EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000012002 (Gene tree)
Gene ID: 109998158
Gene Symbol: -
Alias: cb445|cb789|sb:cb445|wu:fa06c04|wu:fb16f02
Full Name: ADP-ribosylation factor 4-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3941 bases
Position: chrFKLU01000465.1:38394-42334
Accession: 109998158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015434	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000016357	-	546	XM_020652917	ENSLBEP00000015434	181 (aa)	XP_020508573	UPI0009B466D2

Gene Model

Click here to download ENSLBEG00000012002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000012002	-	92	49.701	ENSLBEG00000016494	arl2	90	49.701
ENSLBEG00000012002	-	93	37.912	ENSLBEG00000004752	arfrp1	89	37.912
ENSLBEG00000012002	-	96	47.399	ENSLBEG00000006177	arl5c	83	47.399
ENSLBEG00000012002	-	95	32.370	ENSLBEG00000022310	arl8ba	79	32.370
ENSLBEG00000012002	-	99	45.000	ENSLBEG00000017173	arl8	100	45.000
ENSLBEG00000012002	-	99	78.889	ENSLBEG00000012046	-	99	78.889
ENSLBEG00000012002	-	90	41.212	ENSLBEG00000027842	-	81	41.212
ENSLBEG00000012002	-	91	43.636	ENSLBEG00000025929	arl3	94	43.636
ENSLBEG00000012002	-	96	55.491	ENSLBEG00000000991	arl1	99	55.491
ENSLBEG00000012002	-	85	47.500	ENSLBEG00000011152	arl4d	80	47.500
ENSLBEG00000012002	-	89	30.636	ENSLBEG00000016945	-	87	30.636
ENSLBEG00000012002	-	97	46.703	ENSLBEG00000012677	arl4cb	95	46.703
ENSLBEG00000012002	-	98	79.661	ENSLBEG00000023263	-	98	79.661
ENSLBEG00000012002	-	88	43.293	ENSLBEG00000021116	arl14	77	43.293
ENSLBEG00000012002	-	96	64.407	ENSLBEG00000024782	ARF6	97	64.407
ENSLBEG00000012002	-	83	45.695	ENSLBEG00000015748	arl11	85	45.695
ENSLBEG00000012002	-	92	46.988	ENSLBEG00000017331	-	95	46.988
ENSLBEG00000012002	-	92	42.771	ENSLBEG00000027806	arl3l2	89	42.771
ENSLBEG00000012002	-	97	78.531	ENSLBEG00000001998	arf1	100	78.531
ENSLBEG00000012002	-	86	48.765	ENSLBEG00000013638	arl4aa	88	48.765
ENSLBEG00000012002	-	99	86.667	ENSLBEG00000026532	arf5	100	86.667
ENSLBEG00000012002	-	62	30.081	ENSLBEG00000021040	rab1ba	58	30.081
ENSLBEG00000012002	-	99	80.556	ENSLBEG00000009272	arf2b	99	80.556
ENSLBEG00000012002	-	97	48.634	ENSLBEG00000010335	-	94	48.634
ENSLBEG00000012002	-	99	78.889	ENSLBEG00000018992	arf3b	99	78.889
ENSLBEG00000012002	-	89	30.058	ENSLBEG00000001114	sar1ab	87	30.058
ENSLBEG00000012002	-	98	72.316	ENSLBEG00000027205	-	99	72.316
ENSLBEG00000012002	-	99	46.111	ENSLBEG00000016471	arl5a	100	46.111
