EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000012077 (Gene tree)
Gene ID: 109988751
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 65964 bases
Position: chrFKLU01000001.1:8674711-8740674
Accession: 109988751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015576	ResIII	PF04851.15	2.6e-06	1	1
ENSLBEP00000015527	ResIII	PF04851.15	3.3e-06	1	1
ENSLBEP00000015576	BRK	PF07533.16	3.9e-31	1	2
ENSLBEP00000015576	BRK	PF07533.16	3.9e-31	2	2
ENSLBEP00000015527	BRK	PF07533.16	5.7e-31	1	2
ENSLBEP00000015527	BRK	PF07533.16	5.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000016506	-	11748	-	ENSLBEP00000015576	2504 (aa)	-	-
ENSLBET00000016456	-	13385	XM_020640378	ENSLBEP00000015527	2810 (aa)	XP_020496034	-

Gene Model

Click here to download ENSLBEG00000012077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012077	chd9	99	67.946	ENSG00000177200	CHD9	97	68.558	Homo_sapiens
ENSLBEG00000012077	chd9	99	91.110	ENSAPOG00000023034	chd9	99	90.792	Acanthochromis_polyacanthus
ENSLBEG00000012077	chd9	99	62.566	ENSAMEG00000016232	CHD9	92	63.349	Ailuropoda_melanoleuca
ENSLBEG00000012077	chd9	97	85.106	ENSACIG00000004097	chd9	92	82.311	Amphilophus_citrinellus
ENSLBEG00000012077	chd9	99	91.590	ENSAOCG00000005487	chd9	99	90.788	Amphiprion_ocellaris
ENSLBEG00000012077	chd9	99	91.670	ENSAPEG00000009859	chd9	99	90.869	Amphiprion_percula
ENSLBEG00000012077	chd9	99	90.590	ENSATEG00000002748	chd9	92	87.648	Anabas_testudineus
ENSLBEG00000012077	chd9	98	68.868	ENSAPLG00000002826	CHD9	88	65.346	Anas_platyrhynchos
ENSLBEG00000012077	chd9	67	74.401	ENSACAG00000016150	CHD9	91	63.482	Anolis_carolinensis
ENSLBEG00000012077	chd9	99	62.153	ENSANAG00000015630	CHD9	91	68.310	Aotus_nancymaae
ENSLBEG00000012077	chd9	98	85.910	ENSACLG00000016899	chd9	94	82.998	Astatotilapia_calliptera
ENSLBEG00000012077	chd9	99	76.529	ENSAMXG00000005652	chd9	99	76.240	Astyanax_mexicanus
ENSLBEG00000012077	chd9	99	61.916	ENSBTAG00000002287	CHD9	92	62.791	Bos_taurus
ENSLBEG00000012077	chd9	98	67.861	ENSCJAG00000001573	CHD9	91	68.662	Callithrix_jacchus
ENSLBEG00000012077	chd9	98	68.080	ENSCAFG00000009699	CHD9	92	63.421	Canis_familiaris
ENSLBEG00000012077	chd9	98	68.080	ENSCAFG00020002879	CHD9	91	69.718	Canis_lupus_dingo
ENSLBEG00000012077	chd9	98	67.547	ENSTSYG00000007693	CHD9	91	69.014	Carlito_syrichta
ENSLBEG00000012077	chd9	73	60.442	ENSCAPG00000011604	CHD9	59	61.851	Cavia_aperea
ENSLBEG00000012077	chd9	92	69.372	ENSCPOG00000036544	CHD9	79	66.290	Cavia_porcellus
ENSLBEG00000012077	chd9	66	74.184	ENSCCAG00000036178	CHD9	91	69.965	Cebus_capucinus
ENSLBEG00000012077	chd9	66	74.140	ENSCATG00000036753	CHD9	91	68.750	Cercocebus_atys
ENSLBEG00000012077	chd9	93	64.546	ENSCLAG00000007137	CHD9	99	76.406	Chinchilla_lanigera
ENSLBEG00000012077	chd9	66	74.081	ENSCSAG00000005311	CHD9	88	64.225	Chlorocebus_sabaeus
ENSLBEG00000012077	chd9	65	90.625	ENSCHOG00000003935	CHD9	64	90.576	Choloepus_hoffmanni
ENSLBEG00000012077	chd9	87	81.777	ENSCPBG00000012459	CHD9	82	80.394	Chrysemys_picta_bellii
ENSLBEG00000012077	chd9	66	74.081	ENSCANG00000030349	CHD9	91	69.366	Colobus_angolensis_palliatus
