBEG00000011585	cpsf2	69	80.716	ENSPPYG00000029685	-	100	80.517	Pongo_abelii
ENSLBEG00000011585	cpsf2	100	84.492	ENSPCAG00000012477	CPSF2	95	84.358	Procavia_capensis
ENSLBEG00000011585	cpsf2	100	84.358	ENSPCOG00000026387	CPSF2	95	84.203	Propithecus_coquereli
ENSLBEG00000011585	cpsf2	63	89.744	ENSPVAG00000004223	CPSF2	65	85.333	Pteropus_vampyrus
ENSLBEG00000011585	cpsf2	99	93.164	ENSPNYG00000023356	cpsf2	95	93.164	Pundamilia_nyererei
ENSLBEG00000011585	cpsf2	100	89.706	ENSPNAG00000001849	cpsf2	95	89.572	Pygocentrus_nattereri
ENSLBEG00000011585	cpsf2	100	83.824	ENSRNOG00000005733	Cpsf2	95	83.668	Rattus_norvegicus
ENSLBEG00000011585	cpsf2	100	84.358	ENSRBIG00000044792	CPSF2	95	84.203	Rhinopithecus_bieti
ENSLBEG00000011585	cpsf2	100	84.358	ENSRROG00000034875	CPSF2	95	84.203	Rhinopithecus_roxellana
ENSLBEG00000011585	cpsf2	100	84.492	ENSSBOG00000024571	CPSF2	95	84.225	Saimiri_boliviensis_boliviensis
ENSLBEG00000011585	cpsf2	100	84.492	ENSSHAG00000010458	CPSF2	95	84.225	Sarcophilus_harrisii
ENSLBEG00000011585	cpsf2	100	90.107	ENSSFOG00015002117	cpsf2	95	90.107	Scleropages_formosus
ENSLBEG00000011585	cpsf2	100	94.779	ENSSMAG00000002001	cpsf2	95	94.913	Scophthalmus_maximus
ENSLBEG00000011585	cpsf2	100	95.845	ENSSDUG00000004084	cpsf2	95	95.845	Seriola_dumerili
ENSLBEG00000011585	cpsf2	100	95.442	ENSSLDG00000024330	cpsf2	95	95.442	Seriola_lalandi_dorsalis
ENSLBEG00000011585	cpsf2	56	94.059	ENSSARG00000009784	-	58	94.059	Sorex_araneus
ENSLBEG00000011585	cpsf2	100	83.824	ENSSPUG00000013485	CPSF2	95	84.070	Sphenodon_punctatus
ENSLBEG00000011585	cpsf2	100	94.638	ENSSPAG00000013284	cpsf2	95	94.638	Stegastes_partitus
ENSLBEG00000011585	cpsf2	100	84.225	ENSSSCG00000002447	CPSF2	95	84.070	Sus_scrofa
ENSLBEG00000011585	cpsf2	100	84.337	ENSTGUG00000012571	-	95	84.337	Taeniopygia_guttata
ENSLBEG00000011585	cpsf2	100	92.895	ENSTRUG00000003742	cpsf2	100	89.069	Takifugu_rubripes
ENSLBEG00000011585	cpsf2	100	91.444	ENSTNIG00000012228	cpsf2	95	92.513	Tetraodon_nigroviridis
ENSLBEG00000011585	cpsf2	91	81.957	ENSTBEG00000004530	CPSF2	83	86.978	Tupaia_belangeri
ENSLBEG00000011585	cpsf2	93	82.923	ENSTTRG00000008697	CPSF2	88	82.743	Tursiops_truncatus
ENSLBEG00000011585	cpsf2	100	84.358	ENSUAMG00000028071	CPSF2	95	84.203	Ursus_americanus
ENSLBEG00000011585	cpsf2	100	84.358	ENSUMAG00000005029	CPSF2	95	84.203	Ursus_maritimus
ENSLBEG00000011585	cpsf2	99	84.203	ENSVPAG00000003503	CPSF2	95	84.048	Vicugna_pacos
ENSLBEG00000011585	cpsf2	100	84.225	ENSVVUG00000024642	CPSF2	95	84.070	Vulpes_vulpes
ENSLBEG00000011585	cpsf2	100	84.225	ENSXETG00000010289	cpsf2	95	84.070	Xenopus_tropicalis
ENSLBEG00000011585	cpsf2	100	93.029	ENSXCOG00000001764	cpsf2	95	93.029	Xiphophorus_couchianus
ENSLBEG00000011585	cpsf2	100	93.700	ENSXMAG00000017048	cpsf2	95	93.700	Xiphophorus_maculatus