EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011683 (Gene tree)
Gene ID: 109993629
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4920 bases
Position: chrFKLU01000264.1:52838-57757
Accession: 109993629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015003	RRM_1	PF00076.22	1.6e-23	1	2
ENSLBEP00000015003	RRM_1	PF00076.22	1.6e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000015912	-	2689	XM_020646634	ENSLBEP00000015003	313 (aa)	XP_020502290	UPI0009B488C0

Gene Model

Click here to download ENSLBEG00000011683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011683	trnau1apa	93	42.593	ENSLBEG00000020480	trnau1apb	95	43.210
ENSLBEG00000011683	trnau1apa	57	30.601	ENSLBEG00000000122	-	60	30.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011683	trnau1apa	93	59.864	ENSG00000180098	TRNAU1AP	95	60.751	Homo_sapiens
ENSLBEG00000011683	trnau1apa	100	78.750	ENSAPOG00000007148	TRNAU1AP	100	79.937	Acanthochromis_polyacanthus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSAMEG00000011367	TRNAU1AP	95	61.092	Ailuropoda_melanoleuca
ENSLBEG00000011683	trnau1apa	100	82.803	ENSACIG00000004161	trnau1apa	93	90.426	Amphilophus_citrinellus
ENSLBEG00000011683	trnau1apa	100	82.704	ENSAOCG00000008056	trnau1apa	100	82.019	Amphiprion_ocellaris
ENSLBEG00000011683	trnau1apa	100	82.704	ENSAPEG00000008868	trnau1apa	100	82.019	Amphiprion_percula
ENSLBEG00000011683	trnau1apa	100	83.648	ENSATEG00000012140	trnau1apa	100	83.962	Anabas_testudineus
ENSLBEG00000011683	trnau1apa	92	59.322	ENSAPLG00000002606	TRNAU1AP	99	60.825	Anas_platyrhynchos
ENSLBEG00000011683	trnau1apa	92	48.986	ENSACAG00000003995	-	94	49.828	Anolis_carolinensis
ENSLBEG00000011683	trnau1apa	69	38.813	ENSACAG00000004205	-	83	39.224	Anolis_carolinensis
ENSLBEG00000011683	trnau1apa	93	59.864	ENSANAG00000018976	TRNAU1AP	95	60.751	Aotus_nancymaae
ENSLBEG00000011683	trnau1apa	100	81.962	ENSACLG00000018515	trnau1apa	100	80.952	Astatotilapia_calliptera
ENSLBEG00000011683	trnau1apa	92	70.968	ENSAMXG00000029240	-	95	70.968	Astyanax_mexicanus
ENSLBEG00000011683	trnau1apa	99	53.822	ENSAMXG00000013750	trnau1apa	97	52.866	Astyanax_mexicanus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSBTAG00000010393	TRNAU1AP	95	60.751	Bos_taurus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSCJAG00000009717	TRNAU1AP	95	60.751	Callithrix_jacchus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSCAFG00000011735	TRNAU1AP	95	60.751	Canis_familiaris
ENSLBEG00000011683	trnau1apa	93	59.864	ENSCAFG00020023584	TRNAU1AP	95	60.751	Canis_lupus_dingo
ENSLBEG00000011683	trnau1apa	93	59.864	ENSCHIG00000023215	TRNAU1AP	95	60.751	Capra_hircus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSTSYG00000003506	TRNAU1AP	95	60.751	Carlito_syrichta
ENSLBEG00000011683	trnau1apa	93	59.864	ENSCPOG00000001925	TRNAU1AP	95	60.751	Cavia_porcellus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSCCAG00000037506	TRNAU1AP	95	60.751	Cebus_capucinus