ENSLBEG00000012002	-	95	40.556	ENSLBEG00000010881	ARL6	94	40.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012002	-	99	85.000	ENSG00000004059	ARF5	100	85.000	Homo_sapiens
ENSLBEG00000012002	-	98	84.831	ENSAPOG00000000667	-	99	84.831	Acanthochromis_polyacanthus
ENSLBEG00000012002	-	99	85.000	ENSAMEG00000004635	ARF5	100	85.000	Ailuropoda_melanoleuca
ENSLBEG00000012002	-	99	86.667	ENSACIG00000005843	arf5	100	86.667	Amphilophus_citrinellus
ENSLBEG00000012002	-	99	70.556	ENSACIG00000014610	zgc:110286	100	70.556	Amphilophus_citrinellus
ENSLBEG00000012002	-	98	86.517	ENSACIG00000000467	-	99	86.517	Amphilophus_citrinellus
ENSLBEG00000012002	-	98	86.517	ENSAOCG00000023329	arf5	99	86.517	Amphiprion_ocellaris
ENSLBEG00000012002	-	98	85.393	ENSAOCG00000008113	-	99	85.393	Amphiprion_ocellaris
ENSLBEG00000012002	-	98	86.517	ENSAPEG00000024614	arf5	99	86.517	Amphiprion_percula
ENSLBEG00000012002	-	98	85.393	ENSAPEG00000003087	-	99	85.393	Amphiprion_percula
ENSLBEG00000012002	-	99	86.111	ENSATEG00000003053	ARF5	100	86.111	Anabas_testudineus
ENSLBEG00000012002	-	98	87.079	ENSATEG00000001302	-	99	87.079	Anabas_testudineus
ENSLBEG00000012002	-	99	85.000	ENSANAG00000026446	ARF5	100	85.000	Aotus_nancymaae
ENSLBEG00000012002	-	98	86.517	ENSACLG00000025604	-	99	86.517	Astatotilapia_calliptera
ENSLBEG00000012002	-	99	87.222	ENSACLG00000005705	arf5	100	87.222	Astatotilapia_calliptera
ENSLBEG00000012002	-	99	86.667	ENSAMXG00000004249	-	100	86.667	Astyanax_mexicanus
ENSLBEG00000012002	-	99	86.111	ENSAMXG00000038224	-	100	86.111	Astyanax_mexicanus
ENSLBEG00000012002	-	99	85.556	ENSAMXG00000031467	arf4a	100	85.556	Astyanax_mexicanus
ENSLBEG00000012002	-	99	85.556	ENSAMXG00000031774	ARF5	100	85.556	Astyanax_mexicanus
ENSLBEG00000012002	-	99	85.000	ENSBTAG00000009366	ARF5	100	85.000	Bos_taurus
ENSLBEG00000012002	-	98	84.270	WBGene00000183	arf-3	99	84.270	Caenorhabditis_elegans
ENSLBEG00000012002	-	99	85.000	ENSCJAG00000017604	ARF5	100	85.000	Callithrix_jacchus
ENSLBEG00000012002	-	99	71.495	ENSCAFG00020021629	ARF5	100	71.495	Canis_lupus_dingo
ENSLBEG00000012002	-	99	85.000	ENSCHIG00000018906	ARF5	100	85.000	Capra_hircus
ENSLBEG00000012002	-	99	82.873	ENSCPOG00000006239	ARF5	100	82.873	Cavia_porcellus
ENSLBEG00000012002	-	99	85.000	ENSCCAG00000027943	-	100	85.000	Cebus_capucinus
ENSLBEG00000012002	-	99	85.000	ENSCATG00000010217	ARF5	100	85.000	Cercocebus_atys
ENSLBEG00000012002	-	99	85.000	ENSCLAG00000007930	ARF5	100	85.000	Chinchilla_lanigera
ENSLBEG00000012002	-	99	85.000	ENSCSAG00000010208	ARF5	100	85.000	Chlorocebus_sabaeus
