EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000011986 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein ZFMSA12A-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5003 bases
Position: chrFKLU01003906.1:13044-18046
Accession: 109976216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015393	zf-C2H2	PF00096.26	2.7e-44	1	8
ENSLBEP00000015393	zf-C2H2	PF00096.26	2.7e-44	2	8
ENSLBEP00000015393	zf-C2H2	PF00096.26	2.7e-44	3	8
ENSLBEP00000015393	zf-C2H2	PF00096.26	2.7e-44	4	8
ENSLBEP00000015393	zf-C2H2	PF00096.26	2.7e-44	5	8
ENSLBEP00000015393	zf-C2H2	PF00096.26	2.7e-44	6	8
ENSLBEP00000015393	zf-C2H2	PF00096.26	2.7e-44	7	8
ENSLBEP00000015393	zf-C2H2	PF00096.26	2.7e-44	8	8
ENSLBEP00000015393	zf-met	PF12874.7	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000016316	-	2418	XM_020626380	ENSLBEP00000015393	406 (aa)	XP_020482036	-

Gene Model

Click here to download ENSLBEG00000011986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000011986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000011986	-	88	41.727	ENSLBEG00000006924	-	99	41.727
ENSLBEG00000011986	-	89	42.857	ENSLBEG00000026552	-	50	42.857
ENSLBEG00000011986	-	89	34.375	ENSLBEG00000018970	-	79	34.375
ENSLBEG00000011986	-	88	38.308	ENSLBEG00000000435	-	73	38.308
ENSLBEG00000011986	-	91	33.333	ENSLBEG00000013821	hic2	58	31.792
ENSLBEG00000011986	-	87	44.037	ENSLBEG00000026457	-	96	34.914
ENSLBEG00000011986	-	88	44.348	ENSLBEG00000020128	-	98	41.722
ENSLBEG00000011986	-	94	36.916	ENSLBEG00000017726	-	80	36.916
ENSLBEG00000011986	-	89	33.544	ENSLBEG00000018509	-	90	33.544
ENSLBEG00000011986	-	64	36.957	ENSLBEG00000002594	-	69	36.957
ENSLBEG00000011986	-	93	32.419	ENSLBEG00000005715	-	79	32.970
ENSLBEG00000011986	-	81	40.299	ENSLBEG00000000972	snai2	58	35.659
ENSLBEG00000011986	-	81	36.232	ENSLBEG00000011006	-	51	36.232
ENSLBEG00000011986	-	89	40.909	ENSLBEG00000015264	-	81	40.909
ENSLBEG00000011986	-	81	47.826	ENSLBEG00000008733	-	57	47.826
ENSLBEG00000011986	-	89	45.000	ENSLBEG00000004867	-	67	45.000
ENSLBEG00000011986	-	84	47.619	ENSLBEG00000001715	-	90	47.619
ENSLBEG00000011986	-	89	45.545	ENSLBEG00000009567	-	71	30.117
ENSLBEG00000011986	-	90	36.364	ENSLBEG00000024509	-	99	34.211
ENSLBEG00000011986	-	82	36.418	ENSLBEG00000020747	-	96	36.418
ENSLBEG00000011986	-	88	41.954	ENSLBEG00000014211	-	87	41.954
ENSLBEG00000011986	-	91	35.417	ENSLBEG00000013235	-	80	34.495
ENSLBEG00000011986	-	94	34.831	ENSLBEG00000028243	-	84	34.831
ENSLBEG00000011986	-	89	41.111	ENSLBEG00000007106	-	65	41.111
ENSLBEG00000011986	-	88	34.375	ENSLBEG00000011210	-	57	34.375
ENSLBEG00000011986	-	92	45.536	ENSLBEG00000025689	-	72	45.536
ENSLBEG00000011986	-	92	31.008	ENSLBEG00000014676	-	64	31.008
