EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000012213 (Gene tree)
Gene ID: 109996477
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 11212 bases
Position: chrFKLU01000369.1:203834-215045
Accession: 109996477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015741	CPL	PF08144.11	4.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000016672	-	6426	XM_020650615	ENSLBEP00000015741	654 (aa)	XP_020506271	UPI0009B4CE62

Gene Model

Click here to download ENSLBEG00000012213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012213	pum3	99	54.179	ENSG00000080608	PUM3	99	54.111	Homo_sapiens
ENSLBEG00000012213	pum3	100	81.611	ENSAPOG00000020252	pum3	100	81.611	Acanthochromis_polyacanthus
ENSLBEG00000012213	pum3	93	55.609	ENSAMEG00000012187	PUM3	99	53.973	Ailuropoda_melanoleuca
ENSLBEG00000012213	pum3	86	78.369	ENSACIG00000009786	pum3	94	78.369	Amphilophus_citrinellus
ENSLBEG00000012213	pum3	100	82.067	ENSAOCG00000004439	pum3	100	82.067	Amphiprion_ocellaris
ENSLBEG00000012213	pum3	100	82.067	ENSAPEG00000020523	pum3	100	82.067	Amphiprion_percula
ENSLBEG00000012213	pum3	99	81.748	ENSATEG00000005799	pum3	99	82.055	Anabas_testudineus
ENSLBEG00000012213	pum3	94	55.788	ENSAPLG00000002920	PUM3	88	59.537	Anas_platyrhynchos
ENSLBEG00000012213	pum3	85	57.068	ENSACAG00000003174	PUM3	97	57.417	Anolis_carolinensis
ENSLBEG00000012213	pum3	99	54.410	ENSANAG00000024520	PUM3	99	54.545	Aotus_nancymaae
ENSLBEG00000012213	pum3	100	79.363	ENSACLG00000001017	pum3	100	78.907	Astatotilapia_calliptera
ENSLBEG00000012213	pum3	99	63.318	ENSAMXG00000020911	pum3	99	63.014	Astyanax_mexicanus
ENSLBEG00000012213	pum3	93	55.112	ENSBTAG00000013357	PUM3	92	57.023	Bos_taurus
ENSLBEG00000012213	pum3	78	30.250	WBGene00014165	puf-12	67	30.250	Caenorhabditis_elegans
ENSLBEG00000012213	pum3	99	54.111	ENSCJAG00000010917	PUM3	99	53.949	Callithrix_jacchus
ENSLBEG00000012213	pum3	94	54.936	ENSCAFG00000002035	PUM3	99	53.523	Canis_familiaris
ENSLBEG00000012213	pum3	94	54.936	ENSCAFG00020026867	PUM3	99	53.523	Canis_lupus_dingo
ENSLBEG00000012213	pum3	93	55.751	ENSCHIG00000021559	PUM3	99	54.042	Capra_hircus
ENSLBEG00000012213	pum3	99	53.363	ENSTSYG00000007481	PUM3	99	52.994	Carlito_syrichta
ENSLBEG00000012213	pum3	96	52.804	ENSCAPG00000010592	-	92	55.351	Cavia_aperea
ENSLBEG00000012213	pum3	90	56.689	ENSCPOG00000008552	-	92	56.689	Cavia_porcellus
ENSLBEG00000012213	pum3	99	54.260	ENSCCAG00000032650	PUM3	99	53.949	Cebus_capucinus
ENSLBEG00000012213	pum3	99	54.858	ENSCATG00000024880	PUM3	99	54.341	Cercocebus_atys
ENSLBEG00000012213	pum3	93	55.680	ENSCLAG00000011892	PUM3	93	57.166	Chinchilla_lanigera
