EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000012484 (Gene tree)
Gene ID: 109992425
Gene Symbol: -
Alias: -
Full Name: protein SCAF8-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9678 bases
Position: chrFKLU01000231.1:3392-13069
Accession: 109992425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000016137	RRM_1	PF00076.22	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017075	-	4095	XM_020645020	ENSLBEP00000016137	1364 (aa)	XP_020500676	-

Gene Model

Click here to download ENSLBEG00000012484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012484	-	63	76.429	ENSG00000213079	SCAF8	62	76.296	Homo_sapiens
ENSLBEG00000012484	-	93	91.148	ENSAPOG00000015527	SCAF8	87	95.522	Acanthochromis_polyacanthus
ENSLBEG00000012484	-	59	77.500	ENSAMEG00000007583	SCAF8	59	77.407	Ailuropoda_melanoleuca
ENSLBEG00000012484	-	92	93.289	ENSAOCG00000002421	SCAF8	87	96.269	Amphiprion_ocellaris
ENSLBEG00000012484	-	93	93.960	ENSAPEG00000020115	SCAF8	88	97.015	Amphiprion_percula
ENSLBEG00000012484	-	64	86.780	ENSATEG00000006959	SCAF8	78	86.194	Anabas_testudineus
ENSLBEG00000012484	-	61	79.585	ENSACAG00000005282	SCAF8	71	80.000	Anolis_carolinensis
ENSLBEG00000012484	-	59	76.429	ENSANAG00000036184	SCAF8	63	76.296	Aotus_nancymaae
ENSLBEG00000012484	-	92	93.289	ENSACLG00000018828	SCAF8	85	96.269	Astatotilapia_calliptera
ENSLBEG00000012484	-	59	77.143	ENSBTAG00000031917	SCAF8	63	77.037	Bos_taurus
ENSLBEG00000012484	-	59	76.429	ENSCJAG00000012631	SCAF8	59	76.296	Callithrix_jacchus
ENSLBEG00000012484	-	59	77.500	ENSCAFG00000000570	SCAF8	62	77.407	Canis_familiaris
ENSLBEG00000012484	-	59	77.500	ENSCAFG00020015048	SCAF8	62	77.407	Canis_lupus_dingo
ENSLBEG00000012484	-	59	77.143	ENSCHIG00000025041	SCAF8	63	77.037	Capra_hircus
ENSLBEG00000012484	-	61	76.786	ENSTSYG00000010991	SCAF8	65	76.667	Carlito_syrichta
ENSLBEG00000012484	-	66	69.534	ENSCPOG00000030311	-	73	63.704	Cavia_porcellus
ENSLBEG00000012484	-	62	60.075	ENSCPOG00000022216	-	63	58.915	Cavia_porcellus
ENSLBEG00000012484	-	59	76.429	ENSCCAG00000024952	SCAF8	62	76.296	Cebus_capucinus
ENSLBEG00000012484	-	59	76.429	ENSCATG00000035361	SCAF8	63	76.296	Cercocebus_atys
ENSLBEG00000012484	-	63	76.071	ENSCLAG00000004910	SCAF8	67	75.926	Chinchilla_lanigera
ENSLBEG00000012484	-	59	76.429	ENSCSAG00000013430	SCAF8	61	76.296	Chlorocebus_sabaeus
ENSLBEG00000012484	-	63	77.143	ENSCPBG00000016330	SCAF8	60	77.037	Chrysemys_picta_bellii
ENSLBEG00000012484	-	59	76.429	ENSCANG00000039499	SCAF8	63	76.296	Colobus_angolensis_palliatus
ENSLBEG00000012484	-	63	76.786	ENSCGRG00001020167	Scaf8	59	76.667	Cricetulus_griseus_chok1gshd