ENSLBEG00000012002	-	98	76.836	ENSCING00000004846	-	98	76.836	Ciona_intestinalis
ENSLBEG00000012002	-	98	75.978	ENSCSAVG00000001959	-	98	75.978	Ciona_savignyi
ENSLBEG00000012002	-	89	83.851	ENSCANG00000037234	ARF5	98	83.851	Colobus_angolensis_palliatus
ENSLBEG00000012002	-	99	85.000	ENSCGRG00001024919	Arf5	100	85.000	Cricetulus_griseus_chok1gshd
ENSLBEG00000012002	-	99	86.111	ENSCSEG00000006004	arf5	100	86.111	Cynoglossus_semilaevis
ENSLBEG00000012002	-	98	84.831	ENSCVAG00000011381	-	99	84.831	Cyprinodon_variegatus
ENSLBEG00000012002	-	99	87.222	ENSCVAG00000007314	-	100	87.222	Cyprinodon_variegatus
ENSLBEG00000012002	-	99	87.222	ENSCVAG00000009124	ARF5	100	87.222	Cyprinodon_variegatus
ENSLBEG00000012002	-	99	86.667	ENSDARG00000070472	arf5	100	86.667	Danio_rerio
ENSLBEG00000012002	-	99	69.061	ENSDARG00000074210	ARF5	89	69.061	Danio_rerio
ENSLBEG00000012002	-	99	83.889	ENSDARG00000045989	arf4a	100	83.889	Danio_rerio
ENSLBEG00000012002	-	99	86.667	ENSDARG00000113899	zgc:77650	100	86.667	Danio_rerio
ENSLBEG00000012002	-	99	85.000	ENSDORG00000000325	Arf5	100	85.000	Dipodomys_ordii
ENSLBEG00000012002	-	99	81.111	FBgn0013749	Arf102F	100	81.111	Drosophila_melanogaster
ENSLBEG00000012002	-	97	81.143	ENSETEG00000009275	ARF5	100	81.143	Echinops_telfairi
ENSLBEG00000012002	-	99	82.778	ENSEBUG00000014420	-	100	82.778	Eptatretus_burgeri
ENSLBEG00000012002	-	98	71.186	ENSEBUG00000004484	-	98	71.186	Eptatretus_burgeri
ENSLBEG00000012002	-	98	75.281	ENSELUG00000014428	arf4	99	75.281	Esox_lucius
ENSLBEG00000012002	-	99	85.000	ENSFCAG00000005482	ARF5	100	85.000	Felis_catus
ENSLBEG00000012002	-	99	86.667	ENSFHEG00000023119	arf5	100	86.667	Fundulus_heteroclitus
ENSLBEG00000012002	-	99	85.000	ENSGMOG00000008747	arf5	100	85.000	Gadus_morhua
ENSLBEG00000012002	-	99	83.333	ENSGMOG00000019109	-	99	83.333	Gadus_morhua
ENSLBEG00000012002	-	98	84.831	ENSGAFG00000005163	-	99	84.831	Gambusia_affinis
ENSLBEG00000012002	-	99	87.222	ENSGAFG00000018703	arf5	100	87.222	Gambusia_affinis
ENSLBEG00000012002	-	99	86.111	ENSGACG00000000686	arf5	100	86.111	Gasterosteus_aculeatus
ENSLBEG00000012002	-	98	83.708	ENSGACG00000012500	-	99	83.708	Gasterosteus_aculeatus
ENSLBEG00000012002	-	99	84.444	ENSGAGG00000000231	ARF5	100	84.444	Gopherus_agassizii
ENSLBEG00000012002	-	99	85.000	ENSGGOG00000016749	ARF5	100	85.000	Gorilla_gorilla
ENSLBEG00000012002	-	99	87.222	ENSHBUG00000008546	arf5	100	87.222	Haplochromis_burtoni
ENSLBEG00000012002	-	98	86.517	ENSHBUG00000011041	-	99	86.517	Haplochromis_burtoni
