EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011642 (Gene tree)
Gene ID: 109978228
Gene Symbol: rbm45
Alias: drb1|si:ch211-222f23.2
Full Name: RNA-binding protein 45-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 8175 bases
Position: chrFKLU01006494.1:3749-11923
Accession: 109978228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014963	RRM_1	PF00076.22	3.5e-50	1	4
ENSLBEP00000014963	RRM_1	PF00076.22	3.5e-50	2	4
ENSLBEP00000014963	RRM_1	PF00076.22	3.5e-50	3	4
ENSLBEP00000014963	RRM_1	PF00076.22	3.5e-50	4	4
ENSLBEP00000014980	RRM_1	PF00076.22	3.5e-50	1	4
ENSLBEP00000014980	RRM_1	PF00076.22	3.5e-50	2	4
ENSLBEP00000014980	RRM_1	PF00076.22	3.5e-50	3	4
ENSLBEP00000014980	RRM_1	PF00076.22	3.5e-50	4	4
ENSLBEP00000014999	RRM_1	PF00076.22	3.5e-50	1	4
ENSLBEP00000014999	RRM_1	PF00076.22	3.5e-50	2	4
ENSLBEP00000014999	RRM_1	PF00076.22	3.5e-50	3	4
ENSLBEP00000014999	RRM_1	PF00076.22	3.5e-50	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000015889	-	3710	-	ENSLBEP00000014980	466 (aa)	-	UPI0009B432DB
ENSLBET00000015907	-	3132	XM_020627696	ENSLBEP00000014999	466 (aa)	XP_020483352	UPI0009B432DB
ENSLBET00000015871	-	3834	-	ENSLBEP00000014963	466 (aa)	-	UPI0009B432DB

Gene Model

Click here to download ENSLBEG00000011642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011642	rbm45	98	99.557	ENSLBEG00000002556	-	99	99.557
ENSLBEG00000011642	rbm45	93	33.333	ENSLBEG00000013654	pabpc4	60	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011642	rbm45	99	59.002	ENSG00000155636	RBM45	99	60.000	Homo_sapiens
ENSLBEG00000011642	rbm45	99	86.920	ENSAPOG00000009219	rbm45	99	86.920	Acanthochromis_polyacanthus
ENSLBEG00000011642	rbm45	99	58.099	ENSAMEG00000000896	RBM45	96	58.099	Ailuropoda_melanoleuca
ENSLBEG00000011642	rbm45	98	83.991	ENSACIG00000009234	rbm45	99	82.479	Amphilophus_citrinellus
ENSLBEG00000011642	rbm45	99	86.737	ENSAOCG00000007638	rbm45	99	86.737	Amphiprion_ocellaris
ENSLBEG00000011642	rbm45	99	86.920	ENSAPEG00000014352	rbm45	99	86.920	Amphiprion_percula
ENSLBEG00000011642	rbm45	99	87.742	ENSATEG00000016948	rbm45	99	87.742	Anabas_testudineus
ENSLBEG00000011642	rbm45	95	54.450	ENSAPLG00000011049	RBM45	99	54.450	Anas_platyrhynchos
ENSLBEG00000011642	rbm45	99	59.002	ENSANAG00000034660	RBM45	96	59.002	Aotus_nancymaae
ENSLBEG00000011642	rbm45	99	82.655	ENSACLG00000027286	rbm45	99	82.655	Astatotilapia_calliptera
ENSLBEG00000011642	rbm45	99	83.940	ENSACLG00000027201	-	99	83.940	Astatotilapia_calliptera
ENSLBEG00000011642	rbm45	99	71.711	ENSAMXG00000007463	rbm45	98	71.711	Astyanax_mexicanus
ENSLBEG00000011642	rbm45	99	58.785	ENSBTAG00000006168	RBM45	96	58.785	Bos_taurus
ENSLBEG00000011642	rbm45	98	65.972	ENSCJAG00000021516	RBM45	96	65.972	Callithrix_jacchus
ENSLBEG00000011642	rbm45	99	57.749	ENSCAFG00000013640	RBM45	96	57.749	Canis_familiaris