ENSLBEG00000011683	trnau1apa	93	59.524	ENSCATG00000044617	TRNAU1AP	95	60.410	Cercocebus_atys
ENSLBEG00000011683	trnau1apa	93	59.864	ENSCLAG00000008223	TRNAU1AP	95	60.751	Chinchilla_lanigera
ENSLBEG00000011683	trnau1apa	93	59.524	ENSCSAG00000001014	TRNAU1AP	95	60.410	Chlorocebus_sabaeus
ENSLBEG00000011683	trnau1apa	90	60.071	ENSCPBG00000000121	TRNAU1AP	96	60.284	Chrysemys_picta_bellii
ENSLBEG00000011683	trnau1apa	70	31.667	ENSCSAVG00000011781	-	86	47.024	Ciona_savignyi
ENSLBEG00000011683	trnau1apa	93	51.701	ENSCANG00000041949	TRNAU1AP	93	57.778	Colobus_angolensis_palliatus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSCGRG00001004713	Trnau1ap	95	60.751	Cricetulus_griseus_chok1gshd
ENSLBEG00000011683	trnau1apa	93	59.864	ENSCGRG00000014532	Trnau1ap	95	60.751	Cricetulus_griseus_crigri
ENSLBEG00000011683	trnau1apa	100	74.295	ENSCSEG00000006663	trnau1apa	100	74.608	Cynoglossus_semilaevis
ENSLBEG00000011683	trnau1apa	99	73.817	ENSCVAG00000018069	trnau1apa	99	75.079	Cyprinodon_variegatus
ENSLBEG00000011683	trnau1apa	99	50.159	ENSDARG00000101323	trnau1apa	95	48.910	Danio_rerio
ENSLBEG00000011683	trnau1apa	93	59.864	ENSDNOG00000033009	TRNAU1AP	95	60.751	Dasypus_novemcinctus
ENSLBEG00000011683	trnau1apa	57	59.444	ENSDNOG00000047959	-	90	59.444	Dasypus_novemcinctus
ENSLBEG00000011683	trnau1apa	93	56.849	ENSDORG00000006349	Trnau1ap	97	60.996	Dipodomys_ordii
ENSLBEG00000011683	trnau1apa	93	34.139	FBgn0031607	CG15440	96	33.333	Drosophila_melanogaster
ENSLBEG00000011683	trnau1apa	78	58.537	ENSETEG00000012594	TRNAU1AP	94	59.592	Echinops_telfairi
ENSLBEG00000011683	trnau1apa	60	46.237	ENSEBUG00000006349	-	63	46.237	Eptatretus_burgeri
ENSLBEG00000011683	trnau1apa	93	59.864	ENSEASG00005010062	TRNAU1AP	95	60.751	Equus_asinus_asinus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSECAG00000012980	TRNAU1AP	95	60.751	Equus_caballus
ENSLBEG00000011683	trnau1apa	93	75.269	ENSELUG00000022790	-	93	75.269	Esox_lucius
ENSLBEG00000011683	trnau1apa	100	72.393	ENSELUG00000017686	trnau1apa	100	75.394	Esox_lucius
ENSLBEG00000011683	trnau1apa	93	59.864	ENSFCAG00000013401	TRNAU1AP	95	60.751	Felis_catus
ENSLBEG00000011683	trnau1apa	90	59.717	ENSFALG00000001371	TRNAU1AP	96	60.284	Ficedula_albicollis
ENSLBEG00000011683	trnau1apa	93	59.864	ENSFDAG00000018599	TRNAU1AP	95	60.751	Fukomys_damarensis
ENSLBEG00000011683	trnau1apa	78	83.468	ENSFHEG00000018232	trnau1apa	86	80.075	Fundulus_heteroclitus
ENSLBEG00000011683	trnau1apa	100	65.506	ENSGMOG00000016508	trnau1apa	99	68.770	Gadus_morhua
ENSLBEG00000011683	trnau1apa	68	41.860	ENSGALG00000012721	C2H6orf52	90	39.080	Gallus_gallus
ENSLBEG00000011683	trnau1apa	93	59.184	ENSGALG00000001310	-	95	60.884	Gallus_gallus
ENSLBEG00000011683	trnau1apa	78	81.633	ENSGAFG00000004928	trnau1apa	91	83.401	Gambusia_affinis
ENSLBEG00000011683	trnau1apa	100	83.228	ENSGACG00000001443	trnau1apa	100	82.540	Gasterosteus_aculeatus
ENSLBEG00000011683	trnau1apa	90	59.364	ENSGAGG00000004940	TRNAU1AP	96	60.284	Gopherus_agassizii
