EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000012254 (Gene tree)
Gene ID: 109993619
Gene Symbol: ddx39b
Alias: bat1|zgc:63773
Full Name: spliceosome RNA helicase DDX39B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9796 bases
Position: chrFKLU01000264.1:127438-137233
Accession: 109993619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000015827	ResIII	PF04851.15	1.9e-08	1	1
ENSLBEP00000015818	ResIII	PF04851.15	2e-08	1	1
ENSLBEP00000015827	DEAD	PF00270.29	1.1e-36	1	1
ENSLBEP00000015818	DEAD	PF00270.29	1.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000016750	-	1308	-	ENSLBEP00000015818	435 (aa)	-	-
ENSLBET00000016760	-	2189	XM_020646615	ENSLBEP00000015827	429 (aa)	XP_020502271	UPI0009B34C62

Gene Model

Click here to download ENSLBEG00000012254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000012254	ddx39b	90	35.065	ENSLBEG00000001740	ddx61	85	35.492
ENSLBEG00000012254	ddx39b	90	32.300	ENSLBEG00000017823	ddx6	78	32.732
ENSLBEG00000012254	ddx39b	82	35.127	ENSLBEG00000020356	eif4a3	93	35.127
ENSLBEG00000012254	ddx39b	87	31.842	ENSLBEG00000027804	ddx49	77	31.842
ENSLBEG00000012254	ddx39b	75	30.117	ENSLBEG00000022905	ddx5	56	30.117
ENSLBEG00000012254	ddx39b	92	35.606	ENSLBEG00000008635	eif4a2	93	35.659
ENSLBEG00000012254	ddx39b	99	74.588	ENSLBEG00000025618	-	99	74.704
ENSLBEG00000012254	ddx39b	77	30.294	ENSLBEG00000022261	ddx59	58	30.294
ENSLBEG00000012254	ddx39b	99	72.770	ENSLBEG00000002817	DDX39A	94	73.050
ENSLBEG00000012254	ddx39b	98	30.806	ENSLBEG00000028348	ddx47	85	30.310
ENSLBEG00000012254	ddx39b	87	30.446	ENSLBEG00000022589	ddx27	52	30.446
ENSLBEG00000012254	ddx39b	91	33.504	ENSLBEG00000018971	eif4a1b	95	33.592
ENSLBEG00000012254	ddx39b	75	30.117	ENSLBEG00000010767	DDX5	52	30.117
ENSLBEG00000012254	ddx39b	86	30.343	ENSLBEG00000000341	ddx19	83	30.423
ENSLBEG00000012254	ddx39b	66	97.527	ENSLBEG00000017177	-	85	94.286
ENSLBEG00000012254	ddx39b	90	34.545	ENSLBEG00000016890	-	77	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012254	ddx39b	99	78.220	ENSG00000198563	DDX39B	96	83.799	Homo_sapiens
ENSLBEG00000012254	ddx39b	99	78.487	ENSAMEG00000009508	DDX39B	99	78.487	Ailuropoda_melanoleuca
ENSLBEG00000012254	ddx39b	99	81.776	ENSACIG00000004534	ddx39b	99	81.776	Amphilophus_citrinellus
ENSLBEG00000012254	ddx39b	99	81.030	ENSATEG00000012366	ddx39b	99	81.030	Anabas_testudineus
ENSLBEG00000012254	ddx39b	99	78.066	ENSACAG00000012240	DDX39B	99	78.066	Anolis_carolinensis
ENSLBEG00000012254	ddx39b	99	78.220	ENSANAG00000030372	DDX39B	99	78.251	Aotus_nancymaae
ENSLBEG00000012254	ddx39b	99	80.278	ENSACLG00000018759	ddx39b	99	80.278	Astatotilapia_calliptera
ENSLBEG00000012254	ddx39b	99	78.654	ENSAMXG00000017837	ddx39b	99	77.494	Astyanax_mexicanus
ENSLBEG00000012254	ddx39b	99	78.220	ENSBTAG00000014490	DDX39B	99	78.251	Bos_taurus
