EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000012252 (Gene tree)
Gene ID: 109990141
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 8932 bases
Position: chrFKLU01000177.1:631171-640102
Accession: 109990141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015810	THUMP	PF02926.17	4e-10	1	1
ENSLBEP00000015810	UPF0020	PF01170.18	4.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000016742	-	2567	XM_020642147	ENSLBEP00000015810	493 (aa)	XP_020497803	UPI0009B39199

Gene Model

Click here to download ENSLBEG00000012252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012252	thumpd3	92	57.620	ENSG00000134077	THUMPD3	91	59.355	Homo_sapiens
ENSLBEG00000012252	thumpd3	97	85.655	ENSAPOG00000015836	thumpd3	99	85.655	Acanthochromis_polyacanthus
ENSLBEG00000012252	thumpd3	88	60.480	ENSAMEG00000011321	THUMPD3	90	60.699	Ailuropoda_melanoleuca
ENSLBEG00000012252	thumpd3	100	85.282	ENSACIG00000020096	thumpd3	100	85.282	Amphilophus_citrinellus
ENSLBEG00000012252	thumpd3	99	84.242	ENSAOCG00000004399	thumpd3	99	84.242	Amphiprion_ocellaris
ENSLBEG00000012252	thumpd3	99	84.848	ENSAPEG00000016740	thumpd3	99	84.848	Amphiprion_percula
ENSLBEG00000012252	thumpd3	99	83.232	ENSATEG00000005345	thumpd3	99	83.232	Anabas_testudineus
ENSLBEG00000012252	thumpd3	76	62.500	ENSAPLG00000003598	THUMPD3	99	62.500	Anas_platyrhynchos
ENSLBEG00000012252	thumpd3	90	59.756	ENSACAG00000014974	THUMPD3	92	60.124	Anolis_carolinensis
ENSLBEG00000012252	thumpd3	92	57.620	ENSANAG00000002365	THUMPD3	92	59.785	Aotus_nancymaae
ENSLBEG00000012252	thumpd3	99	84.444	ENSACLG00000023333	thumpd3	99	84.444	Astatotilapia_calliptera
ENSLBEG00000012252	thumpd3	86	57.243	ENSACLG00000013504	-	89	57.243	Astatotilapia_calliptera
ENSLBEG00000012252	thumpd3	93	72.009	ENSAMXG00000015683	thumpd3	98	72.009	Astyanax_mexicanus
ENSLBEG00000012252	thumpd3	89	60.521	ENSBTAG00000003112	THUMPD3	91	61.290	Bos_taurus
ENSLBEG00000012252	thumpd3	85	35.867	WBGene00010846	M04B2.2	96	35.629	Caenorhabditis_elegans
ENSLBEG00000012252	thumpd3	92	56.576	ENSCJAG00000015949	THUMPD3	92	58.511	Callithrix_jacchus
ENSLBEG00000012252	thumpd3	88	59.868	ENSCAFG00000005499	THUMPD3	90	60.746	Canis_familiaris
ENSLBEG00000012252	thumpd3	73	57.702	ENSCAFG00000008060	-	93	58.701	Canis_familiaris
ENSLBEG00000012252	thumpd3	78	58.824	ENSCAFG00020025887	-	94	59.804	Canis_lupus_dingo
ENSLBEG00000012252	thumpd3	88	59.868	ENSCAFG00020008895	-	90	60.746	Canis_lupus_dingo
ENSLBEG00000012252	thumpd3	88	60.659	ENSCHIG00000024037	THUMPD3	90	61.319	Capra_hircus