ENSLBEG00000011986	-	88	34.463	ENSLBEG00000019067	zbtb47b	53	34.463
ENSLBEG00000011986	-	75	41.071	ENSLBEG00000007937	-	65	41.071
ENSLBEG00000011986	-	51	48.810	ENSLBEG00000011588	-	62	48.810
ENSLBEG00000011986	-	96	42.564	ENSLBEG00000008689	-	89	40.816
ENSLBEG00000011986	-	90	36.612	ENSLBEG00000006161	-	80	36.612
ENSLBEG00000011986	-	89	43.558	ENSLBEG00000004833	-	69	43.558
ENSLBEG00000011986	-	88	42.222	ENSLBEG00000012201	-	59	42.222
ENSLBEG00000011986	-	89	41.414	ENSLBEG00000028628	znf1174	52	41.414
ENSLBEG00000011986	-	89	38.679	ENSLBEG00000021260	-	89	38.679
ENSLBEG00000011986	-	91	44.025	ENSLBEG00000024737	-	95	41.414
ENSLBEG00000011986	-	87	32.782	ENSLBEG00000009580	-	83	32.782
ENSLBEG00000011986	-	90	34.973	ENSLBEG00000011313	-	75	34.973
ENSLBEG00000011986	-	89	39.634	ENSLBEG00000000369	-	84	39.634
ENSLBEG00000011986	-	89	40.816	ENSLBEG00000002278	-	69	40.816
ENSLBEG00000011986	-	79	46.237	ENSLBEG00000008909	-	84	46.237
ENSLBEG00000011986	-	99	36.517	ENSLBEG00000014195	-	53	36.517
ENSLBEG00000011986	-	88	36.813	ENSLBEG00000011250	-	73	36.364
ENSLBEG00000011986	-	89	40.506	ENSLBEG00000001132	-	95	37.500
ENSLBEG00000011986	-	88	32.500	ENSLBEG00000023388	-	58	31.579
ENSLBEG00000011986	-	94	41.667	ENSLBEG00000005307	znf236	82	41.667
ENSLBEG00000011986	-	89	41.243	ENSLBEG00000014282	-	77	41.243
ENSLBEG00000011986	-	88	41.250	ENSLBEG00000027776	gfi1ab	55	41.250
ENSLBEG00000011986	-	90	33.945	ENSLBEG00000011145	si:cabz01071911.3	85	33.945
ENSLBEG00000011986	-	88	38.378	ENSLBEG00000004892	-	82	38.378
ENSLBEG00000011986	-	88	42.373	ENSLBEG00000000393	-	67	42.373
ENSLBEG00000011986	-	82	35.455	ENSLBEG00000006963	-	58	35.455
ENSLBEG00000011986	-	82	36.029	ENSLBEG00000011349	-	67	44.286
ENSLBEG00000011986	-	90	43.357	ENSLBEG00000011040	-	52	43.357
ENSLBEG00000011986	-	88	37.838	ENSLBEG00000028271	-	82	32.632
ENSLBEG00000011986	-	96	38.095	ENSLBEG00000010278	-	95	38.854
ENSLBEG00000011986	-	88	32.595	ENSLBEG00000017407	-	56	32.595
ENSLBEG00000011986	-	93	43.243	ENSLBEG00000012438	ZNF319	93	43.243
ENSLBEG00000011986	-	89	34.314	ENSLBEG00000024536	-	87	33.987
ENSLBEG00000011986	-	95	32.667	ENSLBEG00000010933	-	60	32.353
ENSLBEG00000011986	-	90	38.725	ENSLBEG00000015694	-	88	38.725
ENSLBEG00000011986	-	95	42.735	ENSLBEG00000008115	-	94	42.735
ENSLBEG00000011986	-	89	45.333	ENSLBEG00000000343	-	69	46.835
ENSLBEG00000011986	-	92	31.008	ENSLBEG00000025305	-	86	31.008
ENSLBEG00000011986	-	96	39.378	ENSLBEG00000001756	-	96	39.378
ENSLBEG00000011986	-	88	43.571	ENSLBEG00000011289	-	56	43.571
ENSLBEG00000011986	-	94	33.898	ENSLBEG00000011751	znf526	86	37.143
ENSLBEG00000011986	-	89	45.270	ENSLBEG00000014263	-	59	45.270