ENSLBEG00000011642	rbm45	99	57.883	ENSCAFG00020007013	RBM45	96	57.883	Canis_lupus_dingo
ENSLBEG00000011642	rbm45	99	58.785	ENSCHIG00000010687	RBM45	96	58.785	Capra_hircus
ENSLBEG00000011642	rbm45	99	59.002	ENSTSYG00000007757	RBM45	96	59.002	Carlito_syrichta
ENSLBEG00000011642	rbm45	95	51.724	ENSCAPG00000009388	RBM45	92	51.706	Cavia_aperea
ENSLBEG00000011642	rbm45	99	57.451	ENSCPOG00000000684	RBM45	96	57.451	Cavia_porcellus
ENSLBEG00000011642	rbm45	99	59.436	ENSCCAG00000022783	RBM45	96	59.436	Cebus_capucinus
ENSLBEG00000011642	rbm45	99	59.219	ENSCATG00000041082	RBM45	96	59.219	Cercocebus_atys
ENSLBEG00000011642	rbm45	99	58.042	ENSCLAG00000015215	RBM45	94	58.042	Chinchilla_lanigera
ENSLBEG00000011642	rbm45	99	59.219	ENSCSAG00000014231	RBM45	96	59.219	Chlorocebus_sabaeus
ENSLBEG00000011642	rbm45	99	58.621	ENSCHOG00000009809	RBM45	99	58.621	Choloepus_hoffmanni
ENSLBEG00000011642	rbm45	99	53.797	ENSCPBG00000003246	RBM45	99	54.008	Chrysemys_picta_bellii
ENSLBEG00000011642	rbm45	99	59.219	ENSCANG00000040777	RBM45	96	59.219	Colobus_angolensis_palliatus
ENSLBEG00000011642	rbm45	99	57.667	ENSCGRG00001005759	Rbm45	96	57.667	Cricetulus_griseus_chok1gshd
ENSLBEG00000011642	rbm45	99	57.667	ENSCGRG00000010816	Rbm45	96	57.667	Cricetulus_griseus_crigri
ENSLBEG00000011642	rbm45	99	75.957	ENSCSEG00000017409	rbm45	99	75.957	Cynoglossus_semilaevis
ENSLBEG00000011642	rbm45	99	72.281	ENSCVAG00000016127	rbm45	99	72.281	Cyprinodon_variegatus
ENSLBEG00000011642	rbm45	99	68.683	ENSDARG00000063731	rbm45	99	73.684	Danio_rerio
ENSLBEG00000011642	rbm45	99	58.568	ENSDNOG00000001973	RBM45	96	58.568	Dasypus_novemcinctus
ENSLBEG00000011642	rbm45	99	59.436	ENSDORG00000015831	Rbm45	96	59.436	Dipodomys_ordii
ENSLBEG00000011642	rbm45	95	34.238	FBgn0035526	CG1316	93	34.576	Drosophila_melanogaster
ENSLBEG00000011642	rbm45	99	52.941	ENSETEG00000013424	RBM45	96	52.941	Echinops_telfairi
ENSLBEG00000011642	rbm45	99	48.018	ENSEBUG00000007042	rbm45	96	48.238	Eptatretus_burgeri
ENSLBEG00000011642	rbm45	99	58.099	ENSEASG00005022475	RBM45	96	58.099	Equus_asinus_asinus
ENSLBEG00000011642	rbm45	99	58.099	ENSECAG00000017129	RBM45	96	58.099	Equus_caballus
ENSLBEG00000011642	rbm45	50	56.034	ENSEEUG00000001843	RBM45	92	56.034	Erinaceus_europaeus
ENSLBEG00000011642	rbm45	99	76.170	ENSELUG00000020878	-	99	76.170	Esox_lucius
ENSLBEG00000011642	rbm45	99	70.588	ENSELUG00000023238	rbm45	98	70.588	Esox_lucius
ENSLBEG00000011642	rbm45	99	58.351	ENSFCAG00000018793	RBM45	96	58.351	Felis_catus
ENSLBEG00000011642	rbm45	95	55.526	ENSFALG00000003330	RBM45	99	55.526	Ficedula_albicollis
ENSLBEG00000011642	rbm45	99	58.568	ENSFDAG00000006840	-	96	58.568	Fukomys_damarensis
ENSLBEG00000011642	rbm45	99	62.673	ENSFHEG00000012844	rbm45	99	62.673	Fundulus_heteroclitus
ENSLBEG00000011642	rbm45	99	75.161	ENSGMOG00000002427	rbm45	99	75.214	Gadus_morhua
ENSLBEG00000011642	rbm45	98	55.365	ENSGALG00000009202	RBM45	91	55.484	Gallus_gallus
