EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011647 (Gene tree)
Gene ID: 109998125
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5600 bases
Position: chrFKLU01000463.1:327218-332817
Accession: 109998125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000014921	RRM_1	PF00076.22	4.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000015829	PABPN1L-201	3527	XM_020652862	ENSLBEP00000014921	274 (aa)	XP_020508518	UPI0009B43308

Gene Model

Click here to download ENSLBEG00000011647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011647's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011647	PABPN1L	68	57.949	ENSLBEG00000027266	pabpn1	63	60.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011647	PABPN1L	69	51.980	ENSG00000205022	PABPN1L	58	52.761	Homo_sapiens
ENSLBEG00000011647	PABPN1L	88	92.975	ENSAPOG00000000685	PABPN1L	78	86.364	Acanthochromis_polyacanthus
ENSLBEG00000011647	PABPN1L	88	85.062	ENSACIG00000021400	PABPN1L	98	79.253	Amphilophus_citrinellus
ENSLBEG00000011647	PABPN1L	97	90.943	ENSAOCG00000019844	PABPN1L	100	88.679	Amphiprion_ocellaris
ENSLBEG00000011647	PABPN1L	97	90.566	ENSAPEG00000019534	PABPN1L	100	88.302	Amphiprion_percula
ENSLBEG00000011647	PABPN1L	90	90.244	ENSATEG00000011646	PABPN1L	95	88.382	Anabas_testudineus
ENSLBEG00000011647	PABPN1L	55	59.603	ENSACAG00000013250	PABPN1L	74	57.931	Anolis_carolinensis
ENSLBEG00000011647	PABPN1L	69	52.239	ENSANAG00000038178	PABPN1L	58	55.901	Aotus_nancymaae
ENSLBEG00000011647	PABPN1L	97	88.679	ENSACLG00000025147	PABPN1L	100	85.283	Astatotilapia_calliptera
ENSLBEG00000011647	PABPN1L	53	72.414	ENSAMXG00000010873	PABPN1L	55	70.345	Astyanax_mexicanus
ENSLBEG00000011647	PABPN1L	60	45.509	ENSBTAG00000023752	-	57	44.375	Bos_taurus
ENSLBEG00000011647	PABPN1L	69	53.266	ENSCJAG00000045284	PABPN1L	60	51.534	Callithrix_jacchus
ENSLBEG00000011647	PABPN1L	69	46.114	ENSCPOG00000025951	PABPN1L	59	48.466	Cavia_porcellus
ENSLBEG00000011647	PABPN1L	69	52.427	ENSCCAG00000027631	PABPN1L	58	54.545	Cebus_capucinus
ENSLBEG00000011647	PABPN1L	69	52.451	ENSCATG00000031060	PABPN1L	59	53.374	Cercocebus_atys
ENSLBEG00000011647	PABPN1L	56	49.068	ENSCLAG00000000704	PABPN1L	64	45.251	Chinchilla_lanigera
ENSLBEG00000011647	PABPN1L	69	47.500	ENSCGRG00001013211	Pabpn1l	64	47.727	Cricetulus_griseus_chok1gshd
ENSLBEG00000011647	PABPN1L	69	47.500	ENSCGRG00000015868	Pabpn1l	64	47.727	Cricetulus_griseus_crigri
ENSLBEG00000011647	PABPN1L	97	82.331	ENSCSEG00000001142	pabpn1l	100	80.827	Cynoglossus_semilaevis
ENSLBEG00000011647	PABPN1L	97	87.547	ENSCVAG00000015547	PABPN1L	100	85.660	Cyprinodon_variegatus
ENSLBEG00000011647	PABPN1L	56	52.941	ENSDNOG00000034677	PABPN1L	67	49.180	Dasypus_novemcinctus
ENSLBEG00000011647	PABPN1L	60	51.724	ENSEASG00005000777	PABPN1L	61	50.595	Equus_asinus_asinus
ENSLBEG00000011647	PABPN1L	60	51.724	ENSECAG00000000378	PABPN1L	61	50.000	Equus_caballus
ENSLBEG00000011647	PABPN1L	96	64.528	ENSELUG00000018385	PABPN1L	99	64.151	Esox_lucius
ENSLBEG00000011647	PABPN1L	60	52.047	ENSFCAG00000010465	PABPN1L	59	49.080	Felis_catus