ENSLBEG00000012077	chd9	95	68.778	ENSCGRG00001016150	Chd9	79	69.697	Cricetulus_griseus_chok1gshd
ENSLBEG00000012077	chd9	95	68.778	ENSCGRG00000012850	Chd9	99	76.269	Cricetulus_griseus_crigri
ENSLBEG00000012077	chd9	99	85.686	ENSCSEG00000009209	chd9	99	83.713	Cynoglossus_semilaevis
ENSLBEG00000012077	chd9	94	87.083	ENSCVAG00000016195	chd9	93	81.380	Cyprinodon_variegatus
ENSLBEG00000012077	chd9	99	76.356	ENSDARG00000074498	chd9	97	77.578	Danio_rerio
ENSLBEG00000012077	chd9	95	68.642	ENSDNOG00000006045	CHD9	93	70.947	Dasypus_novemcinctus
ENSLBEG00000012077	chd9	79	69.524	ENSDORG00000008523	-	96	69.714	Dipodomys_ordii
ENSLBEG00000012077	chd9	56	91.270	ENSETEG00000009565	CHD9	83	91.270	Echinops_telfairi
ENSLBEG00000012077	chd9	98	66.173	ENSEASG00005014832	CHD9	95	77.793	Equus_asinus_asinus
ENSLBEG00000012077	chd9	66	74.037	ENSECAG00000011505	CHD9	92	62.807	Equus_caballus
ENSLBEG00000012077	chd9	74	84.783	ENSEEUG00000014515	CHD9	68	83.425	Erinaceus_europaeus
ENSLBEG00000012077	chd9	99	77.826	ENSELUG00000006031	chd9	99	78.092	Esox_lucius
ENSLBEG00000012077	chd9	98	68.094	ENSFCAG00000022534	CHD9	91	70.070	Felis_catus
ENSLBEG00000012077	chd9	99	68.706	ENSFALG00000013276	CHD9	97	69.874	Ficedula_albicollis
ENSLBEG00000012077	chd9	93	63.883	ENSFDAG00000021037	CHD9	89	63.386	Fukomys_damarensis
ENSLBEG00000012077	chd9	96	88.021	ENSFHEG00000006068	chd9	96	87.495	Fundulus_heteroclitus
ENSLBEG00000012077	chd9	79	86.139	ENSGMOG00000006040	chd9	84	86.014	Gadus_morhua
ENSLBEG00000012077	chd9	93	70.782	ENSGALG00000039178	CHD9	91	66.274	Gallus_gallus
ENSLBEG00000012077	chd9	99	87.405	ENSGAFG00000010014	chd9	99	87.370	Gambusia_affinis
ENSLBEG00000012077	chd9	66	74.081	ENSGGOG00000014816	CHD9	91	69.014	Gorilla_gorilla
ENSLBEG00000012077	chd9	99	86.787	ENSHBUG00000023322	chd9	99	87.555	Haplochromis_burtoni
ENSLBEG00000012077	chd9	95	68.902	ENSHGLG00000014938	CHD9	99	76.269	Heterocephalus_glaber_female
ENSLBEG00000012077	chd9	96	83.135	ENSHCOG00000000937	chd9	97	83.511	Hippocampus_comes
ENSLBEG00000012077	chd9	99	77.056	ENSIPUG00000016448	chd9	96	77.906	Ictalurus_punctatus
ENSLBEG00000012077	chd9	96	63.362	ENSSTOG00000022273	CHD9	99	74.945	Ictidomys_tridecemlineatus
ENSLBEG00000012077	chd9	81	68.467	ENSJJAG00000015741	-	96	69.346	Jaculus_jaculus
ENSLBEG00000012077	chd9	96	89.582	ENSKMAG00000016784	chd9	99	88.684	Kryptolebias_marmoratus
ENSLBEG00000012077	chd9	95	66.215	ENSLACG00000005557	CHD9	88	62.238	Latimeria_chalumnae
ENSLBEG00000012077	chd9	99	74.881	ENSLOCG00000007225	chd9	97	76.372	Lepisosteus_oculatus
ENSLBEG00000012077	chd9	66	73.389	ENSLAFG00000015374	CHD9	92	62.233	Loxodonta_africana
ENSLBEG00000012077	chd9	94	69.327	ENSMFAG00000041354	CHD9	92	70.645	Macaca_fascicularis
ENSLBEG00000012077	chd9	66	74.140	ENSMMUG00000016310	CHD9	91	69.366	Macaca_mulatta
ENSLBEG00000012077	chd9	98	68.053	ENSMNEG00000031494	CHD9	80	71.985	Macaca_nemestrina
ENSLBEG00000012077	chd9	66	74.140	ENSMLEG00000043219	CHD9	91	69.366	Mandrillus_leucophaeus
ENSLBEG00000012077	chd9	99	90.436	ENSMAMG00000003909	chd9	92	87.284	Mastacembelus_armatus