ENSLBEG00000011683	trnau1apa	93	59.864	ENSGGOG00000003511	TRNAU1AP	95	60.751	Gorilla_gorilla
ENSLBEG00000011683	trnau1apa	100	92.143	ENSHBUG00000002510	trnau1apa	100	82.540	Haplochromis_burtoni
ENSLBEG00000011683	trnau1apa	93	59.864	ENSHGLG00000010380	TRNAU1AP	95	60.751	Heterocephalus_glaber_female
ENSLBEG00000011683	trnau1apa	93	57.823	ENSHGLG00100012699	TRNAU1AP	95	58.703	Heterocephalus_glaber_male
ENSLBEG00000011683	trnau1apa	99	74.286	ENSHCOG00000014770	trnau1apa	99	72.930	Hippocampus_comes
ENSLBEG00000011683	trnau1apa	93	59.864	ENSSTOG00000000079	TRNAU1AP	95	60.751	Ictidomys_tridecemlineatus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSJJAG00000010128	Trnau1ap	95	60.751	Jaculus_jaculus
ENSLBEG00000011683	trnau1apa	100	78.056	ENSKMAG00000001230	trnau1apa	100	78.302	Kryptolebias_marmoratus
ENSLBEG00000011683	trnau1apa	94	52.174	ENSLACG00000005541	TRNAU1AP	95	53.401	Latimeria_chalumnae
ENSLBEG00000011683	trnau1apa	98	58.576	ENSLOCG00000004041	trnau1apa	96	59.524	Lepisosteus_oculatus
ENSLBEG00000011683	trnau1apa	93	60.204	ENSLAFG00000007628	TRNAU1AP	95	61.092	Loxodonta_africana
ENSLBEG00000011683	trnau1apa	93	67.857	ENSMFAG00000043751	TRNAU1AP	95	60.410	Macaca_fascicularis
ENSLBEG00000011683	trnau1apa	93	59.524	ENSMMUG00000006561	TRNAU1AP	95	60.410	Macaca_mulatta
ENSLBEG00000011683	trnau1apa	93	67.857	ENSMNEG00000044201	TRNAU1AP	95	60.410	Macaca_nemestrina
ENSLBEG00000011683	trnau1apa	93	67.857	ENSMLEG00000015649	TRNAU1AP	95	60.410	Mandrillus_leucophaeus
ENSLBEG00000011683	trnau1apa	99	82.390	ENSMAMG00000001247	trnau1apa	99	82.704	Mastacembelus_armatus
ENSLBEG00000011683	trnau1apa	100	81.962	ENSMZEG00005017722	trnau1apa	100	80.952	Maylandia_zebra
ENSLBEG00000011683	trnau1apa	91	59.233	ENSMGAG00000002105	TRNAU1AP	96	60.976	Meleagris_gallopavo
ENSLBEG00000011683	trnau1apa	93	59.864	ENSMICG00000008386	TRNAU1AP	95	60.751	Microcebus_murinus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSMOCG00000011189	Trnau1ap	95	60.751	Microtus_ochrogaster
ENSLBEG00000011683	trnau1apa	100	69.620	ENSMMOG00000012107	trnau1apa	99	69.937	Mola_mola
ENSLBEG00000011683	trnau1apa	93	59.864	ENSMODG00000010927	TRNAU1AP	95	59.044	Monodelphis_domestica
ENSLBEG00000011683	trnau1apa	100	82.075	ENSMALG00000016778	trnau1apa	100	82.390	Monopterus_albus
ENSLBEG00000011683	trnau1apa	93	59.524	MGP_CAROLIEiJ_G0026563	Trnau1ap	95	60.410	Mus_caroli
ENSLBEG00000011683	trnau1apa	93	59.524	ENSMUSG00000028898	Trnau1ap	95	60.410	Mus_musculus
ENSLBEG00000011683	trnau1apa	93	59.524	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSLBEG00000011683	trnau1apa	93	59.524	MGP_SPRETEiJ_G0027544	Trnau1ap	95	60.410	Mus_spretus
ENSLBEG00000011683	trnau1apa	99	58.013	ENSMPUG00000015511	TRNAU1AP	95	61.092	Mustela_putorius_furo
ENSLBEG00000011683	trnau1apa	93	59.864	ENSMLUG00000012586	TRNAU1AP	95	60.751	Myotis_lucifugus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSNGAG00000015881	Trnau1ap	95	60.751	Nannospalax_galili
ENSLBEG00000011683	trnau1apa	100	71.019	ENSNBRG00000001758	trnau1apa	99	71.338	Neolamprologus_brichardi