ENSLBEG00000012484	-	63	76.786	ENSCGRG00000004120	Scaf8	59	76.667	Cricetulus_griseus_crigri
ENSLBEG00000012484	-	92	94.483	ENSCSEG00000000043	-	86	94.776	Cynoglossus_semilaevis
ENSLBEG00000012484	-	91	89.324	ENSCVAG00000000925	SCAF8	87	88.235	Cyprinodon_variegatus
ENSLBEG00000012484	-	58	74.638	ENSDNOG00000025271	SCAF8	63	71.937	Dasypus_novemcinctus
ENSLBEG00000012484	-	60	74.740	ENSDORG00000006391	Scaf8	62	75.185	Dipodomys_ordii
ENSLBEG00000012484	-	59	76.786	ENSEASG00005018879	SCAF8	62	76.667	Equus_asinus_asinus
ENSLBEG00000012484	-	59	76.786	ENSECAG00000005540	SCAF8	62	76.667	Equus_caballus
ENSLBEG00000012484	-	62	85.417	ENSELUG00000002779	SCAF8	83	84.815	Esox_lucius
ENSLBEG00000012484	-	59	77.857	ENSFCAG00000023424	SCAF8	62	77.778	Felis_catus
ENSLBEG00000012484	-	63	77.500	ENSFALG00000012433	SCAF8	75	77.407	Ficedula_albicollis
ENSLBEG00000012484	-	59	76.071	ENSFDAG00000010335	SCAF8	62	75.926	Fukomys_damarensis
ENSLBEG00000012484	-	92	91.946	ENSFHEG00000008284	SCAF8	90	94.776	Fundulus_heteroclitus
ENSLBEG00000012484	-	53	86.885	ENSGMOG00000018812	SCAF8	66	91.045	Gadus_morhua
ENSLBEG00000012484	-	63	77.857	ENSGALG00000013635	SCAF8	73	77.778	Gallus_gallus
ENSLBEG00000012484	-	92	90.698	ENSGAFG00000018033	SCAF8	83	92.989	Gambusia_affinis
ENSLBEG00000012484	-	65	91.275	ENSGACG00000006909	SCAF8	83	93.657	Gasterosteus_aculeatus
ENSLBEG00000012484	-	59	76.429	ENSGGOG00000008645	SCAF8	63	76.296	Gorilla_gorilla
ENSLBEG00000012484	-	92	93.289	ENSHBUG00000019537	SCAF8	85	96.269	Haplochromis_burtoni
ENSLBEG00000012484	-	59	76.071	ENSHGLG00000003619	SCAF8	67	75.926	Heterocephalus_glaber_female
ENSLBEG00000012484	-	59	76.071	ENSHGLG00100004708	SCAF8	67	75.926	Heterocephalus_glaber_male
ENSLBEG00000012484	-	59	75.714	ENSSTOG00000026043	SCAF8	67	75.556	Ictidomys_tridecemlineatus
ENSLBEG00000012484	-	63	75.887	ENSJJAG00000020480	Scaf8	67	76.296	Jaculus_jaculus
ENSLBEG00000012484	-	92	91.946	ENSKMAG00000012767	SCAF8	86	94.776	Kryptolebias_marmoratus
ENSLBEG00000012484	-	64	77.551	ENSLACG00000001394	SCAF8	81	79.259	Latimeria_chalumnae
ENSLBEG00000012484	-	64	78.201	ENSLOCG00000016856	SCAF8	77	82.593	Lepisosteus_oculatus
ENSLBEG00000012484	-	62	78.214	ENSLAFG00000000022	SCAF8	68	78.148	Loxodonta_africana
ENSLBEG00000012484	-	59	76.429	ENSMFAG00000032738	SCAF8	62	76.296	Macaca_fascicularis
ENSLBEG00000012484	-	59	76.429	ENSMMUG00000015163	SCAF8	62	76.296	Macaca_mulatta
ENSLBEG00000012484	-	59	76.429	ENSMNEG00000043466	SCAF8	63	76.296	Macaca_nemestrina
ENSLBEG00000012484	-	59	76.429	ENSMLEG00000034845	SCAF8	63	76.296	Mandrillus_leucophaeus
ENSLBEG00000012484	-	89	90.234	ENSMAMG00000009457	SCAF8	88	89.453	Mastacembelus_armatus