ENSLBEG00000012077	chd9	99	88.956	ENSMZEG00005006581	chd9	99	89.041	Maylandia_zebra
ENSLBEG00000012077	chd9	98	64.064	ENSMGAG00000004642	CHD9	69	63.972	Meleagris_gallopavo
ENSLBEG00000012077	chd9	98	67.805	ENSMICG00000016679	CHD9	91	70.070	Microcebus_murinus
ENSLBEG00000012077	chd9	98	85.466	ENSMMOG00000016406	chd9	94	81.750	Mola_mola
ENSLBEG00000012077	chd9	87	72.248	ENSMODG00000013142	-	96	77.383	Monodelphis_domestica
ENSLBEG00000012077	chd9	98	87.728	ENSMALG00000013306	chd9	94	84.273	Monopterus_albus
ENSLBEG00000012077	chd9	66	73.066	MGP_CAROLIEiJ_G0031364	Chd9	88	64.238	Mus_caroli
ENSLBEG00000012077	chd9	95	68.161	ENSMUSG00000056608	Chd9	99	75.801	Mus_musculus
ENSLBEG00000012077	chd9	95	67.467	MGP_PahariEiJ_G0022964	Chd9	92	61.400	Mus_pahari
ENSLBEG00000012077	chd9	66	73.029	MGP_SPRETEiJ_G0032483	Chd9	88	64.253	Mus_spretus
ENSLBEG00000012077	chd9	99	62.141	ENSMPUG00000003285	CHD9	79	69.703	Mustela_putorius_furo
ENSLBEG00000012077	chd9	65	75.182	ENSMLUG00000004456	CHD9	79	68.643	Myotis_lucifugus
ENSLBEG00000012077	chd9	99	88.389	ENSNBRG00000009423	chd9	99	88.394	Neolamprologus_brichardi
ENSLBEG00000012077	chd9	86	70.717	ENSNLEG00000001026	CHD9	80	72.000	Nomascus_leucogenys
ENSLBEG00000012077	chd9	72	96.241	ENSMEUG00000008222	-	69	88.750	Notamacropus_eugenii
ENSLBEG00000012077	chd9	75	96.241	ENSOPRG00000011168	CHD9	65	85.196	Ochotona_princeps
ENSLBEG00000012077	chd9	93	64.015	ENSODEG00000004466	CHD9	79	69.285	Octodon_degus
ENSLBEG00000012077	chd9	97	88.274	ENSONIG00000002816	chd9	96	89.713	Oreochromis_niloticus
ENSLBEG00000012077	chd9	67	74.282	ENSOANG00000013401	CHD9	84	68.300	Ornithorhynchus_anatinus
ENSLBEG00000012077	chd9	99	67.684	ENSOCUG00000001016	CHD9	96	68.357	Oryctolagus_cuniculus
ENSLBEG00000012077	chd9	96	87.588	ENSORLG00000013810	chd9	96	85.503	Oryzias_latipes
ENSLBEG00000012077	chd9	96	83.243	ENSORLG00020020665	chd9	91	79.357	Oryzias_latipes_hni
ENSLBEG00000012077	chd9	96	87.808	ENSORLG00015019126	chd9	96	88.177	Oryzias_latipes_hsok
ENSLBEG00000012077	chd9	54	89.091	ENSOMEG00000015978	chd9	91	80.994	Oryzias_melastigma
ENSLBEG00000012077	chd9	98	67.734	ENSOGAG00000002110	CHD9	86	65.957	Otolemur_garnettii
ENSLBEG00000012077	chd9	99	61.921	ENSOARG00000017664	CHD9	92	62.607	Ovis_aries
ENSLBEG00000012077	chd9	96	67.953	ENSPPAG00000039388	-	95	69.124	Pan_paniscus
ENSLBEG00000012077	chd9	98	68.054	ENSPPRG00000004801	CHD9	91	69.718	Panthera_pardus
ENSLBEG00000012077	chd9	98	67.080	ENSPTIG00000021854	CHD9	91	61.268	Panthera_tigris_altaica
ENSLBEG00000012077	chd9	99	62.271	ENSPTRG00000008113	CHD9	91	69.014	Pan_troglodytes
ENSLBEG00000012077	chd9	99	67.642	ENSPANG00000019307	CHD9	97	68.395	Papio_anubis
ENSLBEG00000012077	chd9	95	76.779	ENSPKIG00000021876	chd9	96	78.049	Paramormyrops_kingsleyae
ENSLBEG00000012077	chd9	95	72.095	ENSPKIG00000025401	-	87	69.228	Paramormyrops_kingsleyae
ENSLBEG00000012077	chd9	56	76.597	ENSPSIG00000008099	CHD9	85	68.514	Pelodiscus_sinensis
ENSLBEG00000012077	chd9	85	70.458	ENSPCIG00000017215	CHD9	98	71.590	Phascolarctos_cinereus