ENSLBEG00000012252	thumpd3	90	57.634	ENSTSYG00000000159	THUMPD3	92	58.974	Carlito_syrichta
ENSLBEG00000012252	thumpd3	84	42.155	ENSCAPG00000017486	THUMPD3	84	41.289	Cavia_aperea
ENSLBEG00000012252	thumpd3	95	58.282	ENSCPOG00000033287	THUMPD3	95	59.221	Cavia_porcellus
ENSLBEG00000012252	thumpd3	92	51.566	ENSCCAG00000021429	-	94	53.111	Cebus_capucinus
ENSLBEG00000012252	thumpd3	91	58.298	ENSCCAG00000027067	-	92	59.785	Cebus_capucinus
ENSLBEG00000012252	thumpd3	92	58.038	ENSCATG00000040999	THUMPD3	93	59.362	Cercocebus_atys
ENSLBEG00000012252	thumpd3	93	58.714	ENSCLAG00000000690	THUMPD3	91	61.304	Chinchilla_lanigera
ENSLBEG00000012252	thumpd3	92	58.038	ENSCSAG00000010753	THUMPD3	93	59.362	Chlorocebus_sabaeus
ENSLBEG00000012252	thumpd3	77	50.196	ENSCHOG00000012851	THUMPD3	76	50.588	Choloepus_hoffmanni
ENSLBEG00000012252	thumpd3	94	58.600	ENSCPBG00000014771	THUMPD3	91	61.159	Chrysemys_picta_bellii
ENSLBEG00000012252	thumpd3	88	42.334	ENSCSAVG00000008668	-	97	40.826	Ciona_savignyi
ENSLBEG00000012252	thumpd3	92	57.829	ENSCANG00000031901	THUMPD3	93	59.149	Colobus_angolensis_palliatus
ENSLBEG00000012252	thumpd3	88	60.440	ENSCGRG00001024117	Thumpd3	90	61.538	Cricetulus_griseus_chok1gshd
ENSLBEG00000012252	thumpd3	88	60.440	ENSCGRG00000018116	Thumpd3	90	61.538	Cricetulus_griseus_crigri
ENSLBEG00000012252	thumpd3	93	80.430	ENSCSEG00000002546	thumpd3	99	77.688	Cynoglossus_semilaevis
ENSLBEG00000012252	thumpd3	99	80.000	ENSCVAG00000001019	thumpd3	98	80.000	Cyprinodon_variegatus
ENSLBEG00000012252	thumpd3	92	67.304	ENSDARG00000059634	thumpd3	97	67.304	Danio_rerio
ENSLBEG00000012252	thumpd3	94	57.260	ENSDNOG00000047668	THUMPD3	94	57.873	Dasypus_novemcinctus
ENSLBEG00000012252	thumpd3	87	60.526	ENSDORG00000003257	Thumpd3	90	61.148	Dipodomys_ordii
ENSLBEG00000012252	thumpd3	58	54.426	ENSETEG00000020239	-	60	55.738	Echinops_telfairi
ENSLBEG00000012252	thumpd3	87	52.009	ENSEBUG00000004221	thumpd3	99	51.786	Eptatretus_burgeri
ENSLBEG00000012252	thumpd3	87	59.513	ENSEASG00005013327	THUMPD3	90	59.956	Equus_asinus_asinus
ENSLBEG00000012252	thumpd3	87	61.726	ENSECAG00000002016	THUMPD3	90	62.168	Equus_caballus
ENSLBEG00000012252	thumpd3	89	54.113	ENSEEUG00000014696	THUMPD3	91	55.120	Erinaceus_europaeus
ENSLBEG00000012252	thumpd3	89	88.043	ENSELUG00000018246	thumpd3	68	88.043	Esox_lucius
ENSLBEG00000012252	thumpd3	88	59.341	ENSFCAG00000006171	THUMPD3	90	60.220	Felis_catus