ENSLBEG00000012484	-	92	93.289	ENSMZEG00005005698	SCAF8	85	96.269	Maylandia_zebra
ENSLBEG00000012484	-	58	77.500	ENSMGAG00000012762	SCAF8	70	77.407	Meleagris_gallopavo
ENSLBEG00000012484	-	63	76.786	ENSMAUG00000009513	Scaf8	62	76.667	Mesocricetus_auratus
ENSLBEG00000012484	-	60	76.125	ENSMICG00000028965	SCAF8	62	76.667	Microcebus_murinus
ENSLBEG00000012484	-	63	76.786	ENSMOCG00000014950	Scaf8	59	76.667	Microtus_ochrogaster
ENSLBEG00000012484	-	90	87.687	ENSMMOG00000002216	SCAF8	87	86.940	Mola_mola
ENSLBEG00000012484	-	63	77.857	ENSMODG00000008301	SCAF8	67	77.778	Monodelphis_domestica
ENSLBEG00000012484	-	90	94.030	ENSMALG00000011584	SCAF8	86	94.030	Monopterus_albus
ENSLBEG00000012484	-	57	75.926	MGP_CAROLIEiJ_G0021016	Scaf8	59	76.296	Mus_caroli
ENSLBEG00000012484	-	57	75.556	ENSMUSG00000046201	Scaf8	59	75.926	Mus_musculus
ENSLBEG00000012484	-	55	75.926	MGP_PahariEiJ_G0023334	Scaf8	59	76.296	Mus_pahari
ENSLBEG00000012484	-	59	77.143	ENSMPUG00000001974	SCAF8	61	77.037	Mustela_putorius_furo
ENSLBEG00000012484	-	63	75.532	ENSMLUG00000029190	SCAF8	62	75.926	Myotis_lucifugus
ENSLBEG00000012484	-	63	75.357	ENSNGAG00000012332	Scaf8	62	75.185	Nannospalax_galili
ENSLBEG00000012484	-	72	85.197	ENSNBRG00000009067	SCAF8	82	88.806	Neolamprologus_brichardi
ENSLBEG00000012484	-	58	74.906	ENSNLEG00000015509	SCAF8	61	71.206	Nomascus_leucogenys
ENSLBEG00000012484	-	59	75.714	ENSODEG00000007296	SCAF8	62	75.556	Octodon_degus
ENSLBEG00000012484	-	64	93.289	ENSONIG00000008119	SCAF8	79	96.269	Oreochromis_niloticus
ENSLBEG00000012484	-	59	76.429	ENSOCUG00000026063	SCAF8	67	76.296	Oryctolagus_cuniculus
ENSLBEG00000012484	-	92	92.617	ENSORLG00000017358	SCAF8	84	95.522	Oryzias_latipes
ENSLBEG00000012484	-	92	92.282	ENSORLG00020002214	SCAF8	83	95.149	Oryzias_latipes_hni
ENSLBEG00000012484	-	92	92.617	ENSORLG00015015779	SCAF8	84	95.522	Oryzias_latipes_hsok
ENSLBEG00000012484	-	92	92.953	ENSOMEG00000015471	SCAF8	83	95.896	Oryzias_melastigma
ENSLBEG00000012484	-	61	77.143	ENSOARG00000004159	SCAF8	64	77.037	Ovis_aries
ENSLBEG00000012484	-	59	76.429	ENSPPAG00000039826	SCAF8	63	76.296	Pan_paniscus
ENSLBEG00000012484	-	59	77.857	ENSPPRG00000023175	SCAF8	62	77.778	Panthera_pardus
ENSLBEG00000012484	-	59	77.857	ENSPTIG00000014836	SCAF8	63	77.778	Panthera_tigris_altaica
ENSLBEG00000012484	-	59	76.429	ENSPTRG00000018727	SCAF8	62	76.296	Pan_troglodytes
ENSLBEG00000012484	-	59	76.429	ENSPANG00000017489	SCAF8	59	76.296	Papio_anubis
ENSLBEG00000012484	-	63	90.299	ENSPKIG00000021212	SCAF8	74	90.299	Paramormyrops_kingsleyae
ENSLBEG00000012484	-	55	68.605	ENSPSIG00000008614	SCAF8	61	67.901	Pelodiscus_sinensis
