EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000012582 (Gene tree)
Gene ID: 109980979
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10695 bases
Position: chrFKLU01000027.1:2196771-2207465
Accession: 109980979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000016298	PRP1_N	PF06424.12	3.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017236	-	2984	XM_020629576	ENSLBEP00000016298	969 (aa)	XP_020485232	UPI0009B42659

Gene Model

Click here to download ENSLBEG00000012582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012582's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012582	prpf6	96	91.392	ENSG00000101161	PRPF6	100	91.392	Homo_sapiens
ENSLBEG00000012582	prpf6	100	97.936	ENSAPOG00000010395	prpf6	100	97.936	Acanthochromis_polyacanthus
ENSLBEG00000012582	prpf6	96	90.870	ENSAMEG00000001916	PRPF6	99	90.870	Ailuropoda_melanoleuca
ENSLBEG00000012582	prpf6	100	96.698	ENSACIG00000019862	prpf6	100	96.698	Amphilophus_citrinellus
ENSLBEG00000012582	prpf6	100	98.039	ENSAOCG00000012988	prpf6	100	98.039	Amphiprion_ocellaris
ENSLBEG00000012582	prpf6	96	91.505	ENSAPEG00000008301	prpf6	100	91.613	Amphiprion_percula
ENSLBEG00000012582	prpf6	100	97.317	ENSATEG00000005581	prpf6	100	97.317	Anabas_testudineus
ENSLBEG00000012582	prpf6	96	91.605	ENSACAG00000006464	PRPF6	95	91.605	Anolis_carolinensis
ENSLBEG00000012582	prpf6	96	92.226	ENSANAG00000012661	PRPF6	100	92.226	Aotus_nancymaae
ENSLBEG00000012582	prpf6	100	96.594	ENSACLG00000025875	prpf6	100	96.594	Astatotilapia_calliptera
ENSLBEG00000012582	prpf6	97	93.856	ENSAMXG00000001929	prpf6	100	92.213	Astyanax_mexicanus
ENSLBEG00000012582	prpf6	96	91.817	ENSBTAG00000011656	PRPF6	100	91.817	Bos_taurus
ENSLBEG00000012582	prpf6	96	91.392	ENSCJAG00000010616	PRPF6	100	91.392	Callithrix_jacchus
ENSLBEG00000012582	prpf6	96	91.923	ENSCAFG00000013165	PRPF6	100	91.923	Canis_familiaris
ENSLBEG00000012582	prpf6	96	91.923	ENSCAFG00020002050	PRPF6	100	91.923	Canis_lupus_dingo
ENSLBEG00000012582	prpf6	96	91.817	ENSCHIG00000018187	PRPF6	100	91.817	Capra_hircus
ENSLBEG00000012582	prpf6	96	91.817	ENSTSYG00000007814	PRPF6	100	91.817	Carlito_syrichta
ENSLBEG00000012582	prpf6	93	90.949	ENSCAPG00000015077	PRPF6	100	90.513	Cavia_aperea
ENSLBEG00000012582	prpf6	96	92.242	ENSCPOG00000007518	PRPF6	100	92.242	Cavia_porcellus
ENSLBEG00000012582	prpf6	96	88.523	ENSCCAG00000024564	PRPF6	100	88.523	Cebus_capucinus
ENSLBEG00000012582	prpf6	96	91.498	ENSCATG00000037473	PRPF6	100	91.498	Cercocebus_atys
ENSLBEG00000012582	prpf6	96	88.523	ENSCLAG00000003854	PRPF6	100	88.523	Chinchilla_lanigera