ENSLBEG00000012252	thumpd3	83	56.306	ENSFALG00000013631	THUMPD3	91	55.654	Ficedula_albicollis
ENSLBEG00000012252	thumpd3	88	59.780	ENSFDAG00000014825	THUMPD3	90	60.440	Fukomys_damarensis
ENSLBEG00000012252	thumpd3	99	80.561	ENSFHEG00000006006	thumpd3	99	80.561	Fundulus_heteroclitus
ENSLBEG00000012252	thumpd3	91	72.113	ENSGMOG00000007923	thumpd3	93	72.767	Gadus_morhua
ENSLBEG00000012252	thumpd3	87	58.710	ENSGALG00000044813	THUMPD3	94	59.570	Gallus_gallus
ENSLBEG00000012252	thumpd3	99	81.526	ENSGAFG00000021645	thumpd3	99	81.526	Gambusia_affinis
ENSLBEG00000012252	thumpd3	51	31.179	ENSGAFG00000012683	thumpd2	52	30.769	Gambusia_affinis
ENSLBEG00000012252	thumpd3	99	79.837	ENSGACG00000000930	thumpd3	99	81.935	Gasterosteus_aculeatus
ENSLBEG00000012252	thumpd3	87	60.823	ENSGAGG00000022750	THUMPD3	91	61.255	Gopherus_agassizii
ENSLBEG00000012252	thumpd3	92	57.411	ENSGGOG00000000604	THUMPD3	91	57.660	Gorilla_gorilla
ENSLBEG00000012252	thumpd3	99	84.646	ENSHBUG00000013405	thumpd3	99	84.646	Haplochromis_burtoni
ENSLBEG00000012252	thumpd3	95	57.260	ENSHGLG00000016200	THUMPD3	92	59.188	Heterocephalus_glaber_female
ENSLBEG00000012252	thumpd3	95	57.260	ENSHGLG00100017321	-	92	59.062	Heterocephalus_glaber_male
ENSLBEG00000012252	thumpd3	91	51.599	ENSHGLG00100000505	-	92	53.691	Heterocephalus_glaber_male
ENSLBEG00000012252	thumpd3	94	79.274	ENSHCOG00000004871	thumpd3	98	79.274	Hippocampus_comes
ENSLBEG00000012252	thumpd3	90	71.145	ENSIPUG00000019415	THUMPD3	92	71.145	Ictalurus_punctatus
ENSLBEG00000012252	thumpd3	88	60.927	ENSSTOG00000003973	THUMPD3	90	60.573	Ictidomys_tridecemlineatus
ENSLBEG00000012252	thumpd3	92	53.602	ENSJJAG00000017751	Thumpd3	94	53.542	Jaculus_jaculus
ENSLBEG00000012252	thumpd3	99	80.041	ENSKMAG00000021025	thumpd3	94	80.041	Kryptolebias_marmoratus
ENSLBEG00000012252	thumpd3	90	60.381	ENSLACG00000018604	THUMPD3	92	59.362	Latimeria_chalumnae
ENSLBEG00000012252	thumpd3	88	66.167	ENSLOCG00000009800	thumpd3	95	65.880	Lepisosteus_oculatus
ENSLBEG00000012252	thumpd3	90	59.829	ENSLAFG00000005103	THUMPD3	93	60.684	Loxodonta_africana
ENSLBEG00000012252	thumpd3	91	58.439	ENSMFAG00000044884	THUMPD3	92	59.785	Macaca_fascicularis
ENSLBEG00000012252	thumpd3	91	58.439	ENSMMUG00000017307	THUMPD3	92	59.785	Macaca_mulatta
ENSLBEG00000012252	thumpd3	91	58.439	ENSMNEG00000030529	THUMPD3	92	59.785	Macaca_nemestrina
ENSLBEG00000012252	thumpd3	92	57.829	ENSMLEG00000032943	THUMPD3	93	59.149	Mandrillus_leucophaeus
ENSLBEG00000012252	thumpd3	94	82.974	ENSMAMG00000023934	thumpd3	99	79.798	Mastacembelus_armatus