ENSLBEG00000012254	ddx39b	99	78.220	ENSCJAG00000003152	DDX39B	99	78.251	Callithrix_jacchus
ENSLBEG00000012254	ddx39b	99	78.487	ENSCAFG00000000509	DDX39B	98	79.672	Canis_familiaris
ENSLBEG00000012254	ddx39b	99	78.487	ENSCAFG00020020530	DDX39B	99	78.487	Canis_lupus_dingo
ENSLBEG00000012254	ddx39b	99	78.220	ENSCHIG00000004579	DDX39B	99	78.251	Capra_hircus
ENSLBEG00000012254	ddx39b	99	70.258	ENSTSYG00000029741	-	93	68.571	Carlito_syrichta
ENSLBEG00000012254	ddx39b	99	78.220	ENSTSYG00000010226	-	99	78.251	Carlito_syrichta
ENSLBEG00000012254	ddx39b	99	78.220	ENSCAPG00000010066	DDX39B	99	78.251	Cavia_aperea
ENSLBEG00000012254	ddx39b	99	78.220	ENSCPOG00000002335	DDX39B	99	78.251	Cavia_porcellus
ENSLBEG00000012254	ddx39b	99	78.220	ENSCCAG00000027897	DDX39B	99	78.251	Cebus_capucinus
ENSLBEG00000012254	ddx39b	99	70.327	ENSCATG00000043709	DDX39B	99	70.353	Cercocebus_atys
ENSLBEG00000012254	ddx39b	99	78.220	ENSCLAG00000014555	DDX39B	99	78.251	Chinchilla_lanigera
ENSLBEG00000012254	ddx39b	99	78.037	ENSCSAG00000008517	DDX39B	100	78.118	Chlorocebus_sabaeus
ENSLBEG00000012254	ddx39b	62	79.851	ENSCPBG00000014671	-	98	79.851	Chrysemys_picta_bellii
ENSLBEG00000012254	ddx39b	99	78.220	ENSCANG00000041217	DDX39B	99	78.251	Colobus_angolensis_palliatus
ENSLBEG00000012254	ddx39b	82	69.801	ENSCGRG00001021916	-	88	69.972	Cricetulus_griseus_chok1gshd
ENSLBEG00000012254	ddx39b	57	73.896	ENSCGRG00001017315	-	95	74.272	Cricetulus_griseus_chok1gshd
ENSLBEG00000012254	ddx39b	57	73.896	ENSCGRG00000012479	-	78	72.800	Cricetulus_griseus_crigri
ENSLBEG00000012254	ddx39b	99	77.907	ENSDARG00000036069	ddx39b	99	78.605	Danio_rerio
ENSLBEG00000012254	ddx39b	99	78.220	ENSDNOG00000010215	DDX39B	99	78.251	Dasypus_novemcinctus
ENSLBEG00000012254	ddx39b	87	78.342	ENSDORG00000004985	Ddx39b	100	78.342	Dipodomys_ordii
ENSLBEG00000012254	ddx39b	87	67.725	ENSETEG00000009649	DDX39B	87	67.914	Echinops_telfairi
ENSLBEG00000012254	ddx39b	99	78.220	ENSEASG00005017156	DDX39B	99	78.251	Equus_asinus_asinus
ENSLBEG00000012254	ddx39b	99	78.220	ENSECAG00000007750	DDX39B	99	78.251	Equus_caballus
ENSLBEG00000012254	ddx39b	99	79.529	ENSELUG00000017904	ddx39b	99	78.824	Esox_lucius
ENSLBEG00000012254	ddx39b	99	78.487	ENSFCAG00000004497	DDX39B	99	78.487	Felis_catus
ENSLBEG00000012254	ddx39b	99	78.220	ENSFDAG00000011074	DDX39B	99	78.251	Fukomys_damarensis
ENSLBEG00000012254	ddx39b	72	80.064	ENSGAGG00000001300	-	79	80.064	Gopherus_agassizii
ENSLBEG00000012254	ddx39b	99	78.220	ENSGGOG00000005989	DDX39B	99	78.251	Gorilla_gorilla
ENSLBEG00000012254	ddx39b	99	78.014	ENSHGLG00000019248	DDX39B	99	78.014	Heterocephalus_glaber_female
ENSLBEG00000012254	ddx39b	99	78.014	ENSHGLG00100011850	DDX39B	99	78.014	Heterocephalus_glaber_male
ENSLBEG00000012254	ddx39b	99	78.190	ENSIPUG00000015733	DDX39B	93	77.726	Ictalurus_punctatus