ENSLBEG00000012582	prpf6	96	86.800	ENSCSAG00000016742	PRPF6	100	86.800	Chlorocebus_sabaeus
ENSLBEG00000012582	prpf6	81	77.073	ENSCHOG00000003315	-	98	76.860	Choloepus_hoffmanni
ENSLBEG00000012582	prpf6	98	90.843	ENSCPBG00000013964	PRPF6	96	92.234	Chrysemys_picta_bellii
ENSLBEG00000012582	prpf6	96	72.093	ENSCING00000008817	-	99	72.093	Ciona_intestinalis
ENSLBEG00000012582	prpf6	96	91.286	ENSCANG00000038230	PRPF6	100	91.286	Colobus_angolensis_palliatus
ENSLBEG00000012582	prpf6	96	92.242	ENSCGRG00001022666	Prpf6	100	92.242	Cricetulus_griseus_chok1gshd
ENSLBEG00000012582	prpf6	96	91.505	ENSCSEG00000018561	prpf6	100	91.505	Cynoglossus_semilaevis
ENSLBEG00000012582	prpf6	100	96.388	ENSCVAG00000010550	prpf6	100	96.388	Cyprinodon_variegatus
ENSLBEG00000012582	prpf6	100	92.213	ENSDARG00000091367	prpf6	100	93.644	Danio_rerio
ENSLBEG00000012582	prpf6	96	91.498	ENSDNOG00000040544	PRPF6	100	91.605	Dasypus_novemcinctus
ENSLBEG00000012582	prpf6	87	91.822	ENSDORG00000005406	Prpf6	100	91.822	Dipodomys_ordii
ENSLBEG00000012582	prpf6	96	70.968	FBgn0036828	CG6841	99	71.183	Drosophila_melanogaster
ENSLBEG00000012582	prpf6	83	90.643	ENSETEG00000004447	PRPF6	85	90.643	Echinops_telfairi
ENSLBEG00000012582	prpf6	96	85.608	ENSEBUG00000008835	prpf6	100	85.608	Eptatretus_burgeri
ENSLBEG00000012582	prpf6	99	89.886	ENSEASG00005023115	PRPF6	100	92.030	Equus_asinus_asinus
ENSLBEG00000012582	prpf6	96	87.779	ENSECAG00000013983	PRPF6	100	87.779	Equus_caballus
ENSLBEG00000012582	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSLBEG00000012582	prpf6	97	94.592	ENSELUG00000001945	prpf6	94	94.592	Esox_lucius
ENSLBEG00000012582	prpf6	96	91.923	ENSFCAG00000001183	PRPF6	100	91.923	Felis_catus
ENSLBEG00000012582	prpf6	96	91.640	ENSFALG00000010326	-	98	91.746	Ficedula_albicollis
ENSLBEG00000012582	prpf6	96	85.532	ENSFALG00000006046	-	97	85.806	Ficedula_albicollis
ENSLBEG00000012582	prpf6	96	90.755	ENSFDAG00000006451	PRPF6	100	91.837	Fukomys_damarensis
ENSLBEG00000012582	prpf6	99	96.381	ENSFHEG00000000560	prpf6	99	96.381	Fundulus_heteroclitus
ENSLBEG00000012582	prpf6	97	94.168	ENSGMOG00000015622	prpf6	99	94.168	Gadus_morhua
ENSLBEG00000012582	prpf6	96	91.711	ENSGALG00000006001	PRPF6	100	91.817	Gallus_gallus
ENSLBEG00000012582	prpf6	100	91.744	ENSGAFG00000021109	prpf6	100	91.744	Gambusia_affinis
ENSLBEG00000012582	prpf6	97	96.398	ENSGACG00000002576	prpf6	100	96.398	Gasterosteus_aculeatus
ENSLBEG00000012582	prpf6	98	90.938	ENSGAGG00000008653	PRPF6	96	92.340	Gopherus_agassizii
ENSLBEG00000012582	prpf6	96	91.392	ENSGGOG00000016876	PRPF6	100	91.392	Gorilla_gorilla