ENSLBEG00000012213	pum3	99	54.111	ENSCSAG00000008691	PUM3	99	54.042	Chlorocebus_sabaeus
ENSLBEG00000012213	pum3	64	56.057	ENSCHOG00000002535	PUM3	62	56.057	Choloepus_hoffmanni
ENSLBEG00000012213	pum3	99	55.183	ENSCPBG00000025470	PUM3	95	55.775	Chrysemys_picta_bellii
ENSLBEG00000012213	pum3	87	37.973	ENSCING00000024199	-	99	37.973	Ciona_intestinalis
ENSLBEG00000012213	pum3	87	38.540	ENSCSAVG00000006072	-	99	39.238	Ciona_savignyi
ENSLBEG00000012213	pum3	99	53.812	ENSCANG00000006142	PUM3	99	53.961	Colobus_angolensis_palliatus
ENSLBEG00000012213	pum3	99	53.961	ENSCGRG00001016402	Pum3	99	53.961	Cricetulus_griseus_chok1gshd
ENSLBEG00000012213	pum3	99	53.961	ENSCGRG00000010207	Pum3	99	53.961	Cricetulus_griseus_crigri
ENSLBEG00000012213	pum3	89	77.381	ENSCSEG00000001565	pum3	99	77.041	Cynoglossus_semilaevis
ENSLBEG00000012213	pum3	70	68.881	ENSCVAG00000006550	pum3	100	68.881	Cyprinodon_variegatus
ENSLBEG00000012213	pum3	99	63.110	ENSDARG00000087779	pum3	99	62.290	Danio_rerio
ENSLBEG00000012213	pum3	99	46.515	ENSDNOG00000008157	PUM3	70	47.121	Dasypus_novemcinctus
ENSLBEG00000012213	pum3	80	59.619	ENSETEG00000015331	PUM3	82	59.363	Echinops_telfairi
ENSLBEG00000012213	pum3	76	39.412	ENSEBUG00000011586	pum3	75	39.412	Eptatretus_burgeri
ENSLBEG00000012213	pum3	97	55.243	ENSEASG00005010350	PUM3	99	54.600	Equus_asinus_asinus
ENSLBEG00000012213	pum3	97	55.243	ENSECAG00000017193	PUM3	99	54.600	Equus_caballus
ENSLBEG00000012213	pum3	87	49.488	ENSEEUG00000010314	PUM3	100	48.237	Erinaceus_europaeus
ENSLBEG00000012213	pum3	99	62.857	ENSELUG00000002215	pum3	91	64.696	Esox_lucius
ENSLBEG00000012213	pum3	99	54.709	ENSFALG00000010509	PUM3	99	55.070	Ficedula_albicollis
ENSLBEG00000012213	pum3	99	53.973	ENSFDAG00000021027	PUM3	99	53.973	Fukomys_damarensis
ENSLBEG00000012213	pum3	98	79.387	ENSFHEG00000015576	pum3	100	79.387	Fundulus_heteroclitus
ENSLBEG00000012213	pum3	81	71.241	ENSGMOG00000014217	pum3	99	71.241	Gadus_morhua
ENSLBEG00000012213	pum3	80	62.095	ENSGALG00000010178	PUM3	99	55.869	Gallus_gallus
ENSLBEG00000012213	pum3	55	74.725	ENSGAFG00000001930	pum3	62	74.725	Gambusia_affinis
ENSLBEG00000012213	pum3	83	83.824	ENSGACG00000017878	pum3	99	83.824	Gasterosteus_aculeatus
ENSLBEG00000012213	pum3	95	55.869	ENSGAGG00000018983	PUM3	99	56.752	Gopherus_agassizii
ENSLBEG00000012213	pum3	99	54.111	ENSGGOG00000006143	PUM3	99	53.892	Gorilla_gorilla
ENSLBEG00000012213	pum3	100	67.933	ENSHBUG00000012903	pum3	100	66.109	Haplochromis_burtoni
ENSLBEG00000012213	pum3	99	54.192	ENSHGLG00000015868	-	99	54.204	Heterocephalus_glaber_female
ENSLBEG00000012213	pum3	99	54.192	ENSHGLG00100018825	PUM3	99	54.204	Heterocephalus_glaber_male