ENSLBEG00000011647	PABPN1L	67	57.143	ENSFALG00000003319	PABPN1L	61	56.579	Ficedula_albicollis
ENSLBEG00000011647	PABPN1L	56	53.459	ENSFDAG00000021067	PABPN1L	60	49.383	Fukomys_damarensis
ENSLBEG00000011647	PABPN1L	97	86.792	ENSFHEG00000018295	PABPN1L	100	84.528	Fundulus_heteroclitus
ENSLBEG00000011647	PABPN1L	97	76.580	ENSGMOG00000001475	PABPN1L	100	71.375	Gadus_morhua
ENSLBEG00000011647	PABPN1L	60	56.471	ENSGALG00000006242	PABPN1L	66	60.684	Gallus_gallus
ENSLBEG00000011647	PABPN1L	97	87.170	ENSGAFG00000012565	PABPN1L	100	85.283	Gambusia_affinis
ENSLBEG00000011647	PABPN1L	97	84.015	ENSGACG00000015428	PABPN1L	100	81.784	Gasterosteus_aculeatus
ENSLBEG00000011647	PABPN1L	69	51.456	ENSGGOG00000012670	PABPN1L	59	52.695	Gorilla_gorilla
ENSLBEG00000011647	PABPN1L	97	89.434	ENSHBUG00000002388	PABPN1L	100	85.660	Haplochromis_burtoni
ENSLBEG00000011647	PABPN1L	66	47.644	ENSHGLG00000014207	PABPN1L	75	45.361	Heterocephalus_glaber_female
ENSLBEG00000011647	PABPN1L	66	47.644	ENSHGLG00100005230	PABPN1L	75	45.361	Heterocephalus_glaber_male
ENSLBEG00000011647	PABPN1L	97	80.882	ENSHCOG00000004151	PABPN1L	100	80.882	Hippocampus_comes
ENSLBEG00000011647	PABPN1L	65	63.388	ENSIPUG00000023583	PABPN1L	73	68.212	Ictalurus_punctatus
ENSLBEG00000011647	PABPN1L	73	45.972	ENSJJAG00000006433	Pabpn1l	63	48.256	Jaculus_jaculus
ENSLBEG00000011647	PABPN1L	79	86.636	ENSKMAG00000001112	PABPN1L	95	84.259	Kryptolebias_marmoratus
ENSLBEG00000011647	PABPN1L	69	53.365	ENSMFAG00000002924	PABPN1L	59	54.491	Macaca_fascicularis
ENSLBEG00000011647	PABPN1L	69	53.140	ENSMMUG00000012438	PABPN1L	59	53.614	Macaca_mulatta
ENSLBEG00000011647	PABPN1L	69	53.365	ENSMNEG00000044808	PABPN1L	59	54.491	Macaca_nemestrina
ENSLBEG00000011647	PABPN1L	69	51.923	ENSMLEG00000032667	PABPN1L	59	53.892	Mandrillus_leucophaeus
ENSLBEG00000011647	PABPN1L	97	88.679	ENSMZEG00005002186	PABPN1L	100	85.283	Maylandia_zebra
ENSLBEG00000011647	PABPN1L	60	50.299	ENSMAUG00000014032	Pabpn1l	67	46.591	Mesocricetus_auratus
ENSLBEG00000011647	PABPN1L	69	49.020	ENSMICG00000028179	PABPN1L	59	50.307	Microcebus_murinus
ENSLBEG00000011647	PABPN1L	73	90.500	ENSMMOG00000017714	PABPN1L	86	88.000	Mola_mola
ENSLBEG00000011647	PABPN1L	97	85.283	ENSMALG00000016926	PABPN1L	100	84.151	Monopterus_albus
ENSLBEG00000011647	PABPN1L	63	49.180	MGP_PahariEiJ_G0023268	Pabpn1l	64	46.857	Mus_pahari
ENSLBEG00000011647	PABPN1L	69	43.836	ENSNGAG00000023992	Pabpn1l	64	46.286	Nannospalax_galili
ENSLBEG00000011647	PABPN1L	88	89.583	ENSNBRG00000017078	PABPN1L	100	85.833	Neolamprologus_brichardi
ENSLBEG00000011647	PABPN1L	66	48.990	ENSOPRG00000005597	PABPN1L	59	50.920	Ochotona_princeps
ENSLBEG00000011647	PABPN1L	97	83.396	ENSORLG00000026560	PABPN1L	100	79.245	Oryzias_latipes
ENSLBEG00000011647	PABPN1L	97	83.019	ENSORLG00020015068	PABPN1L	100	78.868	Oryzias_latipes_hni
ENSLBEG00000011647	PABPN1L	97	83.396	ENSORLG00015000397	PABPN1L	100	79.245	Oryzias_latipes_hsok
ENSLBEG00000011647	PABPN1L	99	79.779	ENSOMEG00000017896	PABPN1L	74	76.471	Oryzias_melastigma