ENSLBEG00000012002	-	99	85.000	ENSHGLG00000007494	ARF5	100	85.000	Heterocephalus_glaber_female
ENSLBEG00000012002	-	99	83.889	ENSHGLG00100006040	ARF5	60	83.889	Heterocephalus_glaber_male
ENSLBEG00000012002	-	98	84.831	ENSHCOG00000015577	-	99	84.831	Hippocampus_comes
ENSLBEG00000012002	-	99	71.111	ENSIPUG00000006913	-	70	71.111	Ictalurus_punctatus
ENSLBEG00000012002	-	99	86.667	ENSIPUG00000004159	Arf5	100	86.667	Ictalurus_punctatus
ENSLBEG00000012002	-	99	85.000	ENSIPUG00000007016	arf4	100	85.000	Ictalurus_punctatus
ENSLBEG00000012002	-	99	85.556	ENSIPUG00000004215	arf5	100	85.556	Ictalurus_punctatus
ENSLBEG00000012002	-	99	85.000	ENSSTOG00000002104	ARF5	100	85.000	Ictidomys_tridecemlineatus
ENSLBEG00000012002	-	99	85.000	ENSJJAG00000005105	Arf5	100	85.000	Jaculus_jaculus
ENSLBEG00000012002	-	98	85.393	ENSKMAG00000012816	-	99	85.393	Kryptolebias_marmoratus
ENSLBEG00000012002	-	99	85.000	ENSLAFG00000011469	ARF5	100	85.000	Loxodonta_africana
ENSLBEG00000012002	-	99	85.000	ENSMFAG00000019772	ARF5	100	85.000	Macaca_fascicularis
ENSLBEG00000012002	-	99	85.000	ENSMMUG00000046381	ARF5	100	85.000	Macaca_mulatta
ENSLBEG00000012002	-	99	85.000	ENSMNEG00000040893	ARF5	100	85.000	Macaca_nemestrina
ENSLBEG00000012002	-	99	85.556	ENSMAMG00000021160	arf5	100	85.556	Mastacembelus_armatus
ENSLBEG00000012002	-	98	87.079	ENSMAMG00000008223	-	99	87.079	Mastacembelus_armatus
ENSLBEG00000012002	-	86	87.821	ENSMZEG00005019741	-	93	87.821	Maylandia_zebra
ENSLBEG00000012002	-	99	87.222	ENSMZEG00005015033	arf5	67	87.222	Maylandia_zebra
ENSLBEG00000012002	-	99	85.000	ENSMAUG00000014825	Arf5	100	85.000	Mesocricetus_auratus
ENSLBEG00000012002	-	99	85.000	ENSMICG00000000091	ARF5	100	85.000	Microcebus_murinus
ENSLBEG00000012002	-	99	85.000	ENSMOCG00000022861	Arf5	100	85.000	Microtus_ochrogaster
ENSLBEG00000012002	-	99	84.444	ENSMODG00000015229	ARF5	100	84.444	Monodelphis_domestica
ENSLBEG00000012002	-	99	86.111	ENSMALG00000010117	-	100	86.111	Monopterus_albus
ENSLBEG00000012002	-	98	70.621	ENSMALG00000022638	zgc:110286	99	70.621	Monopterus_albus
ENSLBEG00000012002	-	98	87.640	ENSMALG00000006020	-	99	87.640	Monopterus_albus
ENSLBEG00000012002	-	99	85.000	MGP_CAROLIEiJ_G0028156	Arf5	100	85.000	Mus_caroli
ENSLBEG00000012002	-	99	85.000	ENSMUSG00000020440	Arf5	100	85.000	Mus_musculus
ENSLBEG00000012002	-	99	85.000	MGP_PahariEiJ_G0021914	Arf5	100	85.000	Mus_pahari
ENSLBEG00000012002	-	99	85.000	MGP_SPRETEiJ_G0029156	Arf5	100	85.000	Mus_spretus
