EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000012700 (Gene tree)
Gene ID: 109976604
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9498 bases
Position: chrFKLU01000002.1:371555-381052
Accession: 109976604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000016481	KH_1	PF00013.29	1.1e-67	1	4
ENSLBEP00000016481	KH_1	PF00013.29	1.1e-67	2	4
ENSLBEP00000016481	KH_1	PF00013.29	1.1e-67	3	4
ENSLBEP00000016481	KH_1	PF00013.29	1.1e-67	4	4
ENSLBEP00000016434	KH_1	PF00013.29	1.3e-67	1	4
ENSLBEP00000016434	KH_1	PF00013.29	1.3e-67	2	4
ENSLBEP00000016434	KH_1	PF00013.29	1.3e-67	3	4
ENSLBEP00000016434	KH_1	PF00013.29	1.3e-67	4	4
ENSLBEP00000016520	KH_1	PF00013.29	1.7e-67	1	4
ENSLBEP00000016520	KH_1	PF00013.29	1.7e-67	2	4
ENSLBEP00000016520	KH_1	PF00013.29	1.7e-67	3	4
ENSLBEP00000016520	KH_1	PF00013.29	1.7e-67	4	4
ENSLBEP00000016457	KH_1	PF00013.29	4.2e-52	1	3
ENSLBEP00000016457	KH_1	PF00013.29	4.2e-52	2	3
ENSLBEP00000016457	KH_1	PF00013.29	4.2e-52	3	3
ENSLBEP00000016481	KH_2	PF07650.17	9.3e-21	1	2
ENSLBEP00000016481	KH_2	PF07650.17	9.3e-21	2	2
ENSLBEP00000016434	KH_2	PF07650.17	1.1e-20	1	2
ENSLBEP00000016434	KH_2	PF07650.17	1.1e-20	2	2
ENSLBEP00000016520	KH_2	PF07650.17	1.4e-20	1	2
ENSLBEP00000016520	KH_2	PF07650.17	1.4e-20	2	2
ENSLBEP00000016457	KH_2	PF07650.17	6.9e-17	1	2
ENSLBEP00000016457	KH_2	PF07650.17	6.9e-17	2	2
ENSLBEP00000016457	DUF1897	PF09005.10	9.5e-15	1	2
ENSLBEP00000016457	DUF1897	PF09005.10	9.5e-15	2	2
ENSLBEP00000016434	DUF1897	PF09005.10	1.1e-14	1	2
ENSLBEP00000016434	DUF1897	PF09005.10	1.1e-14	2	2
ENSLBEP00000016520	DUF1897	PF09005.10	1.5e-14	1	2
ENSLBEP00000016520	DUF1897	PF09005.10	1.5e-14	2	2
ENSLBEP00000016481	DUF1897	PF09005.10	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017463	-	2283	XM_020626672	ENSLBEP00000016520	690 (aa)	XP_020482328	-
ENSLBET00000017398	-	3831	-	ENSLBEP00000016457	632 (aa)	-	-
ENSLBET00000017373	-	3903	XM_020626722	ENSLBEP00000016434	656 (aa)	XP_020482378	-
ENSLBET00000017423	-	3828	XM_020626915	ENSLBEP00000016481	631 (aa)	XP_020482571	-

Gene Model

Click here to download ENSLBEG00000012700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000012700	fubp1	58	37.879	ENSLBEG00000028542	nova1	58	37.879
ENSLBEG00000012700	fubp1	67	36.486	ENSLBEG00000006201	pcbp3	65	37.681
ENSLBEG00000012700	fubp1	66	41.333	ENSLBEG00000015211	PCBP2	71	43.284
ENSLBEG00000012700	fubp1	93	50.507	ENSLBEG00000007845	-	96	49.495
ENSLBEG00000012700	fubp1	81	53.915	ENSLBEG00000005191	khsrp	96	54.874
