EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011949 (Gene tree)
Gene ID: 109993626
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 12448 bases
Position: chrFKLU01000264.1:98093-110540
Accession: 109993626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015669	tRNA-synt_1g	PF09334.11	9.4e-18	1	1
ENSLBEP00000015680	tRNA-synt_1g	PF09334.11	5.2e-17	1	1
ENSLBEP00000015669	Anticodon_1	PF08264.13	2.5e-36	1	1
ENSLBEP00000015680	Anticodon_1	PF08264.13	2.6e-36	1	1
ENSLBEP00000015669	tRNA-synt_1	PF00133.22	1.2e-184	1	1
ENSLBEP00000015680	tRNA-synt_1	PF00133.22	1.6e-182	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000016611	-	3177	-	ENSLBEP00000015680	1058 (aa)	-	-
ENSLBET00000016600	-	3183	XM_020646630	ENSLBEP00000015669	1060 (aa)	XP_020502286	-

Gene Model

Click here to download ENSLBEG00000011949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011949	vars2	51	96.552	ENSLBEG00000005480	-	81	96.552
ENSLBEG00000011949	vars2	91	49.290	ENSLBEG00000010341	vars	78	49.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011949	vars2	99	74.654	ENSAPOG00000007396	vars2	99	74.839	Acanthochromis_polyacanthus
ENSLBEG00000011949	vars2	96	51.333	ENSAMEG00000012997	VARS2	92	51.594	Ailuropoda_melanoleuca
ENSLBEG00000011949	vars2	99	73.606	ENSACIG00000004344	vars2	99	73.606	Amphilophus_citrinellus
ENSLBEG00000011949	vars2	99	74.839	ENSAOCG00000000476	vars2	99	75.023	Amphiprion_ocellaris
ENSLBEG00000011949	vars2	99	74.747	ENSAPEG00000008646	vars2	97	74.931	Amphiprion_percula
ENSLBEG00000011949	vars2	99	76.547	ENSATEG00000012291	vars2	100	76.824	Anabas_testudineus
ENSLBEG00000011949	vars2	95	53.301	ENSACAG00000022093	VARS2	95	53.301	Anolis_carolinensis
ENSLBEG00000011949	vars2	97	50.189	ENSANAG00000038018	VARS2	95	50.480	Aotus_nancymaae
ENSLBEG00000011949	vars2	99	73.155	ENSACLG00000018673	vars2	99	73.155	Astatotilapia_calliptera
ENSLBEG00000011949	vars2	99	68.085	ENSAMXG00000017773	vars2	99	69.450	Astyanax_mexicanus
ENSLBEG00000011949	vars2	97	51.183	ENSBTAG00000010698	VARS2	95	51.585	Bos_taurus
ENSLBEG00000011949	vars2	97	50.284	ENSCJAG00000019826	VARS2	95	50.672	Callithrix_jacchus
ENSLBEG00000011949	vars2	96	51.469	ENSCAFG00000000454	VARS2	95	51.877	Canis_familiaris
ENSLBEG00000011949	vars2	83	55.943	ENSCAFG00020019387	VARS2	90	56.416	Canis_lupus_dingo
ENSLBEG00000011949	vars2	96	51.048	ENSCHIG00000007847	VARS2	94	51.451	Capra_hircus
ENSLBEG00000011949	vars2	96	51.570	ENSTSYG00000009904	VARS2	94	51.981	Carlito_syrichta
ENSLBEG00000011949	vars2	88	52.521	ENSCAPG00000017770	VARS2	99	52.521	Cavia_aperea
ENSLBEG00000011949	vars2	98	50.280	ENSCPOG00000021834	VARS2	95	50.862	Cavia_porcellus
ENSLBEG00000011949	vars2	97	50.237	ENSCCAG00000037907	VARS2	95	50.624	Cebus_capucinus
ENSLBEG00000011949	vars2	96	50.812	ENSCATG00000032554	VARS2	94	51.208	Cercocebus_atys
ENSLBEG00000011949	vars2	94	51.758	ENSCLAG00000002889	VARS2	94	51.758	Chinchilla_lanigera
ENSLBEG00000011949	vars2	96	51.289	ENSCSAG00000008327	VARS2	94	51.691	Chlorocebus_sabaeus
ENSLBEG00000011949	vars2	90	55.670	ENSCPBG00000021502	VARS2	94	55.670	Chrysemys_picta_bellii