ENSLBEG00000012254	ddx39b	99	78.220	ENSSTOG00000012838	DDX39B	99	78.251	Ictidomys_tridecemlineatus
ENSLBEG00000012254	ddx39b	99	77.778	ENSJJAG00000005660	-	99	77.778	Jaculus_jaculus
ENSLBEG00000012254	ddx39b	99	70.629	ENSLACG00000002110	DDX39B	99	70.629	Latimeria_chalumnae
ENSLBEG00000012254	ddx39b	99	77.986	ENSLAFG00000014202	DDX39B	99	78.199	Loxodonta_africana
ENSLBEG00000012254	ddx39b	99	78.220	ENSMFAG00000034233	DDX39B	99	78.251	Macaca_fascicularis
ENSLBEG00000012254	ddx39b	99	78.220	ENSMMUG00000008839	DDX39B	99	78.251	Macaca_mulatta
ENSLBEG00000012254	ddx39b	99	78.220	ENSMNEG00000041059	DDX39B	99	78.251	Macaca_nemestrina
ENSLBEG00000012254	ddx39b	99	78.220	ENSMLEG00000043791	DDX39B	99	78.251	Mandrillus_leucophaeus
ENSLBEG00000012254	ddx39b	99	80.510	ENSMZEG00005017654	ddx39b	99	80.510	Maylandia_zebra
ENSLBEG00000012254	ddx39b	99	77.986	ENSMAUG00000008059	Ddx39b	99	78.014	Mesocricetus_auratus
ENSLBEG00000012254	ddx39b	99	78.220	ENSMICG00000017349	DDX39B	99	78.251	Microcebus_murinus
ENSLBEG00000012254	ddx39b	99	77.986	ENSMOCG00000011169	Ddx39b	99	78.014	Microtus_ochrogaster
ENSLBEG00000012254	ddx39b	88	77.895	ENSMODG00000015791	DDX39B	88	77.926	Monodelphis_domestica
ENSLBEG00000012254	ddx39b	99	77.986	ENSMUSG00000019432	Ddx39b	100	79.730	Mus_musculus
ENSLBEG00000012254	ddx39b	99	77.986	MGP_PahariEiJ_G0020513	Ddx39b	100	79.730	Mus_pahari
ENSLBEG00000012254	ddx39b	99	77.986	MGP_SPRETEiJ_G0022424	Ddx39b	99	78.014	Mus_spretus
ENSLBEG00000012254	ddx39b	99	78.487	ENSMPUG00000011407	DDX39B	99	78.487	Mustela_putorius_furo
ENSLBEG00000012254	ddx39b	71	79.739	ENSMLUG00000001681	DDX39B	98	79.739	Myotis_lucifugus
ENSLBEG00000012254	ddx39b	99	78.220	ENSNGAG00000022948	Ddx39b	99	78.251	Nannospalax_galili
ENSLBEG00000012254	ddx39b	82	79.643	ENSNLEG00000006094	DDX39B	99	79.643	Nomascus_leucogenys
ENSLBEG00000012254	ddx39b	84	82.326	ENSMEUG00000008264	DDX39B	84	82.326	Notamacropus_eugenii
ENSLBEG00000012254	ddx39b	99	78.487	ENSOPRG00000011923	DDX39B	99	78.487	Ochotona_princeps
ENSLBEG00000012254	ddx39b	99	78.220	ENSODEG00000018083	DDX39B	99	78.014	Octodon_degus
ENSLBEG00000012254	ddx39b	99	80.796	ENSONIG00000004740	ddx39b	99	80.796	Oreochromis_niloticus
ENSLBEG00000012254	ddx39b	55	74.274	ENSOANG00000008361	DDX39B	95	74.262	Ornithorhynchus_anatinus
ENSLBEG00000012254	ddx39b	99	75.571	ENSOCUG00000024126	DDX39B	99	75.571	Oryctolagus_cuniculus
ENSLBEG00000012254	ddx39b	82	75.068	ENSOGAG00000009067	-	100	79.938	Otolemur_garnettii
ENSLBEG00000012254	ddx39b	99	78.066	ENSOGAG00000028850	-	99	78.066	Otolemur_garnettii
ENSLBEG00000012254	ddx39b	99	78.220	ENSOARG00000008787	DDX39B	97	78.251	Ovis_aries
ENSLBEG00000012254	ddx39b	99	78.220	ENSPPAG00000043072	DDX39B	99	78.251	Pan_paniscus
