EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000012182 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4709 bases
Position: chrFKLU01005929.1:1318-6026
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015699	RVT_1	PF00078.27	3.2e-38	1	1
ENSLBEP00000015699	Exo_endo_phos	PF03372.23	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000016630	-	4709	-	ENSLBEP00000015699	1323 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000012182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000012182	-	78	100.000	ENSLBEG00000008569	-	100	100.000
ENSLBEG00000012182	-	59	98.842	ENSLBEG00000022930	-	94	98.842
ENSLBEG00000012182	-	68	42.795	ENSLBEG00000011646	-	94	42.904
ENSLBEG00000012182	-	72	99.895	ENSLBEG00000009538	-	100	99.895
ENSLBEG00000012182	-	72	100.000	ENSLBEG00000015201	-	100	100.000
ENSLBEG00000012182	-	69	99.891	ENSLBEG00000011022	-	100	99.891
ENSLBEG00000012182	-	86	40.870	ENSLBEG00000029018	-	99	40.870
ENSLBEG00000012182	-	72	100.000	ENSLBEG00000016824	-	100	100.000
ENSLBEG00000012182	-	72	100.000	ENSLBEG00000014347	-	100	100.000
ENSLBEG00000012182	-	74	41.407	ENSLBEG00000008622	-	99	41.247
ENSLBEG00000012182	-	65	43.265	ENSLBEG00000029028	-	92	43.950
ENSLBEG00000012182	-	70	43.301	ENSLBEG00000013480	-	99	43.408
ENSLBEG00000012182	-	100	98.715	ENSLBEG00000007872	-	100	98.715
ENSLBEG00000012182	-	100	100.000	ENSLBEG00000008483	-	100	100.000
ENSLBEG00000012182	-	100	99.849	ENSLBEG00000007968	-	100	99.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012182	-	98	42.237	ENSATEG00000021554	-	98	42.237	Anabas_testudineus
ENSLBEG00000012182	-	81	48.141	ENSAMXG00000037575	-	98	48.141	Astyanax_mexicanus
ENSLBEG00000012182	-	99	47.843	ENSDARG00000100303	CU638714.1	99	47.843	Danio_rerio
ENSLBEG00000012182	-	99	39.545	ENSDARG00000105157	BX649434.3	98	39.052	Danio_rerio
ENSLBEG00000012182	-	99	41.836	ENSDARG00000101795	CABZ01033394.1	99	41.836	Danio_rerio
ENSLBEG00000012182	-	97	40.738	ENSDARG00000098779	BX547930.4	99	40.435	Danio_rerio
ENSLBEG00000012182	-	97	38.592	ENSGMOG00000001470	-	99	38.621	Gadus_morhua
ENSLBEG00000012182	-	99	40.634	ENSGACG00000000122	-	98	40.255	Gasterosteus_aculeatus
ENSLBEG00000012182	-	67	43.883	ENSKMAG00000017599	-	100	43.883	Kryptolebias_marmoratus
ENSLBEG00000012182	-	68	30.374	ENSORLG00000024817	-	93	30.795	Oryzias_latipes
ENSLBEG00000012182	-	98	55.127	ENSORLG00000024845	-	99	54.476	Oryzias_latipes
ENSLBEG00000012182	-	84	40.787	ENSORLG00000024114	-	99	40.424	Oryzias_latipes
ENSLBEG00000012182	-	98	55.332	ENSORLG00020022348	-	99	54.677	Oryzias_latipes_hni
ENSLBEG00000012182	-	71	30.341	ENSORLG00015019437	-	89	30.795	Oryzias_latipes_hsok
ENSLBEG00000012182	-	100	50.453	ENSOMEG00000013951	-	99	50.453	Oryzias_melastigma
ENSLBEG00000012182	-	99	40.735	ENSSDUG00000006191	-	99	40.919	Seriola_dumerili
ENSLBEG00000012182	-	98	39.464	ENSXMAG00000025449	-	97	39.261	Xiphophorus_maculatus
ENSLBEG00000012182	-	97	40.245	ENSXMAG00000028372	-	99	39.938	Xiphophorus_maculatus
ENSLBEG00000012182	-	98	40.416	ENSXMAG00000028545	-	99	40.216	Xiphophorus_maculatus
ENSLBEG00000012182	-	98	39.387	ENSXMAG00000024932	-	97	39.184	Xiphophorus_maculatus