ENSLBEG00000011949	vars2	96	50.621	ENSCANG00000014991	VARS2	93	51.014	Colobus_angolensis_palliatus
ENSLBEG00000011949	vars2	95	50.864	ENSCGRG00001021535	Vars2	95	50.864	Cricetulus_griseus_chok1gshd
ENSLBEG00000011949	vars2	95	50.864	ENSCGRG00000014112	Vars2	95	50.864	Cricetulus_griseus_crigri
ENSLBEG00000011949	vars2	93	70.833	ENSCSEG00000015432	vars2	99	70.833	Cynoglossus_semilaevis
ENSLBEG00000011949	vars2	67	77.119	ENSCVAG00000017765	vars2	98	77.119	Cyprinodon_variegatus
ENSLBEG00000011949	vars2	99	66.914	ENSDARG00000056717	vars2	100	66.728	Danio_rerio
ENSLBEG00000011949	vars2	83	50.395	ENSDORG00000008516	Vars2	94	50.395	Dipodomys_ordii
ENSLBEG00000011949	vars2	97	45.198	ENSETEG00000014844	VARS2	95	45.750	Echinops_telfairi
ENSLBEG00000011949	vars2	96	51.143	ENSEASG00005019997	VARS2	94	55.674	Equus_asinus_asinus
ENSLBEG00000011949	vars2	96	51.524	ENSECAG00000018202	VARS2	95	52.031	Equus_caballus
ENSLBEG00000011949	vars2	65	57.843	ENSEEUG00000012591	-	62	57.843	Erinaceus_europaeus
ENSLBEG00000011949	vars2	99	68.344	ENSELUG00000017824	vars2	99	68.344	Esox_lucius
ENSLBEG00000011949	vars2	96	51.382	ENSFCAG00000010531	VARS2	95	51.691	Felis_catus
ENSLBEG00000011949	vars2	97	50.801	ENSFDAG00000017216	VARS2	94	51.304	Fukomys_damarensis
ENSLBEG00000011949	vars2	93	67.389	ENSFHEG00000013932	vars2	98	67.389	Fundulus_heteroclitus
ENSLBEG00000011949	vars2	89	70.312	ENSGMOG00000018960	vars2	98	70.312	Gadus_morhua
ENSLBEG00000011949	vars2	94	73.786	ENSGAFG00000004737	vars2	99	73.786	Gambusia_affinis
ENSLBEG00000011949	vars2	92	76.239	ENSGACG00000001464	vars2	98	76.239	Gasterosteus_aculeatus
ENSLBEG00000011949	vars2	91	56.504	ENSGAGG00000011652	VARS2	97	56.504	Gopherus_agassizii
ENSLBEG00000011949	vars2	96	50.669	ENSGGOG00000014587	VARS2	94	51.064	Gorilla_gorilla
ENSLBEG00000011949	vars2	99	72.388	ENSHBUG00000002448	vars2	100	72.388	Haplochromis_burtoni
ENSLBEG00000011949	vars2	96	51.194	ENSHGLG00000012886	VARS2	86	53.689	Heterocephalus_glaber_female
ENSLBEG00000011949	vars2	96	51.098	ENSHGLG00100016535	VARS2	89	53.586	Heterocephalus_glaber_male
ENSLBEG00000011949	vars2	69	75.782	ENSHCOG00000017907	vars2	97	75.782	Hippocampus_comes
ENSLBEG00000011949	vars2	92	71.573	ENSIPUG00000015573	Vars2	96	69.452	Ictalurus_punctatus
ENSLBEG00000011949	vars2	98	50.187	ENSSTOG00000009924	VARS2	95	50.672	Ictidomys_tridecemlineatus
ENSLBEG00000011949	vars2	98	49.438	ENSJJAG00000011144	Vars2	95	50.192	Jaculus_jaculus
ENSLBEG00000011949	vars2	99	71.912	ENSKMAG00000001393	vars2	99	71.912	Kryptolebias_marmoratus
ENSLBEG00000011949	vars2	96	50.283	ENSLACG00000001576	-	100	50.377	Latimeria_chalumnae
ENSLBEG00000011949	vars2	97	50.804	ENSLAFG00000015183	VARS2	95	51.152	Loxodonta_africana
ENSLBEG00000011949	vars2	96	50.430	ENSMFAG00000042367	VARS2	89	52.815	Macaca_fascicularis
ENSLBEG00000011949	vars2	96	50.525	ENSMMUG00000018609	VARS2	89	52.917	Macaca_mulatta
ENSLBEG00000011949	vars2	96	50.812	ENSMNEG00000043163	VARS2	89	53.224	Macaca_nemestrina
ENSLBEG00000011949	vars2	97	50.613	ENSMLEG00000041728	VARS2	86	53.224	Mandrillus_leucophaeus
ENSLBEG00000011949	vars2	99	73.229	ENSMAMG00000020339	vars2	100	73.597	Mastacembelus_armatus