ENSLBEG00000012484	-	63	76.429	ENSPEMG00000010531	Scaf8	60	76.296	Peromyscus_maniculatus_bairdii
ENSLBEG00000012484	-	60	78.929	ENSPCIG00000001141	SCAF8	63	78.889	Phascolarctos_cinereus
ENSLBEG00000012484	-	92	92.617	ENSPFOG00000004176	SCAF8	83	95.522	Poecilia_formosa
ENSLBEG00000012484	-	92	92.617	ENSPLAG00000021432	SCAF8	83	95.522	Poecilia_latipinna
ENSLBEG00000012484	-	92	92.282	ENSPMEG00000007591	SCAF8	83	95.149	Poecilia_mexicana
ENSLBEG00000012484	-	92	91.611	ENSPREG00000000652	SCAF8	83	94.403	Poecilia_reticulata
ENSLBEG00000012484	-	58	74.906	ENSPPYG00000017121	SCAF8	66	71.206	Pongo_abelii
ENSLBEG00000012484	-	60	76.471	ENSPCOG00000002067	SCAF8	76	77.037	Propithecus_coquereli
ENSLBEG00000012484	-	62	75.714	ENSPVAG00000005582	SCAF8	65	75.556	Pteropus_vampyrus
ENSLBEG00000012484	-	85	93.289	ENSPNYG00000007277	SCAF8	86	96.269	Pundamilia_nyererei
ENSLBEG00000012484	-	69	84.967	ENSPNAG00000024740	SCAF8	67	87.313	Pygocentrus_nattereri
ENSLBEG00000012484	-	54	75.556	ENSRNOG00000016919	Scaf8	62	75.926	Rattus_norvegicus
ENSLBEG00000012484	-	59	76.429	ENSRBIG00000035769	SCAF8	63	76.296	Rhinopithecus_bieti
ENSLBEG00000012484	-	59	76.429	ENSRROG00000013580	SCAF8	63	76.296	Rhinopithecus_roxellana
ENSLBEG00000012484	-	59	76.071	ENSSBOG00000027023	SCAF8	62	75.926	Saimiri_boliviensis_boliviensis
ENSLBEG00000012484	-	60	80.645	ENSSHAG00000009915	SCAF8	63	79.630	Sarcophilus_harrisii
ENSLBEG00000012484	-	72	58.027	ENSSFOG00015009481	SCAF8	75	91.165	Scleropages_formosus
ENSLBEG00000012484	-	50	41.151	ENSSMAG00000003738	scaf4b	53	61.635	Scophthalmus_maximus
ENSLBEG00000012484	-	93	94.539	ENSSMAG00000008275	SCAF8	87	94.776	Scophthalmus_maximus
ENSLBEG00000012484	-	64	77.731	ENSSPUG00000015219	SCAF8	70	77.037	Sphenodon_punctatus
ENSLBEG00000012484	-	71	74.926	ENSSPAG00000019433	SCAF8	69	74.827	Stegastes_partitus
ENSLBEG00000012484	-	59	77.143	ENSSSCG00000004070	SCAF8	64	77.037	Sus_scrofa
ENSLBEG00000012484	-	63	77.143	ENSTGUG00000011151	SCAF8	71	77.037	Taeniopygia_guttata
ENSLBEG00000012484	-	93	90.000	ENSTRUG00000009243	SCAF8	86	94.403	Takifugu_rubripes
ENSLBEG00000012484	-	65	86.230	ENSTNIG00000016885	SCAF8	82	94.757	Tetraodon_nigroviridis
ENSLBEG00000012484	-	59	76.786	ENSTTRG00000014538	SCAF8	63	76.667	Tursiops_truncatus
ENSLBEG00000012484	-	59	77.500	ENSUAMG00000024736	SCAF8	63	77.407	Ursus_americanus
ENSLBEG00000012484	-	59	77.500	ENSUMAG00000013404	SCAF8	64	77.407	Ursus_maritimus
ENSLBEG00000012484	-	59	77.500	ENSVVUG00000007532	SCAF8	68	77.407	Vulpes_vulpes
ENSLBEG00000012484	-	92	91.275	ENSXMAG00000019192	SCAF8	82	94.030	Xiphophorus_maculatus