EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000012132 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: TRM3|TRMT3|TRP-185
Full Name: probable methyltransferase TARBP1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 19340 bases
Position: chrFKLU01000052.1:1010930-1030269
Accession: 109983194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015671	SpoU_methylase	PF00588.19	8.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000016602	-	4074	XM_020632766	ENSLBEP00000015671	1357 (aa)	XP_020488422	-

Gene Model

Click here to download ENSLBEG00000012132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012132	si:dkey-85a20.4	74	50.536	ENSG00000059588	TARBP1	65	50.536	Homo_sapiens
ENSLBEG00000012132	si:dkey-85a20.4	95	78.075	ENSAPOG00000016419	si:dkey-85a20.4	83	78.075	Acanthochromis_polyacanthus
ENSLBEG00000012132	si:dkey-85a20.4	74	49.398	ENSAMEG00000003359	TARBP1	77	49.264	Ailuropoda_melanoleuca
ENSLBEG00000012132	si:dkey-85a20.4	96	76.260	ENSATEG00000020266	si:dkey-85a20.4	83	76.260	Anabas_testudineus
ENSLBEG00000012132	si:dkey-85a20.4	71	51.747	ENSAPLG00000007666	TARBP1	75	51.747	Anas_platyrhynchos
ENSLBEG00000012132	si:dkey-85a20.4	72	46.780	ENSACAG00000001142	TARBP1	64	46.780	Anolis_carolinensis
ENSLBEG00000012132	si:dkey-85a20.4	74	50.938	ENSANAG00000022031	TARBP1	67	50.804	Aotus_nancymaae
ENSLBEG00000012132	si:dkey-85a20.4	78	50.067	ENSBTAG00000004517	TARBP1	73	49.933	Bos_taurus
ENSLBEG00000012132	si:dkey-85a20.4	74	50.599	ENSCJAG00000018155	TARBP1	65	50.466	Callithrix_jacchus
ENSLBEG00000012132	si:dkey-85a20.4	74	50.335	ENSCAFG00000011533	TARBP1	75	49.802	Canis_familiaris
ENSLBEG00000012132	si:dkey-85a20.4	74	50.201	ENSCAFG00020027141	TARBP1	65	50.067	Canis_lupus_dingo
ENSLBEG00000012132	si:dkey-85a20.4	77	49.865	ENSCHIG00000011437	TARBP1	65	49.865	Capra_hircus
ENSLBEG00000012132	si:dkey-85a20.4	71	50.270	ENSTSYG00000010382	TARBP1	75	50.270	Carlito_syrichta
ENSLBEG00000012132	si:dkey-85a20.4	71	48.461	ENSCAPG00000010831	TARBP1	75	54.444	Cavia_aperea
ENSLBEG00000012132	si:dkey-85a20.4	79	50.863	ENSCPOG00000013995	TARBP1	65	50.863	Cavia_porcellus
ENSLBEG00000012132	si:dkey-85a20.4	74	50.798	ENSCCAG00000037278	TARBP1	65	50.798	Cebus_capucinus
ENSLBEG00000012132	si:dkey-85a20.4	75	50.732	ENSCATG00000011754	TARBP1	65	50.599	Cercocebus_atys
ENSLBEG00000012132	si:dkey-85a20.4	71	50.866	ENSCLAG00000003655	TARBP1	74	50.667	Chinchilla_lanigera
ENSLBEG00000012132	si:dkey-85a20.4	68	50.599	ENSCSAG00000010100	TARBP1	76	50.466	Chlorocebus_sabaeus