ENSLBEG00000012252	thumpd3	99	84.444	ENSMZEG00005010623	thumpd3	99	84.444	Maylandia_zebra
ENSLBEG00000012252	thumpd3	77	59.559	ENSMGAG00000010182	THUMPD3	100	60.049	Meleagris_gallopavo
ENSLBEG00000012252	thumpd3	88	60.613	ENSMAUG00000012250	Thumpd3	90	60.965	Mesocricetus_auratus
ENSLBEG00000012252	thumpd3	94	54.890	ENSMICG00000010095	THUMPD3	91	57.143	Microcebus_murinus
ENSLBEG00000012252	thumpd3	90	59.188	ENSMOCG00000020148	Thumpd3	92	59.615	Microtus_ochrogaster
ENSLBEG00000012252	thumpd3	99	81.174	ENSMMOG00000021791	thumpd3	99	84.009	Mola_mola
ENSLBEG00000012252	thumpd3	90	57.233	ENSMODG00000004715	-	93	58.058	Monodelphis_domestica
ENSLBEG00000012252	thumpd3	95	84.009	ENSMALG00000017316	thumpd3	99	84.009	Monopterus_albus
ENSLBEG00000012252	thumpd3	53	52.500	MGP_CAROLIEiJ_G0028714	-	58	53.571	Mus_caroli
ENSLBEG00000012252	thumpd3	90	58.849	ENSMUSG00000030264	Thumpd3	92	59.275	Mus_musculus
ENSLBEG00000012252	thumpd3	90	59.062	MGP_PahariEiJ_G0022465	Thumpd3	93	59.488	Mus_pahari
ENSLBEG00000012252	thumpd3	90	59.062	MGP_SPRETEiJ_G0029742	Thumpd3	92	59.488	Mus_spretus
ENSLBEG00000012252	thumpd3	88	54.967	ENSMPUG00000005219	-	90	54.945	Mustela_putorius_furo
ENSLBEG00000012252	thumpd3	88	60.526	ENSMPUG00000017066	-	90	60.699	Mustela_putorius_furo
ENSLBEG00000012252	thumpd3	90	57.537	ENSMLUG00000008538	THUMPD3	92	58.174	Myotis_lucifugus
ENSLBEG00000012252	thumpd3	95	57.724	ENSNGAG00000021014	-	90	60.526	Nannospalax_galili
ENSLBEG00000012252	thumpd3	95	48.428	ENSNGAG00000001549	-	91	49.667	Nannospalax_galili
ENSLBEG00000012252	thumpd3	99	84.242	ENSNBRG00000004886	thumpd3	99	84.242	Neolamprologus_brichardi
ENSLBEG00000012252	thumpd3	92	57.620	ENSNLEG00000003863	THUMPD3	93	58.936	Nomascus_leucogenys
ENSLBEG00000012252	thumpd3	78	58.293	ENSMEUG00000009819	THUMPD3	96	59.611	Notamacropus_eugenii
ENSLBEG00000012252	thumpd3	79	60.097	ENSOPRG00000002020	THUMPD3	98	59.564	Ochotona_princeps
ENSLBEG00000012252	thumpd3	68	57.022	ENSODEG00000018242	THUMPD3	100	57.584	Octodon_degus
ENSLBEG00000012252	thumpd3	99	84.848	ENSONIG00000018977	thumpd3	99	84.848	Oreochromis_niloticus
ENSLBEG00000012252	thumpd3	79	56.867	ENSOANG00000014481	THUMPD3	97	57.971	Ornithorhynchus_anatinus
ENSLBEG00000012252	thumpd3	90	61.028	ENSOCUG00000010921	THUMPD3	92	61.194	Oryctolagus_cuniculus
ENSLBEG00000012252	thumpd3	97	81.971	ENSORLG00000000676	thumpd3	94	84.176	Oryzias_latipes
ENSLBEG00000012252	thumpd3	97	82.390	ENSORLG00020007509	thumpd3	94	84.615	Oryzias_latipes_hni