ENSLBEG00000012700	fubp1	94	42.599	ENSLBEG00000017826	FUBP3	94	42.390
ENSLBEG00000012700	fubp1	58	32.143	ENSLBEG00000005339	igf2bp3	62	31.677
ENSLBEG00000012700	fubp1	61	41.096	ENSLBEG00000010080	pcbp2	68	40.299
ENSLBEG00000012700	fubp1	60	40.984	ENSLBEG00000023074	zgc:110045	88	40.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012700	fubp1	72	74.947	ENSG00000162613	FUBP1	100	67.216	Homo_sapiens
ENSLBEG00000012700	fubp1	92	94.182	ENSAPOG00000014845	fubp1	92	94.182	Acanthochromis_polyacanthus
ENSLBEG00000012700	fubp1	72	73.566	ENSAMEG00000007372	FUBP1	100	66.618	Ailuropoda_melanoleuca
ENSLBEG00000012700	fubp1	97	86.119	ENSACIG00000020024	fubp1	99	85.522	Amphilophus_citrinellus
ENSLBEG00000012700	fubp1	97	84.235	ENSAPEG00000012232	fubp1	99	85.373	Amphiprion_percula
ENSLBEG00000012700	fubp1	97	93.731	ENSATEG00000018619	fubp1	99	93.731	Anabas_testudineus
ENSLBEG00000012700	fubp1	68	76.566	ENSAPLG00000005965	FUBP1	100	67.130	Anas_platyrhynchos
ENSLBEG00000012700	fubp1	72	74.167	ENSACAG00000006310	FUBP1	96	67.479	Anolis_carolinensis
ENSLBEG00000012700	fubp1	97	92.996	ENSACLG00000006708	fubp1	99	92.388	Astatotilapia_calliptera
ENSLBEG00000012700	fubp1	83	84.369	ENSAMXG00000005525	fubp1	99	81.172	Astyanax_mexicanus
ENSLBEG00000012700	fubp1	72	75.159	ENSCJAG00000007062	FUBP1	100	67.316	Callithrix_jacchus
ENSLBEG00000012700	fubp1	72	74.790	ENSCAFG00000020361	FUBP1	100	67.365	Canis_familiaris
ENSLBEG00000012700	fubp1	68	75.917	ENSTSYG00000000148	FUBP1	100	67.516	Carlito_syrichta
ENSLBEG00000012700	fubp1	56	80.769	ENSCAPG00000011052	-	67	75.357	Cavia_aperea
ENSLBEG00000012700	fubp1	72	75.000	ENSCPOG00000002757	FUBP1	98	70.270	Cavia_porcellus
ENSLBEG00000012700	fubp1	93	60.870	ENSCCAG00000036537	FUBP1	100	60.165	Cebus_capucinus
ENSLBEG00000012700	fubp1	72	74.580	ENSCATG00000042126	FUBP1	100	67.216	Cercocebus_atys
ENSLBEG00000012700	fubp1	72	75.000	ENSCLAG00000005621	FUBP1	100	71.519	Chinchilla_lanigera
ENSLBEG00000012700	fubp1	72	74.580	ENSCSAG00000001402	FUBP1	100	67.216	Chlorocebus_sabaeus
ENSLBEG00000012700	fubp1	72	74.580	ENSCHOG00000008177	FUBP1	98	67.344	Choloepus_hoffmanni
ENSLBEG00000012700	fubp1	72	76.180	ENSCGRG00001007103	Fubp1	100	67.718	Cricetulus_griseus_chok1gshd
ENSLBEG00000012700	fubp1	68	76.322	ENSCGRG00000003372	Fubp1	98	69.595	Cricetulus_griseus_crigri
ENSLBEG00000012700	fubp1	99	87.172	ENSCSEG00000021412	fubp1	99	86.880	Cynoglossus_semilaevis
ENSLBEG00000012700	fubp1	97	91.952	ENSCVAG00000014487	fubp1	99	91.952	Cyprinodon_variegatus