ENSLBEG00000012582	prpf6	100	96.594	ENSHBUG00000004496	prpf6	100	96.594	Haplochromis_burtoni
ENSLBEG00000012582	prpf6	96	92.136	ENSHGLG00000009222	PRPF6	100	92.136	Heterocephalus_glaber_female
ENSLBEG00000012582	prpf6	93	92.039	ENSHGLG00100016600	PRPF6	100	92.039	Heterocephalus_glaber_male
ENSLBEG00000012582	prpf6	100	95.872	ENSHCOG00000011513	prpf6	100	95.872	Hippocampus_comes
ENSLBEG00000012582	prpf6	100	92.094	ENSIPUG00000004912	prpf6	100	92.094	Ictalurus_punctatus
ENSLBEG00000012582	prpf6	96	89.703	ENSSTOG00000002922	PRPF6	100	89.278	Ictidomys_tridecemlineatus
ENSLBEG00000012582	prpf6	96	92.242	ENSJJAG00000000836	Prpf6	100	92.242	Jaculus_jaculus
ENSLBEG00000012582	prpf6	100	96.801	ENSKMAG00000017800	prpf6	100	96.801	Kryptolebias_marmoratus
ENSLBEG00000012582	prpf6	96	93.617	ENSLOCG00000004827	prpf6	96	92.340	Lepisosteus_oculatus
ENSLBEG00000012582	prpf6	96	91.498	ENSLAFG00000005272	PRPF6	100	91.498	Loxodonta_africana
ENSLBEG00000012582	prpf6	96	91.286	ENSMFAG00000037542	PRPF6	100	91.286	Macaca_fascicularis
ENSLBEG00000012582	prpf6	96	85.350	ENSMMUG00000015558	PRPF6	98	92.721	Macaca_mulatta
ENSLBEG00000012582	prpf6	96	79.025	ENSMNEG00000045555	PRPF6	100	79.025	Macaca_nemestrina
ENSLBEG00000012582	prpf6	100	96.698	ENSMAMG00000010718	prpf6	100	96.698	Mastacembelus_armatus
ENSLBEG00000012582	prpf6	90	96.571	ENSMZEG00005026539	prpf6	100	96.571	Maylandia_zebra
ENSLBEG00000012582	prpf6	97	96.695	ENSMZEG00005015261	-	100	96.695	Maylandia_zebra
ENSLBEG00000012582	prpf6	93	91.821	ENSMGAG00000006634	PRPF6	100	91.930	Meleagris_gallopavo
ENSLBEG00000012582	prpf6	96	92.242	ENSMAUG00000013969	Prpf6	100	92.242	Mesocricetus_auratus
ENSLBEG00000012582	prpf6	84	90.998	ENSMICG00000017793	PRPF6	98	90.999	Microcebus_murinus
ENSLBEG00000012582	prpf6	96	92.136	ENSMOCG00000001701	Prpf6	100	92.136	Microtus_ochrogaster
ENSLBEG00000012582	prpf6	96	97.204	ENSMMOG00000020419	prpf6	100	97.204	Mola_mola
ENSLBEG00000012582	prpf6	96	91.829	ENSMODG00000017051	PRPF6	99	91.829	Monodelphis_domestica
ENSLBEG00000012582	prpf6	95	97.174	ENSMALG00000000089	prpf6	100	97.174	Monopterus_albus
ENSLBEG00000012582	prpf6	96	85.866	MGP_CAROLIEiJ_G0024814	Prpf6	100	92.593	Mus_caroli
ENSLBEG00000012582	prpf6	96	92.242	ENSMUSG00000002455	Prpf6	100	92.593	Mus_musculus
ENSLBEG00000012582	prpf6	96	92.242	MGP_PahariEiJ_G0026262	Prpf6	100	92.593	Mus_pahari
ENSLBEG00000012582	prpf6	96	92.242	MGP_SPRETEiJ_G0025741	Prpf6	100	92.593	Mus_spretus
ENSLBEG00000012582	prpf6	88	92.224	ENSMPUG00000008673	PRPF6	99	91.776	Mustela_putorius_furo
ENSLBEG00000012582	prpf6	96	92.349	ENSNGAG00000003365	Prpf6	100	92.349	Nannospalax_galili