ENSLBEG00000012213	pum3	100	72.929	ENSHCOG00000010306	pum3	100	73.661	Hippocampus_comes
ENSLBEG00000012213	pum3	99	61.890	ENSIPUG00000024801	pum3	99	62.100	Ictalurus_punctatus
ENSLBEG00000012213	pum3	96	55.382	ENSSTOG00000009586	PUM3	96	56.180	Ictidomys_tridecemlineatus
ENSLBEG00000012213	pum3	99	53.566	ENSJJAG00000012563	Pum3	99	52.836	Jaculus_jaculus
ENSLBEG00000012213	pum3	100	75.799	ENSKMAG00000010277	pum3	100	76.256	Kryptolebias_marmoratus
ENSLBEG00000012213	pum3	99	53.233	ENSLACG00000008312	PUM3	99	52.790	Latimeria_chalumnae
ENSLBEG00000012213	pum3	100	59.665	ENSLOCG00000012529	pum3	100	59.389	Lepisosteus_oculatus
ENSLBEG00000012213	pum3	94	55.079	ENSLAFG00000017341	PUM3	99	53.523	Loxodonta_africana
ENSLBEG00000012213	pum3	99	54.111	ENSMFAG00000001430	PUM3	99	54.042	Macaca_fascicularis
ENSLBEG00000012213	pum3	99	54.111	ENSMMUG00000002362	PUM3	98	54.042	Macaca_mulatta
ENSLBEG00000012213	pum3	99	54.111	ENSMNEG00000035288	PUM3	99	54.042	Macaca_nemestrina
ENSLBEG00000012213	pum3	99	54.111	ENSMLEG00000034820	PUM3	99	53.949	Mandrillus_leucophaeus
ENSLBEG00000012213	pum3	100	81.307	ENSMAMG00000022861	pum3	100	81.307	Mastacembelus_armatus
ENSLBEG00000012213	pum3	100	79.211	ENSMZEG00005014205	pum3	97	78.756	Maylandia_zebra
ENSLBEG00000012213	pum3	81	55.367	ENSMGAG00000002255	PUM3	96	51.241	Meleagris_gallopavo
ENSLBEG00000012213	pum3	99	53.614	ENSMAUG00000009733	Pum3	99	53.593	Mesocricetus_auratus
ENSLBEG00000012213	pum3	99	53.064	ENSMICG00000045916	PUM3	87	53.204	Microcebus_murinus
ENSLBEG00000012213	pum3	99	51.885	ENSMOCG00000014830	-	99	51.885	Microtus_ochrogaster
ENSLBEG00000012213	pum3	99	54.111	ENSMOCG00000019519	-	96	56.109	Microtus_ochrogaster
ENSLBEG00000012213	pum3	96	73.659	ENSMMOG00000012184	pum3	96	73.409	Mola_mola
ENSLBEG00000012213	pum3	99	50.000	ENSMODG00000015417	PUM3	76	58.770	Monodelphis_domestica
ENSLBEG00000012213	pum3	100	82.067	ENSMALG00000022164	pum3	92	82.827	Monopterus_albus
ENSLBEG00000012213	pum3	99	53.513	MGP_CAROLIEiJ_G0022845	Pum3	99	53.651	Mus_caroli
ENSLBEG00000012213	pum3	99	53.064	ENSMUSG00000041360	Pum3	99	53.204	Mus_musculus
ENSLBEG00000012213	pum3	99	53.812	MGP_PahariEiJ_G0014338	Pum3	99	53.800	Mus_pahari
ENSLBEG00000012213	pum3	99	53.214	MGP_SPRETEiJ_G0023763	Pum3	99	53.353	Mus_spretus
ENSLBEG00000012213	pum3	90	56.951	ENSMPUG00000005125	PUM3	99	53.373	Mustela_putorius_furo
ENSLBEG00000012213	pum3	99	53.293	ENSMLUG00000002309	PUM3	92	57.358	Myotis_lucifugus
ENSLBEG00000012213	pum3	99	51.824	ENSNGAG00000019468	Pum3	99	52.036	Nannospalax_galili
ENSLBEG00000012213	pum3	97	73.155	ENSNBRG00000021370	pum3	92	73.453	Neolamprologus_brichardi
ENSLBEG00000012213	pum3	99	54.410	ENSNLEG00000008712	PUM3	99	54.341	Nomascus_leucogenys