ENSLBEG00000012700	fubp1	97	79.854	ENSDARG00000029248	fubp1	99	80.438	Danio_rerio
ENSLBEG00000012700	fubp1	80	58.824	ENSDNOG00000034565	-	85	49.660	Dasypus_novemcinctus
ENSLBEG00000012700	fubp1	72	75.000	ENSDORG00000016534	Fubp1	98	67.166	Dipodomys_ordii
ENSLBEG00000012700	fubp1	77	74.359	ENSETEG00000000948	-	58	73.056	Echinops_telfairi
ENSLBEG00000012700	fubp1	68	65.152	ENSEBUG00000016143	fubp1	64	63.235	Eptatretus_burgeri
ENSLBEG00000012700	fubp1	73	79.868	ENSEEUG00000001287	FUBP1	87	67.206	Erinaceus_europaeus
ENSLBEG00000012700	fubp1	97	83.800	ENSELUG00000007990	fubp1	99	83.947	Esox_lucius
ENSLBEG00000012700	fubp1	72	75.693	ENSFALG00000005768	FUBP1	98	67.006	Ficedula_albicollis
ENSLBEG00000012700	fubp1	72	74.788	ENSFDAG00000014210	FUBP1	100	69.595	Fukomys_damarensis
ENSLBEG00000012700	fubp1	97	92.388	ENSFHEG00000005230	fubp1	99	92.239	Fundulus_heteroclitus
ENSLBEG00000012700	fubp1	97	81.101	ENSGMOG00000003370	fubp1	99	79.762	Gadus_morhua
ENSLBEG00000012700	fubp1	72	76.170	ENSGALG00000008939	FUBP1	99	67.686	Gallus_gallus
ENSLBEG00000012700	fubp1	97	94.030	ENSGAFG00000020972	fubp1	99	93.881	Gambusia_affinis
ENSLBEG00000012700	fubp1	97	88.905	ENSGACG00000016563	fubp1	99	88.905	Gasterosteus_aculeatus
ENSLBEG00000012700	fubp1	97	93.284	ENSHBUG00000009835	fubp1	99	92.687	Haplochromis_burtoni
ENSLBEG00000012700	fubp1	98	62.969	ENSHGLG00000002808	-	100	62.577	Heterocephalus_glaber_female
ENSLBEG00000012700	fubp1	72	75.000	ENSHGLG00000008415	-	100	71.519	Heterocephalus_glaber_female
ENSLBEG00000012700	fubp1	72	75.000	ENSHGLG00100003417	-	100	67.064	Heterocephalus_glaber_male
ENSLBEG00000012700	fubp1	98	63.268	ENSHGLG00100001414	-	100	63.037	Heterocephalus_glaber_male
ENSLBEG00000012700	fubp1	97	91.852	ENSHCOG00000000910	fubp1	99	92.889	Hippocampus_comes
ENSLBEG00000012700	fubp1	97	81.454	ENSIPUG00000009896	fubp1	99	81.157	Ictalurus_punctatus
ENSLBEG00000012700	fubp1	72	75.269	ENSSTOG00000014312	FUBP1	100	67.365	Ictidomys_tridecemlineatus
ENSLBEG00000012700	fubp1	72	75.322	ENSJJAG00000020069	Fubp1	100	69.595	Jaculus_jaculus
ENSLBEG00000012700	fubp1	97	91.382	ENSKMAG00000018897	fubp1	99	89.747	Kryptolebias_marmoratus
ENSLBEG00000012700	fubp1	95	79.198	ENSLOCG00000003745	fubp1	99	77.616	Lepisosteus_oculatus
ENSLBEG00000012700	fubp1	72	74.174	ENSLAFG00000003273	FUBP1	99	68.376	Loxodonta_africana
ENSLBEG00000012700	fubp1	72	74.947	ENSMFAG00000031825	FUBP1	100	67.166	Macaca_fascicularis
ENSLBEG00000012700	fubp1	72	75.054	ENSMMUG00000002899	FUBP1	100	67.216	Macaca_mulatta