ENSLBEG00000012582	prpf6	100	96.698	ENSNBRG00000015025	prpf6	100	96.698	Neolamprologus_brichardi
ENSLBEG00000012582	prpf6	96	91.286	ENSNLEG00000010208	PRPF6	100	91.286	Nomascus_leucogenys
ENSLBEG00000012582	prpf6	96	83.133	ENSMEUG00000009824	-	90	83.399	Notamacropus_eugenii
ENSLBEG00000012582	prpf6	96	86.291	ENSODEG00000004841	PRPF6	100	86.291	Octodon_degus
ENSLBEG00000012582	prpf6	100	96.801	ENSONIG00000017406	prpf6	100	96.801	Oreochromis_niloticus
ENSLBEG00000012582	prpf6	96	92.136	ENSOANG00000004920	PRPF6	100	92.136	Ornithorhynchus_anatinus
ENSLBEG00000012582	prpf6	95	90.021	ENSOCUG00000014151	PRPF6	100	90.021	Oryctolagus_cuniculus
ENSLBEG00000012582	prpf6	100	95.666	ENSORLG00000009592	prpf6	100	95.666	Oryzias_latipes
ENSLBEG00000012582	prpf6	100	95.562	ENSORLG00020001458	prpf6	100	95.562	Oryzias_latipes_hni
ENSLBEG00000012582	prpf6	100	95.562	ENSORLG00015018762	prpf6	100	95.562	Oryzias_latipes_hsok
ENSLBEG00000012582	prpf6	100	95.872	ENSOMEG00000012174	prpf6	100	95.872	Oryzias_melastigma
ENSLBEG00000012582	prpf6	96	84.926	ENSOGAG00000007573	PRPF6	100	84.926	Otolemur_garnettii
ENSLBEG00000012582	prpf6	96	91.392	ENSOARG00000008776	PRPF6	99	91.392	Ovis_aries
ENSLBEG00000012582	prpf6	96	91.392	ENSPPAG00000008686	PRPF6	100	91.392	Pan_paniscus
ENSLBEG00000012582	prpf6	96	91.923	ENSPPRG00000008497	PRPF6	100	91.923	Panthera_pardus
ENSLBEG00000012582	prpf6	93	91.821	ENSPTIG00000011184	PRPF6	97	91.821	Panthera_tigris_altaica
ENSLBEG00000012582	prpf6	96	91.392	ENSPTRG00000013765	PRPF6	100	91.392	Pan_troglodytes
ENSLBEG00000012582	prpf6	96	91.073	ENSPANG00000024135	PRPF6	100	91.073	Papio_anubis
ENSLBEG00000012582	prpf6	98	92.620	ENSPKIG00000005627	prpf6	99	94.255	Paramormyrops_kingsleyae
ENSLBEG00000012582	prpf6	90	91.723	ENSPSIG00000007717	PRPF6	100	91.723	Pelodiscus_sinensis
ENSLBEG00000012582	prpf6	100	94.948	ENSPMGG00000008925	prpf6	100	94.948	Periophthalmus_magnuspinnatus
ENSLBEG00000012582	prpf6	96	92.242	ENSPEMG00000016036	Prpf6	100	92.242	Peromyscus_maniculatus_bairdii
ENSLBEG00000012582	prpf6	98	86.131	ENSPMAG00000006144	prpf6	99	87.527	Petromyzon_marinus
ENSLBEG00000012582	prpf6	96	92.242	ENSPCIG00000017909	PRPF6	100	92.242	Phascolarctos_cinereus
ENSLBEG00000012582	prpf6	100	95.706	ENSPFOG00000006431	prpf6	99	95.706	Poecilia_formosa
ENSLBEG00000012582	prpf6	100	96.491	ENSPLAG00000005974	prpf6	100	96.491	Poecilia_latipinna
ENSLBEG00000012582	prpf6	100	96.388	ENSPMEG00000009977	prpf6	100	96.388	Poecilia_mexicana
ENSLBEG00000012582	prpf6	100	96.285	ENSPREG00000017993	prpf6	95	96.285	Poecilia_reticulata