ENSLBEG00000011949	vars2	99	73.063	ENSMZEG00005017669	vars2	99	73.063	Maylandia_zebra
ENSLBEG00000011949	vars2	97	50.237	ENSMAUG00000018946	Vars2	95	50.768	Mesocricetus_auratus
ENSLBEG00000011949	vars2	80	55.266	ENSMICG00000005365	VARS2	96	55.940	Microcebus_murinus
ENSLBEG00000011949	vars2	88	57.379	ENSMOCG00000014607	Vars2	95	57.379	Microtus_ochrogaster
ENSLBEG00000011949	vars2	99	72.279	ENSMMOG00000012122	vars2	99	72.465	Mola_mola
ENSLBEG00000011949	vars2	95	50.482	ENSMODG00000015848	VARS2	97	49.583	Monodelphis_domestica
ENSLBEG00000011949	vars2	99	75.116	ENSMALG00000009217	vars2	98	76.892	Monopterus_albus
ENSLBEG00000011949	vars2	97	50.707	MGP_CAROLIEiJ_G0021529	Vars2	93	56.318	Mus_caroli
ENSLBEG00000011949	vars2	95	50.813	ENSMUSG00000038838	Vars2	93	55.957	Mus_musculus
ENSLBEG00000011949	vars2	97	50.282	MGP_PahariEiJ_G0020523	Vars2	93	55.776	Mus_pahari
ENSLBEG00000011949	vars2	97	50.567	MGP_SPRETEiJ_G0022436	Vars2	93	56.137	Mus_spretus
ENSLBEG00000011949	vars2	97	51.318	ENSMPUG00000011643	VARS2	95	51.678	Mustela_putorius_furo
ENSLBEG00000011949	vars2	92	52.315	ENSMLUG00000002356	VARS2	89	52.642	Myotis_lucifugus
ENSLBEG00000011949	vars2	96	46.869	ENSNGAG00000020607	Vars2	95	47.267	Nannospalax_galili
ENSLBEG00000011949	vars2	70	66.205	ENSNBRG00000001624	vars2	61	66.022	Neolamprologus_brichardi
ENSLBEG00000011949	vars2	95	49.904	ENSNLEG00000005625	VARS2	88	52.152	Nomascus_leucogenys
ENSLBEG00000011949	vars2	80	56.333	ENSMEUG00000014475	VARS2	89	56.333	Notamacropus_eugenii
ENSLBEG00000011949	vars2	86	47.995	ENSOPRG00000000682	VARS2	85	49.189	Ochotona_princeps
ENSLBEG00000011949	vars2	97	50.519	ENSODEG00000017965	VARS2	95	50.958	Octodon_degus
ENSLBEG00000011949	vars2	92	56.816	ENSONIG00000004734	vars2	98	56.859	Oreochromis_niloticus
ENSLBEG00000011949	vars2	73	45.281	ENSOANG00000000398	-	92	45.281	Ornithorhynchus_anatinus
ENSLBEG00000011949	vars2	95	47.943	ENSOCUG00000021496	VARS2	61	48.517	Oryctolagus_cuniculus
ENSLBEG00000011949	vars2	99	70.540	ENSORLG00000010632	vars2	99	70.540	Oryzias_latipes
ENSLBEG00000011949	vars2	99	70.814	ENSORLG00020018584	vars2	99	70.814	Oryzias_latipes_hni
ENSLBEG00000011949	vars2	99	70.712	ENSORLG00015010408	vars2	100	70.620	Oryzias_latipes_hsok
ENSLBEG00000011949	vars2	94	73.114	ENSOMEG00000008360	vars2	99	71.284	Oryzias_melastigma
ENSLBEG00000011949	vars2	96	50.712	ENSOGAG00000006087	VARS2	92	51.205	Otolemur_garnettii
ENSLBEG00000011949	vars2	96	50.095	ENSOARG00000010844	VARS2	93	50.483	Ovis_aries
ENSLBEG00000011949	vars2	96	50.860	ENSPPAG00000041141	VARS2	94	51.161	Pan_paniscus
ENSLBEG00000011949	vars2	96	51.143	ENSPPRG00000006751	VARS2	92	51.448	Panthera_pardus
ENSLBEG00000011949	vars2	96	51.048	ENSPTIG00000017799	VARS2	93	53.429	Panthera_tigris_altaica
ENSLBEG00000011949	vars2	96	50.860	ENSPTRG00000034497	VARS2	94	51.161	Pan_troglodytes
ENSLBEG00000011949	vars2	96	51.003	ENSPANG00000018481	VARS2	95	52.291	Papio_anubis
ENSLBEG00000011949	vars2	99	65.648	ENSPKIG00000011372	vars2	99	65.133	Paramormyrops_kingsleyae
ENSLBEG00000011949	vars2	58	62.736	ENSPSIG00000006206	VARS2	92	62.404	Pelodiscus_sinensis