ENSLBEG00000012252	thumpd3	97	82.180	ENSORLG00015003615	thumpd3	94	84.396	Oryzias_latipes_hsok
ENSLBEG00000012252	thumpd3	99	76.181	ENSOMEG00000014115	thumpd3	94	80.220	Oryzias_melastigma
ENSLBEG00000012252	thumpd3	78	57.108	ENSOGAG00000017111	THUMPD3	99	58.088	Otolemur_garnettii
ENSLBEG00000012252	thumpd3	88	60.659	ENSOARG00000007139	THUMPD3	88	61.438	Ovis_aries
ENSLBEG00000012252	thumpd3	92	57.620	ENSPPAG00000025852	THUMPD3	91	59.355	Pan_paniscus
ENSLBEG00000012252	thumpd3	88	59.780	ENSPPRG00000008071	THUMPD3	90	60.659	Panthera_pardus
ENSLBEG00000012252	thumpd3	88	59.780	ENSPTIG00000017923	THUMPD3	90	60.659	Panthera_tigris_altaica
ENSLBEG00000012252	thumpd3	92	57.411	ENSPTRG00000014585	THUMPD3	91	59.140	Pan_troglodytes
ENSLBEG00000012252	thumpd3	92	57.113	ENSPANG00000016253	THUMPD3	92	58.836	Papio_anubis
ENSLBEG00000012252	thumpd3	91	68.898	ENSPKIG00000014009	thumpd3	94	68.898	Paramormyrops_kingsleyae
ENSLBEG00000012252	thumpd3	87	59.170	ENSPSIG00000007370	THUMPD3	90	59.170	Pelodiscus_sinensis
ENSLBEG00000012252	thumpd3	95	78.632	ENSPMGG00000017563	thumpd3	95	80.132	Periophthalmus_magnuspinnatus
ENSLBEG00000012252	thumpd3	88	60.220	ENSPEMG00000022411	Thumpd3	90	60.262	Peromyscus_maniculatus_bairdii
ENSLBEG00000012252	thumpd3	88	52.539	ENSPMAG00000001291	thumpd3	100	52.759	Petromyzon_marinus
ENSLBEG00000012252	thumpd3	94	55.847	ENSPCIG00000002049	THUMPD3	90	58.635	Phascolarctos_cinereus
ENSLBEG00000012252	thumpd3	99	81.964	ENSPFOG00000002318	thumpd3	99	81.964	Poecilia_formosa
ENSLBEG00000012252	thumpd3	99	81.964	ENSPLAG00000014804	thumpd3	99	81.964	Poecilia_latipinna
ENSLBEG00000012252	thumpd3	99	81.964	ENSPMEG00000000582	thumpd3	99	81.964	Poecilia_mexicana
ENSLBEG00000012252	thumpd3	99	82.000	ENSPREG00000009176	thumpd3	99	82.000	Poecilia_reticulata
ENSLBEG00000012252	thumpd3	92	57.411	ENSPPYG00000029461	THUMPD3	92	59.140	Pongo_abelii
ENSLBEG00000012252	thumpd3	86	46.136	ENSPPYG00000017616	-	89	46.330	Pongo_abelii
ENSLBEG00000012252	thumpd3	81	58.711	ENSPCAG00000015398	THUMPD3	99	59.905	Procavia_capensis
ENSLBEG00000012252	thumpd3	91	49.789	ENSPCOG00000018095	-	94	51.674	Propithecus_coquereli
ENSLBEG00000012252	thumpd3	81	52.830	ENSPCOG00000023618	-	94	54.348	Propithecus_coquereli
ENSLBEG00000012252	thumpd3	89	59.307	ENSPVAG00000008721	THUMPD3	90	59.341	Pteropus_vampyrus
ENSLBEG00000012252	thumpd3	99	84.444	ENSPNYG00000006918	thumpd3	99	84.444	Pundamilia_nyererei
ENSLBEG00000012252	thumpd3	92	71.930	ENSPNAG00000014936	thumpd3	95	71.930	Pygocentrus_nattereri