ENSLBEG00000012254	ddx39b	99	78.487	ENSPPRG00000001913	DDX39B	99	78.487	Panthera_pardus
ENSLBEG00000012254	ddx39b	99	78.014	ENSPTIG00000017669	DDX39B	99	78.014	Panthera_tigris_altaica
ENSLBEG00000012254	ddx39b	99	78.220	ENSPTRG00000032509	DDX39B	99	78.251	Pan_troglodytes
ENSLBEG00000012254	ddx39b	99	78.220	ENSPANG00000018609	DDX39B	99	78.251	Papio_anubis
ENSLBEG00000012254	ddx39b	99	77.083	ENSPKIG00000011324	ddx39b	99	77.315	Paramormyrops_kingsleyae
ENSLBEG00000012254	ddx39b	99	77.752	ENSPEMG00000016905	Ddx39b	99	77.778	Peromyscus_maniculatus_bairdii
ENSLBEG00000012254	ddx39b	99	78.220	ENSPCIG00000017572	DDX39B	99	78.251	Phascolarctos_cinereus
ENSLBEG00000012254	ddx39b	99	78.220	ENSPPYG00000016433	DDX39B	99	78.251	Pongo_abelii
ENSLBEG00000012254	ddx39b	65	79.570	ENSPCAG00000003484	DDX39B	98	79.570	Procavia_capensis
ENSLBEG00000012254	ddx39b	99	78.220	ENSPCOG00000018656	DDX39B	99	78.251	Propithecus_coquereli
ENSLBEG00000012254	ddx39b	99	78.220	ENSPVAG00000004653	DDX39B	99	78.251	Pteropus_vampyrus
ENSLBEG00000012254	ddx39b	98	73.821	ENSPNYG00000010382	ddx39b	99	73.598	Pundamilia_nyererei
ENSLBEG00000012254	ddx39b	99	78.654	ENSPNAG00000026926	ddx39b	99	77.262	Pygocentrus_nattereri
ENSLBEG00000012254	ddx39b	99	77.986	ENSRNOG00000000841	Ddx39b	99	78.014	Rattus_norvegicus
ENSLBEG00000012254	ddx39b	99	69.789	ENSRBIG00000031309	DDX39B	99	69.905	Rhinopithecus_bieti
ENSLBEG00000012254	ddx39b	99	78.220	ENSRROG00000039517	DDX39B	99	78.251	Rhinopithecus_roxellana
ENSLBEG00000012254	ddx39b	99	69.789	ENSSBOG00000035513	-	99	69.905	Saimiri_boliviensis_boliviensis
ENSLBEG00000012254	ddx39b	99	78.220	ENSSHAG00000003209	DDX39B	99	78.251	Sarcophilus_harrisii
ENSLBEG00000012254	ddx39b	99	77.546	ENSSFOG00015016107	ddx39b	99	77.778	Scleropages_formosus
ENSLBEG00000012254	ddx39b	99	81.967	ENSSDUG00000011557	ddx39b	99	81.967	Seriola_dumerili
ENSLBEG00000012254	ddx39b	99	81.265	ENSSLDG00000015763	ddx39b	99	81.265	Seriola_lalandi_dorsalis
ENSLBEG00000012254	ddx39b	87	68.717	ENSSARG00000005245	DDX39B	100	68.984	Sorex_araneus
ENSLBEG00000012254	ddx39b	99	78.220	ENSSPUG00000012805	DDX39B	99	78.014	Sphenodon_punctatus
ENSLBEG00000012254	ddx39b	99	78.220	ENSSSCG00000001400	DDX39B	99	81.232	Sus_scrofa
ENSLBEG00000012254	ddx39b	99	60.422	ENSTBEG00000003721	DDX39B	99	60.284	Tupaia_belangeri
ENSLBEG00000012254	ddx39b	99	71.759	ENSTTRG00000014074	DDX39B	99	71.729	Tursiops_truncatus
ENSLBEG00000012254	ddx39b	99	68.471	ENSUAMG00000027335	DDX39B	99	68.868	Ursus_americanus
ENSLBEG00000012254	ddx39b	99	71.158	ENSUMAG00000015124	DDX39B	99	71.327	Ursus_maritimus
ENSLBEG00000012254	ddx39b	61	73.504	ENSVPAG00000009167	-	73	73.451	Vicugna_pacos
ENSLBEG00000012254	ddx39b	99	78.487	ENSVVUG00000019518	DDX39B	98	78.487	Vulpes_vulpes
ENSLBEG00000012254	ddx39b	99	68.000	ENSXETG00000002498	ddx39b	99	68.000	Xenopus_tropicalis