ENSLBEG00000012213	pum3	75	43.648	ENSMEUG00000013606	-	97	43.611	Notamacropus_eugenii
ENSLBEG00000012213	pum3	63	47.867	ENSOPRG00000004225	-	64	48.578	Ochotona_princeps
ENSLBEG00000012213	pum3	93	51.577	ENSODEG00000016477	-	97	51.577	Octodon_degus
ENSLBEG00000012213	pum3	94	55.210	ENSODEG00000003625	-	97	56.260	Octodon_degus
ENSLBEG00000012213	pum3	100	80.303	ENSONIG00000012733	pum3	100	79.848	Oreochromis_niloticus
ENSLBEG00000012213	pum3	80	58.206	ENSOANG00000014995	PUM3	98	58.131	Ornithorhynchus_anatinus
ENSLBEG00000012213	pum3	99	53.927	ENSOCUG00000004189	-	99	53.474	Oryctolagus_cuniculus
ENSLBEG00000012213	pum3	99	52.576	ENSOCUG00000026104	-	92	56.187	Oryctolagus_cuniculus
ENSLBEG00000012213	pum3	100	70.840	ENSORLG00000014935	pum3	100	70.534	Oryzias_latipes
ENSLBEG00000012213	pum3	100	70.382	ENSORLG00020002841	pum3	100	70.076	Oryzias_latipes_hni
ENSLBEG00000012213	pum3	100	70.840	ENSORLG00015015906	pum3	100	70.382	Oryzias_latipes_hsok
ENSLBEG00000012213	pum3	100	71.450	ENSOMEG00000009427	pum3	100	71.145	Oryzias_melastigma
ENSLBEG00000012213	pum3	99	40.729	ENSOGAG00000033481	-	99	40.639	Otolemur_garnettii
ENSLBEG00000012213	pum3	99	53.927	ENSOGAG00000008125	-	99	53.513	Otolemur_garnettii
ENSLBEG00000012213	pum3	93	55.981	ENSOARG00000013337	PUM3	99	53.881	Ovis_aries
ENSLBEG00000012213	pum3	99	54.030	ENSPPAG00000041337	PUM3	99	53.961	Pan_paniscus
ENSLBEG00000012213	pum3	99	53.593	ENSPPRG00000000809	PUM3	92	57.454	Panthera_pardus
ENSLBEG00000012213	pum3	99	54.042	ENSPTIG00000021934	PUM3	92	57.956	Panthera_tigris_altaica
ENSLBEG00000012213	pum3	99	54.179	ENSPTRG00000020735	PUM3	99	54.111	Pan_troglodytes
ENSLBEG00000012213	pum3	99	54.260	ENSPANG00000025118	PUM3	99	54.192	Papio_anubis
ENSLBEG00000012213	pum3	100	61.934	ENSPKIG00000022249	pum3	95	61.526	Paramormyrops_kingsleyae
ENSLBEG00000012213	pum3	99	55.690	ENSPSIG00000016272	PUM3	99	54.286	Pelodiscus_sinensis
ENSLBEG00000012213	pum3	75	75.709	ENSPMGG00000021261	pum3	99	75.709	Periophthalmus_magnuspinnatus
ENSLBEG00000012213	pum3	99	43.881	ENSPEMG00000019340	-	99	43.750	Peromyscus_maniculatus_bairdii
ENSLBEG00000012213	pum3	97	55.346	ENSPCIG00000030598	PUM3	79	56.784	Phascolarctos_cinereus
ENSLBEG00000012213	pum3	100	67.378	ENSPFOG00000001719	pum3	100	66.921	Poecilia_formosa
ENSLBEG00000012213	pum3	100	70.732	ENSPLAG00000020010	pum3	100	69.665	Poecilia_latipinna
ENSLBEG00000012213	pum3	100	70.122	ENSPMEG00000017451	pum3	100	69.665	Poecilia_mexicana
ENSLBEG00000012213	pum3	71	62.500	ENSPREG00000019478	-	74	59.857	Poecilia_reticulata
ENSLBEG00000012213	pum3	99	54.260	ENSPPYG00000019255	PUM3	89	58.793	Pongo_abelii