ENSLBEG00000012700	fubp1	72	74.580	ENSMNEG00000045212	FUBP1	100	67.216	Macaca_nemestrina
ENSLBEG00000012700	fubp1	97	94.933	ENSMAMG00000007489	fubp1	99	94.337	Mastacembelus_armatus
ENSLBEG00000012700	fubp1	97	93.134	ENSMZEG00005024298	fubp1	99	92.537	Maylandia_zebra
ENSLBEG00000012700	fubp1	68	76.620	ENSMGAG00000009424	FUBP1	99	67.180	Meleagris_gallopavo
ENSLBEG00000012700	fubp1	72	75.000	ENSMAUG00000016428	Fubp1	98	70.270	Mesocricetus_auratus
ENSLBEG00000012700	fubp1	72	75.584	ENSMOCG00000014751	Fubp1	100	67.825	Microtus_ochrogaster
ENSLBEG00000012700	fubp1	83	90.070	ENSMMOG00000019463	fubp1	99	89.199	Mola_mola
ENSLBEG00000012700	fubp1	70	68.750	ENSMODG00000020804	FUBP1	100	62.702	Monodelphis_domestica
ENSLBEG00000012700	fubp1	97	93.134	ENSMALG00000015173	fubp1	99	92.537	Monopterus_albus
ENSLBEG00000012700	fubp1	72	75.589	MGP_CAROLIEiJ_G0025740	Fubp1	99	71.771	Mus_caroli
ENSLBEG00000012700	fubp1	72	75.375	ENSMUSG00000028034	Fubp1	99	71.587	Mus_musculus
ENSLBEG00000012700	fubp1	72	75.427	MGP_PahariEiJ_G0027191	Fubp1	99	71.639	Mus_pahari
ENSLBEG00000012700	fubp1	72	75.589	MGP_SPRETEiJ_G0026693	Fubp1	99	71.771	Mus_spretus
ENSLBEG00000012700	fubp1	72	73.415	ENSMLUG00000014802	FUBP1	100	65.543	Myotis_lucifugus
ENSLBEG00000012700	fubp1	72	72.187	ENSNGAG00000014302	Fubp1	98	69.595	Nannospalax_galili
ENSLBEG00000012700	fubp1	97	82.844	ENSNBRG00000015099	fubp1	99	84.054	Neolamprologus_brichardi
ENSLBEG00000012700	fubp1	72	70.613	ENSNLEG00000009772	FUBP1	100	65.335	Nomascus_leucogenys
ENSLBEG00000012700	fubp1	50	81.043	ENSMEUG00000007917	-	70	58.559	Notamacropus_eugenii
ENSLBEG00000012700	fubp1	71	88.679	ENSOPRG00000001175	FUBP1	98	56.414	Ochotona_princeps
ENSLBEG00000012700	fubp1	72	75.000	ENSODEG00000002600	-	100	69.595	Octodon_degus
ENSLBEG00000012700	fubp1	97	50.847	ENSODEG00000003657	-	100	48.669	Octodon_degus
ENSLBEG00000012700	fubp1	97	93.145	ENSONIG00000018381	fubp1	97	92.548	Oreochromis_niloticus
ENSLBEG00000012700	fubp1	62	78.338	ENSOANG00000009777	FUBP1	99	68.371	Ornithorhynchus_anatinus
ENSLBEG00000012700	fubp1	97	81.967	ENSORLG00000003540	fubp1	99	83.309	Oryzias_latipes
ENSLBEG00000012700	fubp1	99	90.276	ENSORLG00020005908	fubp1	98	89.550	Oryzias_latipes_hni
ENSLBEG00000012700	fubp1	99	90.145	ENSORLG00015008779	fubp1	99	90.519	Oryzias_latipes_hsok
ENSLBEG00000012700	fubp1	99	90.643	ENSOMEG00000021943	fubp1	99	89.912	Oryzias_melastigma
ENSLBEG00000012700	fubp1	72	73.265	ENSOGAG00000014233	FUBP1	100	66.374	Otolemur_garnettii