ENSLBEG00000012132	si:dkey-85a20.4	78	43.396	ENSCPBG00000005587	TARBP1	73	47.489	Chrysemys_picta_bellii
ENSLBEG00000012132	si:dkey-85a20.4	74	50.398	ENSCANG00000034343	TARBP1	77	50.265	Colobus_angolensis_palliatus
ENSLBEG00000012132	si:dkey-85a20.4	86	49.933	ENSCGRG00001016690	Tarbp1	67	49.933	Cricetulus_griseus_chok1gshd
ENSLBEG00000012132	si:dkey-85a20.4	79	49.933	ENSCGRG00000016893	Tarbp1	72	49.933	Cricetulus_griseus_crigri
ENSLBEG00000012132	si:dkey-85a20.4	95	75.000	ENSCSEG00000005255	si:dkey-85a20.4	84	75.000	Cynoglossus_semilaevis
ENSLBEG00000012132	si:dkey-85a20.4	86	65.527	ENSDARG00000079055	si:dkey-85a20.4	99	70.568	Danio_rerio
ENSLBEG00000012132	si:dkey-85a20.4	83	50.868	ENSDNOG00000008637	TARBP1	64	50.734	Dasypus_novemcinctus
ENSLBEG00000012132	si:dkey-85a20.4	69	51.282	ENSDORG00000007984	Tarbp1	76	51.282	Dipodomys_ordii
ENSLBEG00000012132	si:dkey-85a20.4	74	50.538	ENSEASG00005000252	TARBP1	66	50.403	Equus_asinus_asinus
ENSLBEG00000012132	si:dkey-85a20.4	74	50.134	ENSECAG00000023673	TARBP1	69	50.134	Equus_caballus
ENSLBEG00000012132	si:dkey-85a20.4	87	67.760	ENSELUG00000012193	si:dkey-85a20.4	80	67.760	Esox_lucius
ENSLBEG00000012132	si:dkey-85a20.4	79	48.417	ENSFCAG00000014183	TARBP1	65	48.417	Felis_catus
ENSLBEG00000012132	si:dkey-85a20.4	68	50.672	ENSFALG00000013565	TARBP1	74	50.649	Ficedula_albicollis
ENSLBEG00000012132	si:dkey-85a20.4	69	49.422	ENSFDAG00000001308	TARBP1	79	49.233	Fukomys_damarensis
ENSLBEG00000012132	si:dkey-85a20.4	94	71.429	ENSFHEG00000007565	si:dkey-85a20.4	95	71.429	Fundulus_heteroclitus
ENSLBEG00000012132	si:dkey-85a20.4	78	66.579	ENSGMOG00000004549	si:dkey-85a20.4	80	66.535	Gadus_morhua
ENSLBEG00000012132	si:dkey-85a20.4	77	50.269	ENSGALG00000011000	TARBP1	73	50.067	Gallus_gallus
ENSLBEG00000012132	si:dkey-85a20.4	94	76.543	ENSGAFG00000007387	si:dkey-85a20.4	82	76.543	Gambusia_affinis
ENSLBEG00000012132	si:dkey-85a20.4	80	77.291	ENSGACG00000005865	si:dkey-85a20.4	80	77.291	Gasterosteus_aculeatus
ENSLBEG00000012132	si:dkey-85a20.4	84	47.653	ENSGAGG00000012102	TARBP1	78	51.135	Gopherus_agassizii
ENSLBEG00000012132	si:dkey-85a20.4	78	48.257	ENSGGOG00000022879	TARBP1	76	48.123	Gorilla_gorilla
ENSLBEG00000012132	si:dkey-85a20.4	97	77.822	ENSHBUG00000008877	si:dkey-85a20.4	84	77.822	Haplochromis_burtoni
ENSLBEG00000012132	si:dkey-85a20.4	79	50.794	ENSHGLG00000011592	TARBP1	67	50.794	Heterocephalus_glaber_female
ENSLBEG00000012132	si:dkey-85a20.4	80	50.585	ENSHGLG00100015169	TARBP1	75	50.455	Heterocephalus_glaber_male