ENSLBEG00000012002	-	99	85.000	ENSMPUG00000006675	ARF5	100	85.000	Mustela_putorius_furo
ENSLBEG00000012002	-	99	85.000	ENSMLUG00000017122	ARF5	100	85.000	Myotis_lucifugus
ENSLBEG00000012002	-	99	85.000	ENSNGAG00000011743	Arf5	100	85.000	Nannospalax_galili
ENSLBEG00000012002	-	99	87.222	ENSNBRG00000018854	arf5	100	87.222	Neolamprologus_brichardi
ENSLBEG00000012002	-	99	85.000	ENSODEG00000011800	ARF5	100	85.000	Octodon_degus
ENSLBEG00000012002	-	99	87.222	ENSONIG00000007594	arf5	100	87.222	Oreochromis_niloticus
ENSLBEG00000012002	-	98	86.517	ENSONIG00000014890	-	99	86.517	Oreochromis_niloticus
ENSLBEG00000012002	-	99	85.000	ENSOCUG00000024365	ARF5	100	85.000	Oryctolagus_cuniculus
ENSLBEG00000012002	-	98	87.079	ENSORLG00020001755	-	99	87.079	Oryzias_latipes_hni
ENSLBEG00000012002	-	99	86.667	ENSOMEG00000020821	ARF5	100	86.667	Oryzias_melastigma
ENSLBEG00000012002	-	98	87.079	ENSOMEG00000000211	-	64	87.079	Oryzias_melastigma
ENSLBEG00000012002	-	99	85.000	ENSOGAG00000013336	ARF5	100	85.000	Otolemur_garnettii
ENSLBEG00000012002	-	99	85.000	ENSPPAG00000037755	ARF5	100	85.000	Pan_paniscus
ENSLBEG00000012002	-	99	85.000	ENSPPRG00000004674	ARF5	100	85.000	Panthera_pardus
ENSLBEG00000012002	-	99	85.000	ENSPTRG00000019651	ARF5	100	85.000	Pan_troglodytes
ENSLBEG00000012002	-	99	85.000	ENSPANG00000032970	ARF5	100	85.000	Papio_anubis
ENSLBEG00000012002	-	99	84.444	ENSPKIG00000025349	arf4a	100	84.444	Paramormyrops_kingsleyae
ENSLBEG00000012002	-	98	85.955	ENSPKIG00000013814	-	99	85.955	Paramormyrops_kingsleyae
ENSLBEG00000012002	-	99	85.556	ENSPKIG00000025381	-	100	85.556	Paramormyrops_kingsleyae
ENSLBEG00000012002	-	99	83.333	ENSPMGG00000009985	-	100	83.333	Periophthalmus_magnuspinnatus
ENSLBEG00000012002	-	99	85.000	ENSPEMG00000021476	Arf5	100	85.000	Peromyscus_maniculatus_bairdii
ENSLBEG00000012002	-	98	79.213	ENSPMAG00000009600	arf4a	99	79.213	Petromyzon_marinus
ENSLBEG00000012002	-	98	84.358	ENSPFOG00000017992	-	99	84.358	Poecilia_formosa
ENSLBEG00000012002	-	99	87.222	ENSPFOG00000015817	arf5	100	87.222	Poecilia_formosa
ENSLBEG00000012002	-	99	87.222	ENSPLAG00000006742	arf5	100	87.222	Poecilia_latipinna
ENSLBEG00000012002	-	98	84.831	ENSPLAG00000015630	-	99	84.831	Poecilia_latipinna
ENSLBEG00000012002	-	99	87.222	ENSPMEG00000009605	arf5	100	87.222	Poecilia_mexicana
ENSLBEG00000012002	-	98	84.831	ENSPMEG00000004624	-	99	84.831	Poecilia_mexicana
ENSLBEG00000012002	-	99	85.000	ENSPCOG00000027640	ARF5	100	85.000	Propithecus_coquereli
ENSLBEG00000012002	-	99	85.000	ENSPVAG00000013940	ARF5	100	85.000	Pteropus_vampyrus