ENSLBEG00000012582	prpf6	96	90.861	ENSPPYG00000011256	PRPF6	100	90.861	Pongo_abelii
ENSLBEG00000012582	prpf6	91	93.627	ENSPCAG00000006536	PRPF6	88	93.627	Procavia_capensis
ENSLBEG00000012582	prpf6	96	91.392	ENSPCOG00000016881	PRPF6	100	91.392	Propithecus_coquereli
ENSLBEG00000012582	prpf6	96	85.972	ENSPVAG00000014316	PRPF6	100	85.972	Pteropus_vampyrus
ENSLBEG00000012582	prpf6	100	83.060	ENSPNYG00000001939	prpf6	100	83.060	Pundamilia_nyererei
ENSLBEG00000012582	prpf6	100	92.828	ENSPNAG00000015606	prpf6	100	92.828	Pygocentrus_nattereri
ENSLBEG00000012582	prpf6	96	92.136	ENSRNOG00000051498	Prpf6	100	92.136	Rattus_norvegicus
ENSLBEG00000012582	prpf6	96	91.286	ENSRBIG00000043613	PRPF6	100	91.286	Rhinopithecus_bieti
ENSLBEG00000012582	prpf6	96	88.360	ENSRROG00000040969	PRPF6	98	91.349	Rhinopithecus_roxellana
ENSLBEG00000012582	prpf6	87	88.142	ENSSBOG00000020632	PRPF6	93	86.678	Saimiri_boliviensis_boliviensis
ENSLBEG00000012582	prpf6	96	92.242	ENSSHAG00000016810	PRPF6	100	92.242	Sarcophilus_harrisii
ENSLBEG00000012582	prpf6	95	94.409	ENSSFOG00015020859	prpf6	100	94.409	Scleropages_formosus
ENSLBEG00000012582	prpf6	100	96.388	ENSSMAG00000008112	prpf6	100	96.388	Scophthalmus_maximus
ENSLBEG00000012582	prpf6	100	97.317	ENSSDUG00000016142	prpf6	100	97.317	Seriola_dumerili
ENSLBEG00000012582	prpf6	100	97.317	ENSSLDG00000025283	prpf6	99	97.317	Seriola_lalandi_dorsalis
ENSLBEG00000012582	prpf6	90	90.352	ENSSPUG00000018260	PRPF6	100	90.352	Sphenodon_punctatus
ENSLBEG00000012582	prpf6	100	97.317	ENSSPAG00000015850	prpf6	100	97.317	Stegastes_partitus
ENSLBEG00000012582	prpf6	97	90.471	ENSSSCG00000029119	PRPF6	100	91.043	Sus_scrofa
ENSLBEG00000012582	prpf6	96	91.737	ENSTGUG00000007221	PRPF6	100	91.843	Taeniopygia_guttata
ENSLBEG00000012582	prpf6	100	95.562	ENSTRUG00000002920	prpf6	100	95.562	Takifugu_rubripes
ENSLBEG00000012582	prpf6	96	89.904	ENSTNIG00000017873	prpf6	100	89.904	Tetraodon_nigroviridis
ENSLBEG00000012582	prpf6	85	93.333	ENSTBEG00000005348	PRPF6	85	93.333	Tupaia_belangeri
ENSLBEG00000012582	prpf6	96	91.605	ENSTTRG00000013068	PRPF6	100	91.605	Tursiops_truncatus
ENSLBEG00000012582	prpf6	98	87.409	ENSUMAG00000021631	PRPF6	98	90.403	Ursus_maritimus
ENSLBEG00000012582	prpf6	96	91.923	ENSVVUG00000014948	PRPF6	100	91.923	Vulpes_vulpes
ENSLBEG00000012582	prpf6	96	91.809	ENSXETG00000012054	prpf6	97	91.809	Xenopus_tropicalis
ENSLBEG00000012582	prpf6	100	96.285	ENSXCOG00000008082	prpf6	100	96.285	Xiphophorus_couchianus
ENSLBEG00000012582	prpf6	100	96.388	ENSXMAG00000015581	prpf6	100	96.388	Xiphophorus_maculatus