ENSLBEG00000011949	vars2	99	69.804	ENSPMGG00000000465	vars2	99	69.804	Periophthalmus_magnuspinnatus
ENSLBEG00000011949	vars2	95	51.152	ENSPEMG00000014691	Vars2	95	51.152	Peromyscus_maniculatus_bairdii
ENSLBEG00000011949	vars2	95	51.257	ENSPCIG00000015040	VARS2	96	51.141	Phascolarctos_cinereus
ENSLBEG00000011949	vars2	98	70.429	ENSPFOG00000017616	vars2	96	71.662	Poecilia_formosa
ENSLBEG00000011949	vars2	99	70.203	ENSPLAG00000019778	vars2	99	70.203	Poecilia_latipinna
ENSLBEG00000011949	vars2	99	70.203	ENSPMEG00000011123	vars2	99	70.203	Poecilia_mexicana
ENSLBEG00000011949	vars2	97	64.627	ENSPREG00000014998	vars2	99	64.442	Poecilia_reticulata
ENSLBEG00000011949	vars2	96	50.669	ENSPPYG00000016424	VARS2	94	51.210	Pongo_abelii
ENSLBEG00000011949	vars2	63	55.408	ENSPCAG00000006946	VARS2	78	55.408	Procavia_capensis
ENSLBEG00000011949	vars2	96	50.522	ENSPCOG00000014839	VARS2	92	51.013	Propithecus_coquereli
ENSLBEG00000011949	vars2	97	50.567	ENSPVAG00000004197	VARS2	95	50.911	Pteropus_vampyrus
ENSLBEG00000011949	vars2	87	77.778	ENSPNYG00000010314	vars2	99	77.778	Pundamilia_nyererei
ENSLBEG00000011949	vars2	99	68.566	ENSPNAG00000026793	vars2	99	68.566	Pygocentrus_nattereri
ENSLBEG00000011949	vars2	97	50.473	ENSRNOG00000000833	Vars2	95	50.864	Rattus_norvegicus
ENSLBEG00000011949	vars2	96	50.334	ENSRBIG00000032725	VARS2	94	50.725	Rhinopithecus_bieti
ENSLBEG00000011949	vars2	96	50.430	ENSRROG00000043847	VARS2	94	50.821	Rhinopithecus_roxellana
ENSLBEG00000011949	vars2	97	49.351	ENSSBOG00000033240	VARS2	93	49.624	Saimiri_boliviensis_boliviensis
ENSLBEG00000011949	vars2	97	50.424	ENSSHAG00000009307	VARS2	96	51.005	Sarcophilus_harrisii
ENSLBEG00000011949	vars2	99	66.328	ENSSFOG00015016187	vars2	99	66.328	Scleropages_formosus
ENSLBEG00000011949	vars2	99	76.085	ENSSMAG00000020842	vars2	99	76.362	Scophthalmus_maximus
ENSLBEG00000011949	vars2	99	77.583	ENSSDUG00000011598	vars2	99	77.768	Seriola_dumerili
ENSLBEG00000011949	vars2	99	78.204	ENSSLDG00000015492	vars2	99	78.204	Seriola_lalandi_dorsalis
ENSLBEG00000011949	vars2	50	60.345	ENSSARG00000003786	-	59	60.345	Sorex_araneus
ENSLBEG00000011949	vars2	78	59.691	ENSSPUG00000014700	VARS2	86	59.691	Sphenodon_punctatus
ENSLBEG00000011949	vars2	99	74.462	ENSSPAG00000004654	vars2	100	74.462	Stegastes_partitus
ENSLBEG00000011949	vars2	96	51.573	ENSSSCG00000001384	VARS2	93	54.681	Sus_scrofa
ENSLBEG00000011949	vars2	98	71.094	ENSTRUG00000005264	vars2	99	71.863	Takifugu_rubripes
ENSLBEG00000011949	vars2	98	67.385	ENSTNIG00000005916	vars2	96	69.615	Tetraodon_nigroviridis
ENSLBEG00000011949	vars2	75	57.426	ENSTTRG00000012243	VARS2	77	57.426	Tursiops_truncatus
ENSLBEG00000011949	vars2	97	51.372	ENSUAMG00000026124	VARS2	99	53.185	Ursus_americanus
ENSLBEG00000011949	vars2	97	51.420	ENSUMAG00000019894	VARS2	95	51.727	Ursus_maritimus
ENSLBEG00000011949	vars2	97	50.942	ENSVVUG00000010754	VARS2	90	51.338	Vulpes_vulpes
ENSLBEG00000011949	vars2	87	51.420	ENSXETG00000003036	vars2	97	51.420	Xenopus_tropicalis
ENSLBEG00000011949	vars2	97	71.103	ENSXCOG00000003455	vars2	99	71.103	Xiphophorus_couchianus
ENSLBEG00000011949	vars2	99	70.941	ENSXMAG00000013523	vars2	99	70.941	Xiphophorus_maculatus