ENSLBEG00000011642	rbm45	99	79.355	ENSGAFG00000003709	rbm45	99	79.355	Gambusia_affinis
ENSLBEG00000011642	rbm45	97	82.789	ENSGACG00000011659	rbm45	99	83.261	Gasterosteus_aculeatus
ENSLBEG00000011642	rbm45	85	53.218	ENSGAGG00000017616	RBM45	98	52.798	Gopherus_agassizii
ENSLBEG00000011642	rbm45	99	59.002	ENSGGOG00000013981	RBM45	96	59.002	Gorilla_gorilla
ENSLBEG00000011642	rbm45	99	84.154	ENSHBUG00000015980	rbm45	99	84.154	Haplochromis_burtoni
ENSLBEG00000011642	rbm45	99	58.351	ENSHGLG00000007342	RBM45	96	58.351	Heterocephalus_glaber_female
ENSLBEG00000011642	rbm45	99	58.810	ENSHGLG00100011482	-	97	58.810	Heterocephalus_glaber_male
ENSLBEG00000011642	rbm45	97	40.263	ENSHGLG00100007533	-	94	40.263	Heterocephalus_glaber_male
ENSLBEG00000011642	rbm45	99	77.119	ENSHCOG00000000850	rbm45	98	77.119	Hippocampus_comes
ENSLBEG00000011642	rbm45	99	70.021	ENSIPUG00000019576	RBM45	99	70.021	Ictalurus_punctatus
ENSLBEG00000011642	rbm45	99	58.785	ENSSTOG00000002708	RBM45	96	58.785	Ictidomys_tridecemlineatus
ENSLBEG00000011642	rbm45	85	57.750	ENSJJAG00000001312	Rbm45	88	57.750	Jaculus_jaculus
ENSLBEG00000011642	rbm45	99	72.765	ENSKMAG00000007636	rbm45	99	74.051	Kryptolebias_marmoratus
ENSLBEG00000011642	rbm45	98	61.017	ENSLACG00000003728	RBM45	98	61.017	Latimeria_chalumnae
ENSLBEG00000011642	rbm45	99	71.642	ENSLOCG00000006862	rbm45	99	71.642	Lepisosteus_oculatus
ENSLBEG00000011642	rbm45	96	57.480	ENSLAFG00000007464	RBM45	97	57.480	Loxodonta_africana
ENSLBEG00000011642	rbm45	99	59.219	ENSMFAG00000042524	RBM45	96	59.219	Macaca_fascicularis
ENSLBEG00000011642	rbm45	99	59.219	ENSMMUG00000002013	RBM45	96	59.219	Macaca_mulatta
ENSLBEG00000011642	rbm45	99	59.219	ENSMNEG00000029136	RBM45	96	59.219	Macaca_nemestrina
ENSLBEG00000011642	rbm45	99	59.219	ENSMLEG00000042404	RBM45	96	59.219	Mandrillus_leucophaeus
ENSLBEG00000011642	rbm45	99	87.527	ENSMAMG00000022413	rbm45	99	87.527	Mastacembelus_armatus
ENSLBEG00000011642	rbm45	99	83.940	ENSMZEG00005027295	rbm45	99	83.940	Maylandia_zebra
ENSLBEG00000011642	rbm45	95	54.856	ENSMGAG00000009496	RBM45	99	54.856	Meleagris_gallopavo
ENSLBEG00000011642	rbm45	99	57.451	ENSMAUG00000016948	Rbm45	96	57.451	Mesocricetus_auratus
ENSLBEG00000011642	rbm45	99	59.219	ENSMICG00000003787	RBM45	96	59.219	Microcebus_murinus
ENSLBEG00000011642	rbm45	99	57.359	ENSMOCG00000017295	Rbm45	96	57.359	Microtus_ochrogaster
ENSLBEG00000011642	rbm45	99	85.217	ENSMMOG00000006808	rbm45	98	85.307	Mola_mola
ENSLBEG00000011642	rbm45	99	58.134	ENSMODG00000009742	RBM45	96	58.134	Monodelphis_domestica
ENSLBEG00000011642	rbm45	99	81.538	ENSMALG00000022126	rbm45	99	81.538	Monopterus_albus
ENSLBEG00000011642	rbm45	99	57.543	MGP_CAROLIEiJ_G0023686	Rbm45	96	57.543	Mus_caroli
ENSLBEG00000011642	rbm45	99	57.974	ENSMUSG00000042369	Rbm45	96	57.974	Mus_musculus