ENSLBEG00000012252	thumpd3	88	60.526	ENSRNOG00000006941	Thumpd3	90	61.404	Rattus_norvegicus
ENSLBEG00000012252	thumpd3	93	58.125	ENSRBIG00000035954	THUMPD3	93	59.448	Rhinopithecus_bieti
ENSLBEG00000012252	thumpd3	93	57.917	ENSRROG00000035734	THUMPD3	93	59.236	Rhinopithecus_roxellana
ENSLBEG00000012252	thumpd3	92	57.531	ENSSBOG00000023567	THUMPD3	94	59.956	Saimiri_boliviensis_boliviensis
ENSLBEG00000012252	thumpd3	96	56.287	ENSSHAG00000014467	THUMPD3	93	58.996	Sarcophilus_harrisii
ENSLBEG00000012252	thumpd3	93	69.807	ENSSFOG00015019210	thumpd3	95	69.807	Scleropages_formosus
ENSLBEG00000012252	thumpd3	99	82.056	ENSSMAG00000000609	thumpd3	97	84.698	Scophthalmus_maximus
ENSLBEG00000012252	thumpd3	99	84.444	ENSSDUG00000012179	thumpd3	99	86.412	Seriola_dumerili
ENSLBEG00000012252	thumpd3	99	84.040	ENSSLDG00000022028	thumpd3	99	84.040	Seriola_lalandi_dorsalis
ENSLBEG00000012252	thumpd3	74	68.831	ENSSARG00000002239	THUMPD3	77	68.831	Sorex_araneus
ENSLBEG00000012252	thumpd3	88	59.488	ENSSPUG00000017461	THUMPD3	92	59.488	Sphenodon_punctatus
ENSLBEG00000012252	thumpd3	51	30.952	ENSSPUG00000006316	THUMPD2	56	30.952	Sphenodon_punctatus
ENSLBEG00000012252	thumpd3	99	84.008	ENSSPAG00000008345	thumpd3	98	84.008	Stegastes_partitus
ENSLBEG00000012252	thumpd3	88	60.965	ENSSSCG00000011542	THUMPD3	90	61.404	Sus_scrofa
ENSLBEG00000012252	thumpd3	86	59.513	ENSTGUG00000010440	THUMPD3	100	59.560	Taeniopygia_guttata
ENSLBEG00000012252	thumpd3	97	72.117	ENSTRUG00000004420	thumpd3	98	73.060	Takifugu_rubripes
ENSLBEG00000012252	thumpd3	93	81.046	ENSTNIG00000014627	thumpd3	99	81.046	Tetraodon_nigroviridis
ENSLBEG00000012252	thumpd3	94	53.799	ENSTBEG00000003450	THUMPD3	93	55.672	Tupaia_belangeri
ENSLBEG00000012252	thumpd3	89	60.000	ENSTTRG00000009694	THUMPD3	90	61.184	Tursiops_truncatus
ENSLBEG00000012252	thumpd3	88	60.699	ENSUAMG00000009412	THUMPD3	90	61.304	Ursus_americanus
ENSLBEG00000012252	thumpd3	89	63.122	ENSUMAG00000019241	THUMPD3	90	63.616	Ursus_maritimus
ENSLBEG00000012252	thumpd3	73	57.812	ENSVPAG00000002855	THUMPD3	91	58.333	Vicugna_pacos
ENSLBEG00000012252	thumpd3	88	59.868	ENSVVUG00000025278	THUMPD3	90	60.965	Vulpes_vulpes
ENSLBEG00000012252	thumpd3	90	59.871	ENSXETG00000001447	thumpd3	91	59.871	Xenopus_tropicalis
ENSLBEG00000012252	thumpd3	99	80.924	ENSXCOG00000000159	thumpd3	99	82.415	Xiphophorus_couchianus
ENSLBEG00000012252	thumpd3	99	80.762	ENSXMAG00000001423	thumpd3	99	80.762	Xiphophorus_maculatus