ENSLBEG00000012132	si:dkey-85a20.4	90	63.919	ENSIPUG00000005249	si:dkey-85a20.4	74	63.919	Ictalurus_punctatus
ENSLBEG00000012132	si:dkey-85a20.4	73	49.262	ENSSTOG00000032291	TARBP1	74	49.262	Ictidomys_tridecemlineatus
ENSLBEG00000012132	si:dkey-85a20.4	79	49.736	ENSJJAG00000017840	Tarbp1	81	49.735	Jaculus_jaculus
ENSLBEG00000012132	si:dkey-85a20.4	99	62.448	ENSKMAG00000017546	si:dkey-85a20.4	96	62.726	Kryptolebias_marmoratus
ENSLBEG00000012132	si:dkey-85a20.4	91	62.313	ENSLOCG00000016214	si:dkey-85a20.4	77	62.313	Lepisosteus_oculatus
ENSLBEG00000012132	si:dkey-85a20.4	74	50.599	ENSLAFG00000011394	TARBP1	67	50.466	Loxodonta_africana
ENSLBEG00000012132	si:dkey-85a20.4	75	50.732	ENSMFAG00000041068	TARBP1	66	50.599	Macaca_fascicularis
ENSLBEG00000012132	si:dkey-85a20.4	75	50.732	ENSMMUG00000021703	TARBP1	65	50.599	Macaca_mulatta
ENSLBEG00000012132	si:dkey-85a20.4	75	50.599	ENSMNEG00000045002	TARBP1	65	50.599	Macaca_nemestrina
ENSLBEG00000012132	si:dkey-85a20.4	74	50.732	ENSMLEG00000044182	TARBP1	77	50.732	Mandrillus_leucophaeus
ENSLBEG00000012132	si:dkey-85a20.4	91	78.075	ENSMAMG00000021760	si:dkey-85a20.4	81	78.075	Mastacembelus_armatus
ENSLBEG00000012132	si:dkey-85a20.4	97	77.689	ENSMZEG00005005751	si:dkey-85a20.4	84	77.689	Maylandia_zebra
ENSLBEG00000012132	si:dkey-85a20.4	86	49.337	ENSMAUG00000020968	Tarbp1	67	49.337	Mesocricetus_auratus
ENSLBEG00000012132	si:dkey-85a20.4	74	46.559	ENSMICG00000015280	TARBP1	64	46.559	Microcebus_murinus
ENSLBEG00000012132	si:dkey-85a20.4	87	48.681	ENSMOCG00000004128	Tarbp1	68	48.681	Microtus_ochrogaster
ENSLBEG00000012132	si:dkey-85a20.4	93	78.483	ENSMMOG00000007795	si:dkey-85a20.4	85	77.824	Mola_mola
ENSLBEG00000012132	si:dkey-85a20.4	77	50.000	ENSMODG00000008504	TARBP1	64	50.000	Monodelphis_domestica
ENSLBEG00000012132	si:dkey-85a20.4	92	77.703	ENSMALG00000002916	si:dkey-85a20.4	81	77.703	Monopterus_albus
ENSLBEG00000012132	si:dkey-85a20.4	85	49.404	MGP_CAROLIEiJ_G0031729	Tarbp1	80	59.245	Mus_caroli
ENSLBEG00000012132	si:dkey-85a20.4	86	48.939	ENSMUSG00000090290	Tarbp1	67	48.939	Mus_musculus
ENSLBEG00000012132	si:dkey-85a20.4	89	48.939	MGP_PahariEiJ_G0023326	Tarbp1	67	48.939	Mus_pahari
ENSLBEG00000012132	si:dkey-85a20.4	86	49.465	MGP_SPRETEiJ_G0032846	Tarbp1	67	49.465	Mus_spretus
ENSLBEG00000012132	si:dkey-85a20.4	66	50.510	ENSMPUG00000002802	TARBP1	75	50.510	Mustela_putorius_furo
ENSLBEG00000012132	si:dkey-85a20.4	79	47.791	ENSMLUG00000002414	TARBP1	77	47.779	Myotis_lucifugus
ENSLBEG00000012132	si:dkey-85a20.4	74	50.532	ENSNLEG00000002518	TARBP1	65	50.665	Nomascus_leucogenys