ENSLBEG00000011642	rbm45	99	57.759	MGP_PahariEiJ_G0025137	Rbm45	96	57.759	Mus_pahari
ENSLBEG00000011642	rbm45	99	58.405	MGP_SPRETEiJ_G0024607	Rbm45	96	58.405	Mus_spretus
ENSLBEG00000011642	rbm45	99	58.099	ENSMPUG00000003205	RBM45	96	58.099	Mustela_putorius_furo
ENSLBEG00000011642	rbm45	98	46.154	ENSMLUG00000005782	RBM45	96	46.154	Myotis_lucifugus
ENSLBEG00000011642	rbm45	99	58.099	ENSNGAG00000023886	Rbm45	96	58.099	Nannospalax_galili
ENSLBEG00000011642	rbm45	99	87.845	ENSNBRG00000008816	rbm45	99	87.845	Neolamprologus_brichardi
ENSLBEG00000011642	rbm45	99	59.219	ENSNLEG00000006080	RBM45	96	59.219	Nomascus_leucogenys
ENSLBEG00000011642	rbm45	78	57.778	ENSMEUG00000007995	-	62	57.778	Notamacropus_eugenii
ENSLBEG00000011642	rbm45	80	63.717	ENSOPRG00000002626	RBM45	80	63.717	Ochotona_princeps
ENSLBEG00000011642	rbm45	99	57.667	ENSODEG00000007959	RBM45	96	57.667	Octodon_degus
ENSLBEG00000011642	rbm45	99	85.225	ENSONIG00000001450	rbm45	99	85.225	Oreochromis_niloticus
ENSLBEG00000011642	rbm45	99	57.105	ENSOANG00000008627	RBM45	99	57.105	Ornithorhynchus_anatinus
ENSLBEG00000011642	rbm45	99	58.099	ENSOCUG00000001125	RBM45	96	58.099	Oryctolagus_cuniculus
ENSLBEG00000011642	rbm45	99	80.645	ENSORLG00000024508	rbm45	99	80.645	Oryzias_latipes
ENSLBEG00000011642	rbm45	99	81.935	ENSOMEG00000015870	rbm45	99	81.935	Oryzias_melastigma
ENSLBEG00000011642	rbm45	99	58.442	ENSOGAG00000015195	RBM45	96	58.442	Otolemur_garnettii
ENSLBEG00000011642	rbm45	99	58.370	ENSOARG00000017348	RBM45	96	58.370	Ovis_aries
ENSLBEG00000011642	rbm45	99	58.747	ENSPPAG00000026278	RBM45	96	58.747	Pan_paniscus
ENSLBEG00000011642	rbm45	99	58.170	ENSPPRG00000017073	RBM45	96	58.170	Panthera_pardus
ENSLBEG00000011642	rbm45	99	58.170	ENSPTIG00000021277	RBM45	96	58.170	Panthera_tigris_altaica
ENSLBEG00000011642	rbm45	99	59.002	ENSPTRG00000012686	RBM45	96	59.002	Pan_troglodytes
ENSLBEG00000011642	rbm45	99	59.219	ENSPANG00000016088	RBM45	96	59.219	Papio_anubis
ENSLBEG00000011642	rbm45	99	71.368	ENSPKIG00000000284	rbm45	99	71.368	Paramormyrops_kingsleyae
ENSLBEG00000011642	rbm45	86	53.258	ENSPSIG00000002884	RBM45	99	53.258	Pelodiscus_sinensis
ENSLBEG00000011642	rbm45	99	69.742	ENSPMGG00000001551	rbm45	99	69.742	Periophthalmus_magnuspinnatus
ENSLBEG00000011642	rbm45	99	57.235	ENSPEMG00000002470	Rbm45	96	57.235	Peromyscus_maniculatus_bairdii
ENSLBEG00000011642	rbm45	98	49.465	ENSPMAG00000002965	rbm45	98	49.465	Petromyzon_marinus
ENSLBEG00000011642	rbm45	99	58.568	ENSPCIG00000025402	RBM45	96	58.568	Phascolarctos_cinereus
ENSLBEG00000011642	rbm45	99	79.355	ENSPFOG00000006641	rbm45	99	79.355	Poecilia_formosa
ENSLBEG00000011642	rbm45	99	79.355	ENSPLAG00000010571	rbm45	99	79.355	Poecilia_latipinna
ENSLBEG00000011642	rbm45	99	79.355	ENSPMEG00000001067	rbm45	99	79.355	Poecilia_mexicana
ENSLBEG00000011642	rbm45	99	79.140	ENSPREG00000004579	rbm45	99	79.140	Poecilia_reticulata