ENSLBEG00000012077	chd9	96	88.930	ENSPFOG00000015839	chd9	92	84.522	Poecilia_formosa
ENSLBEG00000012077	chd9	96	89.095	ENSPLAG00000011118	chd9	99	87.931	Poecilia_latipinna
ENSLBEG00000012077	chd9	96	86.650	ENSPMEG00000015106	chd9	93	82.623	Poecilia_mexicana
ENSLBEG00000012077	chd9	96	89.293	ENSPREG00000006473	chd9	96	88.976	Poecilia_reticulata
ENSLBEG00000012077	chd9	66	74.021	ENSPPYG00000007348	CHD9	79	69.674	Pongo_abelii
ENSLBEG00000012077	chd9	68	78.649	ENSPCAG00000007564	CHD9	68	80.859	Procavia_capensis
ENSLBEG00000012077	chd9	96	61.788	ENSPCOG00000028433	CHD9	91	69.014	Propithecus_coquereli
ENSLBEG00000012077	chd9	95	71.308	ENSPVAG00000015617	CHD9	76	72.958	Pteropus_vampyrus
ENSLBEG00000012077	chd9	99	88.755	ENSPNYG00000010947	chd9	99	88.278	Pundamilia_nyererei
ENSLBEG00000012077	chd9	99	77.350	ENSPNAG00000024141	chd9	97	78.330	Pygocentrus_nattereri
ENSLBEG00000012077	chd9	84	63.223	ENSRNOG00000049302	Chd9	90	63.205	Rattus_norvegicus
ENSLBEG00000012077	chd9	98	67.946	ENSRBIG00000035553	CHD9	95	69.716	Rhinopithecus_bieti
ENSLBEG00000012077	chd9	96	68.831	ENSRROG00000033278	CHD9	96	69.729	Rhinopithecus_roxellana
ENSLBEG00000012077	chd9	98	67.827	ENSSBOG00000030240	CHD9	91	68.662	Saimiri_boliviensis_boliviensis
ENSLBEG00000012077	chd9	98	68.329	ENSSHAG00000002719	CHD9	88	65.723	Sarcophilus_harrisii
ENSLBEG00000012077	chd9	98	73.074	ENSSFOG00015001327	chd9	96	73.952	Scleropages_formosus
ENSLBEG00000012077	chd9	96	77.515	ENSSFOG00015020209	chd9	97	77.331	Scleropages_formosus
ENSLBEG00000012077	chd9	96	91.498	ENSSMAG00000008953	chd9	99	90.293	Scophthalmus_maximus
ENSLBEG00000012077	chd9	99	91.359	ENSSDUG00000006139	chd9	99	91.241	Seriola_dumerili
ENSLBEG00000012077	chd9	99	91.680	ENSSLDG00000017818	chd9	99	91.724	Seriola_lalandi_dorsalis
ENSLBEG00000012077	chd9	68	76.711	ENSSARG00000010632	CHD9	65	77.200	Sorex_araneus
ENSLBEG00000012077	chd9	99	91.516	ENSSPAG00000021649	chd9	99	91.238	Stegastes_partitus
ENSLBEG00000012077	chd9	98	66.680	ENSSSCG00000033591	CHD9	69	64.600	Sus_scrofa
ENSLBEG00000012077	chd9	86	72.197	ENSTGUG00000007476	CHD9	90	66.912	Taeniopygia_guttata
ENSLBEG00000012077	chd9	99	85.345	ENSTRUG00000009125	chd9	94	83.094	Takifugu_rubripes
ENSLBEG00000012077	chd9	77	68.894	ENSTNIG00000003825	chd9	84	99.408	Tetraodon_nigroviridis
ENSLBEG00000012077	chd9	61	94.915	ENSTBEG00000016052	-	59	94.915	Tupaia_belangeri
ENSLBEG00000012077	chd9	84	70.638	ENSTTRG00000012674	CHD9	82	64.081	Tursiops_truncatus
ENSLBEG00000012077	chd9	76	66.251	ENSUAMG00000022706	CHD9	95	67.493	Ursus_americanus
ENSLBEG00000012077	chd9	75	85.266	ENSUMAG00000004043	CHD9	95	85.266	Ursus_maritimus
ENSLBEG00000012077	chd9	96	67.683	ENSVPAG00000001374	CHD9	77	68.729	Vicugna_pacos
ENSLBEG00000012077	chd9	98	68.054	ENSVVUG00000019435	CHD9	92	63.394	Vulpes_vulpes
ENSLBEG00000012077	chd9	97	66.049	ENSXETG00000000349	chd9	92	66.650	Xenopus_tropicalis
ENSLBEG00000012077	chd9	96	88.391	ENSXCOG00000012997	chd9	96	88.640	Xiphophorus_couchianus
ENSLBEG00000012077	chd9	96	89.674	ENSXMAG00000016192	chd9	96	89.792	Xiphophorus_maculatus