ENSLBEG00000012132	si:dkey-85a20.4	70	52.545	ENSOPRG00000013822	TARBP1	57	52.545	Ochotona_princeps
ENSLBEG00000012132	si:dkey-85a20.4	83	50.526	ENSODEG00000005238	TARBP1	69	50.395	Octodon_degus
ENSLBEG00000012132	si:dkey-85a20.4	80	78.059	ENSONIG00000009789	si:dkey-85a20.4	81	78.059	Oreochromis_niloticus
ENSLBEG00000012132	si:dkey-85a20.4	78	49.062	ENSOCUG00000017418	TARBP1	65	49.062	Oryctolagus_cuniculus
ENSLBEG00000012132	si:dkey-85a20.4	93	72.727	ENSORLG00000010529	si:dkey-85a20.4	81	72.727	Oryzias_latipes
ENSLBEG00000012132	si:dkey-85a20.4	92	72.727	ENSORLG00020019264	si:dkey-85a20.4	80	72.727	Oryzias_latipes_hni
ENSLBEG00000012132	si:dkey-85a20.4	93	72.727	ENSORLG00015003276	si:dkey-85a20.4	81	72.727	Oryzias_latipes_hsok
ENSLBEG00000012132	si:dkey-85a20.4	75	47.106	ENSOGAG00000002379	TARBP1	65	47.106	Otolemur_garnettii
ENSLBEG00000012132	si:dkey-85a20.4	74	50.000	ENSOARG00000003434	TARBP1	70	50.000	Ovis_aries
ENSLBEG00000012132	si:dkey-85a20.4	74	50.536	ENSPPAG00000028097	TARBP1	77	50.402	Pan_paniscus
ENSLBEG00000012132	si:dkey-85a20.4	75	48.895	ENSPPRG00000013561	TARBP1	71	48.765	Panthera_pardus
ENSLBEG00000012132	si:dkey-85a20.4	77	48.765	ENSPTIG00000009281	TARBP1	78	48.765	Panthera_tigris_altaica
ENSLBEG00000012132	si:dkey-85a20.4	75	50.670	ENSPTRG00000002124	TARBP1	65	50.536	Pan_troglodytes
ENSLBEG00000012132	si:dkey-85a20.4	75	50.604	ENSPANG00000021933	TARBP1	65	50.470	Papio_anubis
ENSLBEG00000012132	si:dkey-85a20.4	93	63.852	ENSPKIG00000016716	si:dkey-85a20.4	81	63.852	Paramormyrops_kingsleyae
ENSLBEG00000012132	si:dkey-85a20.4	70	51.070	ENSPSIG00000010699	TARBP1	74	51.070	Pelodiscus_sinensis
ENSLBEG00000012132	si:dkey-85a20.4	79	48.868	ENSPEMG00000006888	Tarbp1	71	48.868	Peromyscus_maniculatus_bairdii
ENSLBEG00000012132	si:dkey-85a20.4	64	69.792	ENSPCIG00000029710	TARBP1	60	69.792	Phascolarctos_cinereus
ENSLBEG00000012132	si:dkey-85a20.4	81	72.149	ENSPFOG00000013020	si:dkey-85a20.4	81	72.546	Poecilia_formosa
ENSLBEG00000012132	si:dkey-85a20.4	94	72.667	ENSPLAG00000006044	si:dkey-85a20.4	82	73.067	Poecilia_latipinna
ENSLBEG00000012132	si:dkey-85a20.4	94	72.800	ENSPMEG00000017857	si:dkey-85a20.4	82	73.200	Poecilia_mexicana
ENSLBEG00000012132	si:dkey-85a20.4	96	72.594	ENSPREG00000022753	si:dkey-85a20.4	82	74.074	Poecilia_reticulata
ENSLBEG00000012132	si:dkey-85a20.4	64	50.596	ENSPPYG00000000102	TARBP1	61	50.464	Pongo_abelii
ENSLBEG00000012132	si:dkey-85a20.4	74	48.000	ENSPCOG00000005666	TARBP1	65	48.000	Propithecus_coquereli