ENSLBEG00000011683	trnau1apa	93	67.857	ENSNLEG00000009822	TRNAU1AP	95	60.751	Nomascus_leucogenys
ENSLBEG00000011683	trnau1apa	91	59.233	ENSMEUG00000006117	TRNAU1AP	96	58.885	Notamacropus_eugenii
ENSLBEG00000011683	trnau1apa	53	64.384	ENSOPRG00000007084	-	55	61.250	Ochotona_princeps
ENSLBEG00000011683	trnau1apa	93	59.864	ENSODEG00000002970	TRNAU1AP	95	60.751	Octodon_degus
ENSLBEG00000011683	trnau1apa	81	82.812	ENSONIG00000004715	trnau1apa	97	81.569	Oreochromis_niloticus
ENSLBEG00000011683	trnau1apa	93	45.578	ENSOANG00000005325	-	95	46.575	Ornithorhynchus_anatinus
ENSLBEG00000011683	trnau1apa	93	51.361	ENSOCUG00000002353	-	95	50.340	Oryctolagus_cuniculus
ENSLBEG00000011683	trnau1apa	86	47.601	ENSOCUG00000006834	-	98	47.601	Oryctolagus_cuniculus
ENSLBEG00000011683	trnau1apa	93	58.503	ENSOCUG00000011704	-	95	59.386	Oryctolagus_cuniculus
ENSLBEG00000011683	trnau1apa	100	77.215	ENSORLG00000010428	trnau1apa	100	76.899	Oryzias_latipes
ENSLBEG00000011683	trnau1apa	100	77.215	ENSORLG00020000926	trnau1ap	100	76.899	Oryzias_latipes_hni
ENSLBEG00000011683	trnau1apa	100	77.215	ENSORLG00015009858	trnau1ap	100	76.899	Oryzias_latipes_hsok
ENSLBEG00000011683	trnau1apa	100	76.582	ENSOMEG00000007873	trnau1apa	100	76.266	Oryzias_melastigma
ENSLBEG00000011683	trnau1apa	93	59.864	ENSOGAG00000002274	TRNAU1AP	95	60.751	Otolemur_garnettii
ENSLBEG00000011683	trnau1apa	93	59.864	ENSOARG00000002843	TRNAU1AP	95	60.751	Ovis_aries
ENSLBEG00000011683	trnau1apa	93	59.864	ENSPPAG00000033927	TRNAU1AP	95	60.751	Pan_paniscus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSPPRG00000004416	TRNAU1AP	95	60.751	Panthera_pardus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSPTIG00000016677	TRNAU1AP	95	60.751	Panthera_tigris_altaica
ENSLBEG00000011683	trnau1apa	86	51.481	ENSPTRG00000000434	-	90	53.025	Pan_troglodytes
ENSLBEG00000011683	trnau1apa	93	59.524	ENSPANG00000016019	TRNAU1AP	95	60.410	Papio_anubis
ENSLBEG00000011683	trnau1apa	93	75.269	ENSPKIG00000022205	-	95	75.269	Paramormyrops_kingsleyae
ENSLBEG00000011683	trnau1apa	93	59.933	ENSPKIG00000015511	trnau1apa	93	59.122	Paramormyrops_kingsleyae
ENSLBEG00000011683	trnau1apa	90	60.424	ENSPSIG00000006864	TRNAU1AP	96	60.284	Pelodiscus_sinensis
ENSLBEG00000011683	trnau1apa	97	67.763	ENSPMGG00000023893	trnau1apa	99	64.423	Periophthalmus_magnuspinnatus
ENSLBEG00000011683	trnau1apa	93	59.524	ENSPEMG00000007877	Trnau1ap	95	60.410	Peromyscus_maniculatus_bairdii
ENSLBEG00000011683	trnau1apa	57	51.381	ENSPMAG00000000592	trnau1apa	97	51.381	Petromyzon_marinus
ENSLBEG00000011683	trnau1apa	74	51.502	ENSPMAG00000005934	trnau1apa	96	51.502	Petromyzon_marinus
ENSLBEG00000011683	trnau1apa	99	76.752	ENSPFOG00000008100	trnau1apa	99	76.972	Poecilia_formosa
ENSLBEG00000011683	trnau1apa	96	75.828	ENSPLAG00000010236	trnau1apa	99	76.066	Poecilia_latipinna
ENSLBEG00000011683	trnau1apa	99	74.760	ENSPMEG00000016387	trnau1apa	97	75.000	Poecilia_mexicana