ENSLBEG00000011647	PABPN1L	70	48.341	ENSOGAG00000000433	PABPN1L	57	48.555	Otolemur_garnettii
ENSLBEG00000011647	PABPN1L	69	52.475	ENSPPAG00000028866	PABPN1L	58	53.374	Pan_paniscus
ENSLBEG00000011647	PABPN1L	60	52.047	ENSPPRG00000015106	PABPN1L	59	49.080	Panthera_pardus
ENSLBEG00000011647	PABPN1L	62	51.744	ENSPTIG00000015606	PABPN1L	61	50.314	Panthera_tigris_altaica
ENSLBEG00000011647	PABPN1L	69	52.475	ENSPTRG00000031120	PABPN1L	58	53.374	Pan_troglodytes
ENSLBEG00000011647	PABPN1L	69	51.923	ENSPANG00000026039	PABPN1L	59	52.410	Papio_anubis
ENSLBEG00000011647	PABPN1L	57	64.151	ENSPSIG00000003404	PABPN1L	76	59.732	Pelodiscus_sinensis
ENSLBEG00000011647	PABPN1L	78	88.837	ENSPMGG00000013927	PABPN1L	95	83.333	Periophthalmus_magnuspinnatus
ENSLBEG00000011647	PABPN1L	63	50.000	ENSPEMG00000016624	Pabpn1l	65	48.571	Peromyscus_maniculatus_bairdii
ENSLBEG00000011647	PABPN1L	97	87.547	ENSPFOG00000007001	PABPN1L	100	85.660	Poecilia_formosa
ENSLBEG00000011647	PABPN1L	97	87.547	ENSPLAG00000018431	PABPN1L	100	85.660	Poecilia_latipinna
ENSLBEG00000011647	PABPN1L	66	79.570	ENSPMEG00000000169	-	91	80.645	Poecilia_mexicana
ENSLBEG00000011647	PABPN1L	97	87.547	ENSPMEG00000009108	PABPN1L	100	85.660	Poecilia_mexicana
ENSLBEG00000011647	PABPN1L	85	87.554	ENSPREG00000022533	PABPN1L	93	85.185	Poecilia_reticulata
ENSLBEG00000011647	PABPN1L	69	51.456	ENSPPYG00000007655	PABPN1L	58	53.293	Pongo_abelii
ENSLBEG00000011647	PABPN1L	69	48.259	ENSPCOG00000024077	PABPN1L	58	51.250	Propithecus_coquereli
ENSLBEG00000011647	PABPN1L	60	53.846	ENSPVAG00000002716	PABPN1L	58	51.534	Pteropus_vampyrus
ENSLBEG00000011647	PABPN1L	97	88.679	ENSPNYG00000004803	PABPN1L	100	85.283	Pundamilia_nyererei
ENSLBEG00000011647	PABPN1L	69	50.718	ENSRBIG00000030740	PABPN1L	59	51.497	Rhinopithecus_bieti
ENSLBEG00000011647	PABPN1L	69	50.718	ENSRROG00000032240	-	59	51.497	Rhinopithecus_roxellana
ENSLBEG00000011647	PABPN1L	70	52.632	ENSRROG00000035483	-	59	52.695	Rhinopithecus_roxellana
ENSLBEG00000011647	PABPN1L	69	51.980	ENSSBOG00000018410	PABPN1L	58	52.761	Saimiri_boliviensis_boliviensis
ENSLBEG00000011647	PABPN1L	97	86.245	ENSSMAG00000021348	PABPN1L	100	89.591	Scophthalmus_maximus
ENSLBEG00000011647	PABPN1L	97	90.943	ENSSDUG00000006986	PABPN1L	100	88.679	Seriola_dumerili
ENSLBEG00000011647	PABPN1L	97	91.321	ENSSLDG00000021845	PABPN1L	100	89.057	Seriola_lalandi_dorsalis
ENSLBEG00000011647	PABPN1L	97	92.830	ENSSPAG00000017978	PABPN1L	100	88.679	Stegastes_partitus
ENSLBEG00000011647	PABPN1L	66	49.468	ENSSSCG00000036367	PABPN1L	63	48.023	Sus_scrofa
ENSLBEG00000011647	PABPN1L	97	78.491	ENSTRUG00000024725	PABPN1L	100	76.604	Takifugu_rubripes
ENSLBEG00000011647	PABPN1L	71	89.691	ENSTNIG00000009416	PABPN1L	100	87.629	Tetraodon_nigroviridis
ENSLBEG00000011647	PABPN1L	58	53.846	ENSXETG00000011258	pabpn1l	77	51.497	Xenopus_tropicalis
ENSLBEG00000011647	PABPN1L	76	87.560	ENSXCOG00000003254	PABPN1L	93	84.722	Xiphophorus_couchianus
ENSLBEG00000011647	PABPN1L	78	82.791	ENSXMAG00000029090	PABPN1L	95	80.093	Xiphophorus_maculatus