ENSLBEG00000012213	pum3	95	48.899	ENSPCAG00000005797	PUM3	89	50.329	Procavia_capensis
ENSLBEG00000012213	pum3	99	53.474	ENSPCOG00000027325	PUM3	99	53.323	Propithecus_coquereli
ENSLBEG00000012213	pum3	99	53.731	ENSPVAG00000016135	PUM3	95	53.293	Pteropus_vampyrus
ENSLBEG00000012213	pum3	100	79.604	ENSPNYG00000016124	pum3	100	79.148	Pundamilia_nyererei
ENSLBEG00000012213	pum3	99	59.398	ENSPNAG00000026524	pum3	99	61.221	Pygocentrus_nattereri
ENSLBEG00000012213	pum3	96	54.588	ENSRNOG00000012574	Pum3	96	55.751	Rattus_norvegicus
ENSLBEG00000012213	pum3	96	54.277	ENSRNOG00000048356	RGD1308750	96	55.431	Rattus_norvegicus
ENSLBEG00000012213	pum3	99	53.513	ENSRBIG00000036924	PUM3	99	53.662	Rhinopithecus_bieti
ENSLBEG00000012213	pum3	99	53.662	ENSRROG00000041089	PUM3	99	53.812	Rhinopithecus_roxellana
ENSLBEG00000012213	pum3	99	53.961	ENSSBOG00000028066	PUM3	99	53.743	Saimiri_boliviensis_boliviensis
ENSLBEG00000012213	pum3	99	53.812	ENSSHAG00000003730	PUM3	99	53.443	Sarcophilus_harrisii
ENSLBEG00000012213	pum3	99	62.064	ENSSFOG00015018778	pum3	99	61.002	Scleropages_formosus
ENSLBEG00000012213	pum3	100	80.425	ENSSMAG00000013236	pum3	99	81.032	Scophthalmus_maximus
ENSLBEG00000012213	pum3	100	84.281	ENSSDUG00000001887	pum3	99	84.581	Seriola_dumerili
ENSLBEG00000012213	pum3	100	85.455	ENSSLDG00000015766	pum3	99	85.455	Seriola_lalandi_dorsalis
ENSLBEG00000012213	pum3	91	53.289	ENSSARG00000000579	PUM3	98	53.377	Sorex_araneus
ENSLBEG00000012213	pum3	94	56.169	ENSSPUG00000001707	PUM3	99	54.490	Sphenodon_punctatus
ENSLBEG00000012213	pum3	100	81.155	ENSSPAG00000003976	pum3	100	80.851	Stegastes_partitus
ENSLBEG00000012213	pum3	90	57.191	ENSSSCG00000005227	PUM3	99	53.743	Sus_scrofa
ENSLBEG00000012213	pum3	96	55.140	ENSTGUG00000005339	PUM3	99	55.416	Taeniopygia_guttata
ENSLBEG00000012213	pum3	100	78.571	ENSTRUG00000004074	pum3	99	78.571	Takifugu_rubripes
ENSLBEG00000012213	pum3	99	74.198	ENSTNIG00000010325	pum3	98	73.628	Tetraodon_nigroviridis
ENSLBEG00000012213	pum3	80	44.762	ENSTBEG00000013058	PUM3	82	44.776	Tupaia_belangeri
ENSLBEG00000012213	pum3	90	51.505	ENSTTRG00000001062	PUM3	88	51.839	Tursiops_truncatus
ENSLBEG00000012213	pum3	93	49.840	ENSUMAG00000018443	PUM3	99	56.604	Ursus_maritimus
ENSLBEG00000012213	pum3	99	53.812	ENSVPAG00000010766	PUM3	99	54.123	Vicugna_pacos
ENSLBEG00000012213	pum3	94	54.936	ENSVVUG00000006527	PUM3	99	53.523	Vulpes_vulpes
ENSLBEG00000012213	pum3	95	45.353	ENSXETG00000011707	pum3	91	46.952	Xenopus_tropicalis
ENSLBEG00000012213	pum3	94	67.638	ENSXCOG00000006725	pum3	98	67.488	Xiphophorus_couchianus
ENSLBEG00000012213	pum3	100	69.207	ENSXMAG00000002926	pum3	100	68.750	Xiphophorus_maculatus