ENSLBEG00000011642	rbm45	99	59.002	ENSPPYG00000012974	RBM45	96	59.002	Pongo_abelii
ENSLBEG00000011642	rbm45	70	66.019	ENSPCAG00000004338	RBM45	68	66.019	Procavia_capensis
ENSLBEG00000011642	rbm45	99	59.219	ENSPCOG00000021526	RBM45	96	59.219	Propithecus_coquereli
ENSLBEG00000011642	rbm45	99	58.568	ENSPVAG00000010390	RBM45	96	58.568	Pteropus_vampyrus
ENSLBEG00000011642	rbm45	99	73.469	ENSPNYG00000010755	rbm45	99	73.469	Pundamilia_nyererei
ENSLBEG00000011642	rbm45	99	71.368	ENSPNAG00000021750	rbm45	99	71.368	Pygocentrus_nattereri
ENSLBEG00000011642	rbm45	99	57.792	ENSRNOG00000010595	Rbm45	96	57.792	Rattus_norvegicus
ENSLBEG00000011642	rbm45	99	59.002	ENSRBIG00000033680	RBM45	96	59.002	Rhinopithecus_bieti
ENSLBEG00000011642	rbm45	99	59.002	ENSRROG00000031398	RBM45	96	59.002	Rhinopithecus_roxellana
ENSLBEG00000011642	rbm45	99	59.219	ENSSBOG00000005469	RBM45	96	59.219	Saimiri_boliviensis_boliviensis
ENSLBEG00000011642	rbm45	99	57.218	ENSSHAG00000005667	RBM45	99	57.218	Sarcophilus_harrisii
ENSLBEG00000011642	rbm45	99	71.581	ENSSFOG00015012262	rbm45	99	71.581	Scleropages_formosus
ENSLBEG00000011642	rbm45	92	86.480	ENSSMAG00000001822	rbm45	96	86.480	Scophthalmus_maximus
ENSLBEG00000011642	rbm45	99	89.462	ENSSDUG00000014461	rbm45	99	89.462	Seriola_dumerili
ENSLBEG00000011642	rbm45	99	89.247	ENSSLDG00000017621	rbm45	99	89.247	Seriola_lalandi_dorsalis
ENSLBEG00000011642	rbm45	98	46.336	ENSSARG00000001516	RBM45	96	46.336	Sorex_araneus
ENSLBEG00000011642	rbm45	98	53.362	ENSSPUG00000005740	RBM45	90	53.362	Sphenodon_punctatus
ENSLBEG00000011642	rbm45	99	86.555	ENSSPAG00000023188	rbm45	99	86.555	Stegastes_partitus
ENSLBEG00000011642	rbm45	99	66.029	ENSSSCG00000015996	RBM45	96	66.029	Sus_scrofa
ENSLBEG00000011642	rbm45	63	57.018	ENSTGUG00000015654	-	99	57.018	Taeniopygia_guttata
ENSLBEG00000011642	rbm45	98	55.388	ENSTGUG00000009116	-	94	55.388	Taeniopygia_guttata
ENSLBEG00000011642	rbm45	99	80.645	ENSTRUG00000005485	rbm45	99	80.645	Takifugu_rubripes
ENSLBEG00000011642	rbm45	99	76.050	ENSTNIG00000009859	rbm45	99	76.050	Tetraodon_nigroviridis
ENSLBEG00000011642	rbm45	70	49.225	ENSTBEG00000014236	-	100	49.225	Tupaia_belangeri
ENSLBEG00000011642	rbm45	98	51.193	ENSTTRG00000007653	RBM45	96	51.193	Tursiops_truncatus
ENSLBEG00000011642	rbm45	99	58.351	ENSUAMG00000012989	RBM45	96	58.351	Ursus_americanus
ENSLBEG00000011642	rbm45	99	58.553	ENSUMAG00000016503	RBM45	98	57.634	Ursus_maritimus
ENSLBEG00000011642	rbm45	70	57.669	ENSVPAG00000001558	RBM45	95	57.669	Vicugna_pacos
ENSLBEG00000011642	rbm45	99	57.883	ENSVVUG00000010078	RBM45	96	57.883	Vulpes_vulpes
ENSLBEG00000011642	rbm45	97	57.741	ENSXETG00000015007	rbm45	97	57.741	Xenopus_tropicalis
ENSLBEG00000011642	rbm45	99	75.914	ENSXCOG00000014247	rbm45	99	75.914	Xiphophorus_couchianus
ENSLBEG00000011642	rbm45	99	78.925	ENSXMAG00000026302	rbm45	99	78.925	Xiphophorus_maculatus