ENSLBEG00000011683	trnau1apa	89	79.000	ENSPREG00000019821	trnau1apa	99	79.000	Poecilia_reticulata
ENSLBEG00000011683	trnau1apa	84	51.311	ENSPPYG00000001639	-	95	52.256	Pongo_abelii
ENSLBEG00000011683	trnau1apa	93	59.864	ENSPCOG00000027712	-	95	60.751	Propithecus_coquereli
ENSLBEG00000011683	trnau1apa	92	48.443	ENSPCOG00000023470	-	95	49.827	Propithecus_coquereli
ENSLBEG00000011683	trnau1apa	93	59.864	ENSPVAG00000017214	TRNAU1AP	95	60.751	Pteropus_vampyrus
ENSLBEG00000011683	trnau1apa	100	83.544	ENSPNYG00000010130	trnau1apa	99	83.969	Pundamilia_nyererei
ENSLBEG00000011683	trnau1apa	99	51.118	ENSPNAG00000024905	trnau1apa	97	51.282	Pygocentrus_nattereri
ENSLBEG00000011683	trnau1apa	92	53.793	ENSRNOG00000055344	Trnau1ap	92	54.671	Rattus_norvegicus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSRBIG00000029083	TRNAU1AP	95	60.751	Rhinopithecus_bieti
ENSLBEG00000011683	trnau1apa	93	59.864	ENSRROG00000029128	TRNAU1AP	95	60.751	Rhinopithecus_roxellana
ENSLBEG00000011683	trnau1apa	93	59.864	ENSSBOG00000021299	TRNAU1AP	95	60.751	Saimiri_boliviensis_boliviensis
ENSLBEG00000011683	trnau1apa	93	59.864	ENSSHAG00000008108	TRNAU1AP	95	59.044	Sarcophilus_harrisii
ENSLBEG00000011683	trnau1apa	100	75.157	ENSSMAG00000020851	trnau1apa	100	78.193	Scophthalmus_maximus
ENSLBEG00000011683	trnau1apa	100	81.424	ENSSDUG00000011734	trnau1apa	100	81.366	Seriola_dumerili
ENSLBEG00000011683	trnau1apa	100	68.690	ENSSLDG00000012101	trnau1apa	99	68.690	Seriola_lalandi_dorsalis
ENSLBEG00000011683	trnau1apa	91	59.930	ENSSARG00000007536	TRNAU1AP	96	60.839	Sorex_araneus
ENSLBEG00000011683	trnau1apa	58	53.333	ENSSPUG00000010415	-	94	51.667	Sphenodon_punctatus
ENSLBEG00000011683	trnau1apa	93	55.705	ENSSPUG00000010400	-	95	56.314	Sphenodon_punctatus
ENSLBEG00000011683	trnau1apa	100	82.445	ENSSPAG00000005029	trnau1apa	100	83.072	Stegastes_partitus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSSSCG00000030284	TRNAU1AP	95	60.751	Sus_scrofa
ENSLBEG00000011683	trnau1apa	68	42.991	ENSTGUG00000005908	-	99	42.661	Taeniopygia_guttata
ENSLBEG00000011683	trnau1apa	91	59.930	ENSTGUG00000000735	-	96	60.839	Taeniopygia_guttata
ENSLBEG00000011683	trnau1apa	100	79.114	ENSTRUG00000003352	trnau1apa	100	78.165	Takifugu_rubripes
ENSLBEG00000011683	trnau1apa	100	74.051	ENSTNIG00000006129	trnau1apa	100	74.051	Tetraodon_nigroviridis
ENSLBEG00000011683	trnau1apa	78	55.510	ENSTBEG00000008049	-	94	55.102	Tupaia_belangeri
ENSLBEG00000011683	trnau1apa	93	59.864	ENSTTRG00000001854	TRNAU1AP	95	60.751	Tursiops_truncatus
ENSLBEG00000011683	trnau1apa	90	59.717	ENSUAMG00000008789	TRNAU1AP	96	60.638	Ursus_americanus
ENSLBEG00000011683	trnau1apa	93	59.864	ENSUMAG00000011068	TRNAU1AP	95	60.751	Ursus_maritimus
ENSLBEG00000011683	trnau1apa	94	53.898	ENSVPAG00000006778	TRNAU1AP	96	54.762	Vicugna_pacos
ENSLBEG00000011683	trnau1apa	93	59.247	ENSVVUG00000012518	TRNAU1AP	89	59.932	Vulpes_vulpes
ENSLBEG00000011683	trnau1apa	99	76.115	ENSXMAG00000017361	trnau1apa	99	77.603	Xiphophorus_maculatus