ENSLBEG00000011986	-	89	45.455	ENSLBEG00000002357	-	93	43.011
ENSLBEG00000011986	-	91	42.523	ENSLBEG00000017450	-	96	42.523
ENSLBEG00000011986	-	93	32.527	ENSLBEG00000008320	-	65	34.211
ENSLBEG00000011986	-	91	41.204	ENSLBEG00000008606	-	94	41.081
ENSLBEG00000011986	-	88	42.197	ENSLBEG00000020297	gfi1b	55	42.197
ENSLBEG00000011986	-	87	45.522	ENSLBEG00000001920	-	98	45.522
ENSLBEG00000011986	-	94	32.329	ENSLBEG00000011091	si:cabz01071911.3	97	32.329
ENSLBEG00000011986	-	89	36.842	ENSLBEG00000024454	-	51	36.842
ENSLBEG00000011986	-	90	40.000	ENSLBEG00000010132	-	61	40.000
ENSLBEG00000011986	-	89	48.447	ENSLBEG00000013570	-	94	48.447
ENSLBEG00000011986	-	89	38.272	ENSLBEG00000011028	-	73	38.272
ENSLBEG00000011986	-	89	44.737	ENSLBEG00000007251	-	75	44.737
ENSLBEG00000011986	-	89	39.896	ENSLBEG00000011465	-	87	42.222
ENSLBEG00000011986	-	67	37.647	ENSLBEG00000006082	zgc:171929	50	37.647
ENSLBEG00000011986	-	89	36.585	ENSLBEG00000005729	znf652	93	33.540
ENSLBEG00000011986	-	91	35.772	ENSLBEG00000027993	-	72	35.772
ENSLBEG00000011986	-	91	42.442	ENSLBEG00000010165	-	89	42.188
ENSLBEG00000011986	-	91	33.974	ENSLBEG00000007837	-	92	33.974
ENSLBEG00000011986	-	90	33.245	ENSLBEG00000022736	prdm5	77	34.262
ENSLBEG00000011986	-	88	44.444	ENSLBEG00000000373	-	72	44.444
ENSLBEG00000011986	-	89	38.071	ENSLBEG00000017424	-	97	38.071
ENSLBEG00000011986	-	89	44.248	ENSLBEG00000025696	-	87	36.493
ENSLBEG00000011986	-	90	30.579	ENSLBEG00000013197	PRDM15	51	30.579
ENSLBEG00000011986	-	89	47.368	ENSLBEG00000016666	znf341	52	30.584
ENSLBEG00000011986	-	88	43.333	ENSLBEG00000004805	-	75	40.933
ENSLBEG00000011986	-	78	46.552	ENSLBEG00000024458	-	77	46.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000011986	-	95	78.442	ENSATEG00000009436	-	90	78.442	Anabas_testudineus
ENSLBEG00000011986	-	90	38.060	ENSCVAG00000019519	-	72	38.060	Cyprinodon_variegatus
ENSLBEG00000011986	-	92	43.750	ENSELUG00000009654	-	68	39.080	Esox_lucius
ENSLBEG00000011986	-	91	70.066	ENSHCOG00000002898	-	54	70.066	Hippocampus_comes
ENSLBEG00000011986	-	91	78.378	ENSONIG00000008984	-	99	78.378	Oreochromis_niloticus
ENSLBEG00000011986	-	91	35.897	ENSORLG00000016243	-	67	35.897	Oryzias_latipes
ENSLBEG00000011986	-	91	35.897	ENSORLG00015002548	-	67	35.897	Oryzias_latipes_hsok
ENSLBEG00000011986	-	90	32.843	ENSPFOG00000018462	-	95	32.843	Poecilia_formosa
ENSLBEG00000011986	-	90	46.875	ENSSFOG00015008577	-	98	44.949	Scleropages_formosus
ENSLBEG00000011986	-	96	75.897	ENSSMAG00000000056	-	56	75.897	Scophthalmus_maximus
ENSLBEG00000011986	-	98	68.090	ENSTRUG00000005880	-	55	68.090	Takifugu_rubripes
ENSLBEG00000011986	-	96	43.636	ENSXETG00000030249	-	62	43.636	Xenopus_tropicalis