ENSLBEG00000012002	-	99	87.222	ENSPNYG00000001663	arf5	100	87.222	Pundamilia_nyererei
ENSLBEG00000012002	-	98	86.517	ENSPNYG00000004931	-	99	86.517	Pundamilia_nyererei
ENSLBEG00000012002	-	99	86.111	ENSPNAG00000024427	-	100	86.111	Pygocentrus_nattereri
ENSLBEG00000012002	-	99	85.000	ENSPNAG00000004745	arf4a	100	85.000	Pygocentrus_nattereri
ENSLBEG00000012002	-	99	70.000	ENSPNAG00000004475	-	100	70.000	Pygocentrus_nattereri
ENSLBEG00000012002	-	99	73.889	ENSPNAG00000005054	-	100	73.889	Pygocentrus_nattereri
ENSLBEG00000012002	-	99	85.000	ENSRNOG00000007806	Arf5	100	85.000	Rattus_norvegicus
ENSLBEG00000012002	-	99	85.000	ENSRBIG00000039868	ARF5	100	85.000	Rhinopithecus_bieti
ENSLBEG00000012002	-	99	85.000	ENSRROG00000041157	ARF5	100	85.000	Rhinopithecus_roxellana
ENSLBEG00000012002	-	99	85.000	ENSSBOG00000021669	ARF5	100	85.000	Saimiri_boliviensis_boliviensis
ENSLBEG00000012002	-	99	85.000	ENSSHAG00000015053	ARF5	100	85.000	Sarcophilus_harrisii
ENSLBEG00000012002	-	99	86.667	ENSSFOG00015020707	ARF5	100	86.667	Scleropages_formosus
ENSLBEG00000012002	-	99	76.667	ENSSFOG00015007701	-	100	76.667	Scleropages_formosus
ENSLBEG00000012002	-	98	87.640	ENSSMAG00000004541	-	99	87.640	Scophthalmus_maximus
ENSLBEG00000012002	-	99	85.556	ENSSMAG00000011361	arf5	100	85.556	Scophthalmus_maximus
ENSLBEG00000012002	-	99	86.111	ENSSDUG00000005105	arf5	100	86.111	Seriola_dumerili
ENSLBEG00000012002	-	99	86.111	ENSSLDG00000017188	arf5	100	86.111	Seriola_lalandi_dorsalis
ENSLBEG00000012002	-	98	86.517	ENSSPAG00000022680	-	99	86.517	Stegastes_partitus
ENSLBEG00000012002	-	99	85.000	ENSSPAG00000014434	arf5	100	85.000	Stegastes_partitus
ENSLBEG00000012002	-	99	85.000	ENSSSCG00000016593	ARF5	100	85.000	Sus_scrofa
ENSLBEG00000012002	-	98	79.775	ENSTRUG00000025462	-	99	79.775	Takifugu_rubripes
ENSLBEG00000012002	-	98	85.393	ENSTNIG00000003348	arf5	99	85.393	Tetraodon_nigroviridis
ENSLBEG00000012002	-	98	80.899	ENSTNIG00000017954	-	99	80.899	Tetraodon_nigroviridis
ENSLBEG00000012002	-	90	85.185	ENSTTRG00000006043	ARF5	100	85.185	Tursiops_truncatus
ENSLBEG00000012002	-	99	85.000	ENSUAMG00000012982	ARF5	100	85.000	Ursus_americanus
ENSLBEG00000012002	-	99	85.000	ENSVVUG00000007062	ARF5	100	85.000	Vulpes_vulpes
ENSLBEG00000012002	-	98	84.831	ENSXCOG00000020384	-	99	84.831	Xiphophorus_couchianus
ENSLBEG00000012002	-	98	84.831	ENSXMAG00000004558	-	99	84.831	Xiphophorus_maculatus
ENSLBEG00000012002	-	99	87.222	ENSXMAG00000015306	arf5	100	87.222	Xiphophorus_maculatus