ENSLBEG00000012132	si:dkey-85a20.4	69	57.785	ENSPVAG00000014798	TARBP1	63	55.272	Pteropus_vampyrus
ENSLBEG00000012132	si:dkey-85a20.4	94	78.552	ENSPNYG00000019135	si:dkey-85a20.4	87	78.552	Pundamilia_nyererei
ENSLBEG00000012132	si:dkey-85a20.4	78	46.490	ENSRNOG00000053574	Tarbp1	67	46.541	Rattus_norvegicus
ENSLBEG00000012132	si:dkey-85a20.4	75	50.331	ENSRBIG00000043362	TARBP1	72	50.331	Rhinopithecus_bieti
ENSLBEG00000012132	si:dkey-85a20.4	75	50.596	ENSRROG00000029527	TARBP1	68	50.464	Rhinopithecus_roxellana
ENSLBEG00000012132	si:dkey-85a20.4	74	50.400	ENSSBOG00000034503	TARBP1	75	50.400	Saimiri_boliviensis_boliviensis
ENSLBEG00000012132	si:dkey-85a20.4	73	50.931	ENSSHAG00000000013	TARBP1	77	50.931	Sarcophilus_harrisii
ENSLBEG00000012132	si:dkey-85a20.4	85	65.067	ENSSFOG00015002660	si:dkey-85a20.4	78	65.067	Scleropages_formosus
ENSLBEG00000012132	si:dkey-85a20.4	95	79.470	ENSSMAG00000007081	si:dkey-85a20.4	83	79.470	Scophthalmus_maximus
ENSLBEG00000012132	si:dkey-85a20.4	93	78.804	ENSSDUG00000023566	si:dkey-85a20.4	87	78.697	Seriola_dumerili
ENSLBEG00000012132	si:dkey-85a20.4	96	80.293	ENSSLDG00000020200	si:dkey-85a20.4	83	80.293	Seriola_lalandi_dorsalis
ENSLBEG00000012132	si:dkey-85a20.4	64	56.351	ENSSARG00000012207	TARBP1	57	56.351	Sorex_araneus
ENSLBEG00000012132	si:dkey-85a20.4	79	49.844	ENSSPUG00000015364	TARBP1	72	49.844	Sphenodon_punctatus
ENSLBEG00000012132	si:dkey-85a20.4	95	78.296	ENSSPAG00000007213	si:dkey-85a20.4	83	78.296	Stegastes_partitus
ENSLBEG00000012132	si:dkey-85a20.4	78	50.538	ENSSSCG00000010160	TARBP1	65	50.538	Sus_scrofa
ENSLBEG00000012132	si:dkey-85a20.4	68	50.216	ENSTGUG00000010214	TARBP1	74	50.216	Taeniopygia_guttata
ENSLBEG00000012132	si:dkey-85a20.4	92	70.626	ENSTNIG00000016586	si:dkey-85a20.4	84	72.848	Tetraodon_nigroviridis
ENSLBEG00000012132	si:dkey-85a20.4	63	54.478	ENSTTRG00000008707	TARBP1	58	54.478	Tursiops_truncatus
ENSLBEG00000012132	si:dkey-85a20.4	74	49.398	ENSUMAG00000006730	TARBP1	76	48.883	Ursus_maritimus
ENSLBEG00000012132	si:dkey-85a20.4	59	74.000	ENSVPAG00000007665	TARBP1	57	74.000	Vicugna_pacos
ENSLBEG00000012132	si:dkey-85a20.4	76	49.130	ENSVVUG00000007460	TARBP1	87	48.853	Vulpes_vulpes
ENSLBEG00000012132	si:dkey-85a20.4	77	47.581	ENSXETG00000016224	tarbp1	75	47.581	Xenopus_tropicalis
ENSLBEG00000012132	si:dkey-85a20.4	88	62.383	ENSXCOG00000011779	si:dkey-85a20.4	87	72.891	Xiphophorus_couchianus
ENSLBEG00000012132	si:dkey-85a20.4	58	70.959	ENSXMAG00000009600	si:dkey-85a20.4	79	92.308	Xiphophorus_maculatus