ENSLBEG00000012700	fubp1	72	75.159	ENSOARG00000013259	FUBP1	99	69.331	Ovis_aries
ENSLBEG00000012700	fubp1	72	74.790	ENSPPRG00000000413	FUBP1	100	67.365	Panthera_pardus
ENSLBEG00000012700	fubp1	72	74.790	ENSPTIG00000019450	FUBP1	100	67.365	Panthera_tigris_altaica
ENSLBEG00000012700	fubp1	69	75.571	ENSPSIG00000012965	FUBP1	99	67.767	Pelodiscus_sinensis
ENSLBEG00000012700	fubp1	97	78.972	ENSPMGG00000009060	fubp1	99	79.198	Periophthalmus_magnuspinnatus
ENSLBEG00000012700	fubp1	72	75.957	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSLBEG00000012700	fubp1	65	54.839	ENSPMAG00000001644	-	93	55.833	Petromyzon_marinus
ENSLBEG00000012700	fubp1	97	92.687	ENSPFOG00000000238	fubp1	99	92.537	Poecilia_formosa
ENSLBEG00000012700	fubp1	97	88.657	ENSPLAG00000021170	fubp1	99	89.701	Poecilia_latipinna
ENSLBEG00000012700	fubp1	98	85.460	ENSPMEG00000004747	fubp1	99	92.834	Poecilia_mexicana
ENSLBEG00000012700	fubp1	97	92.548	ENSPREG00000017911	fubp1	99	92.399	Poecilia_reticulata
ENSLBEG00000012700	fubp1	77	74.074	ENSPPYG00000001219	-	68	74.200	Pongo_abelii
ENSLBEG00000012700	fubp1	72	74.737	ENSPCAG00000012617	FUBP1	98	67.267	Procavia_capensis
ENSLBEG00000012700	fubp1	72	75.267	ENSPCOG00000024974	FUBP1	100	67.365	Propithecus_coquereli
ENSLBEG00000012700	fubp1	72	68.908	ENSPVAG00000014637	FUBP1	98	63.118	Pteropus_vampyrus
ENSLBEG00000012700	fubp1	97	93.134	ENSPNYG00000004552	fubp1	99	92.537	Pundamilia_nyererei
ENSLBEG00000012700	fubp1	97	83.776	ENSPNAG00000016207	fubp1	100	81.885	Pygocentrus_nattereri
ENSLBEG00000012700	fubp1	72	75.589	ENSRNOG00000043370	Fubp1	100	67.417	Rattus_norvegicus
ENSLBEG00000012700	fubp1	72	74.580	ENSRBIG00000042950	FUBP1	100	67.216	Rhinopithecus_bieti
ENSLBEG00000012700	fubp1	72	74.580	ENSRROG00000043534	FUBP1	100	67.216	Rhinopithecus_roxellana
ENSLBEG00000012700	fubp1	72	74.790	ENSSBOG00000027299	FUBP1	100	67.365	Saimiri_boliviensis_boliviensis
ENSLBEG00000012700	fubp1	68	75.229	ENSSHAG00000005367	FUBP1	99	69.964	Sarcophilus_harrisii
ENSLBEG00000012700	fubp1	97	81.493	ENSSFOG00015010213	fubp1	99	80.000	Scleropages_formosus
ENSLBEG00000012700	fubp1	99	88.395	ENSSMAG00000012029	fubp1	99	88.109	Scophthalmus_maximus
ENSLBEG00000012700	fubp1	99	95.044	ENSSDUG00000007383	fubp1	99	95.044	Seriola_dumerili
ENSLBEG00000012700	fubp1	99	95.044	ENSSLDG00000022863	fubp1	99	95.044	Seriola_lalandi_dorsalis
ENSLBEG00000012700	fubp1	72	87.356	ENSSARG00000011730	FUBP1	53	88.372	Sorex_araneus
ENSLBEG00000012700	fubp1	97	66.859	ENSSPUG00000008389	FUBP1	99	66.284	Sphenodon_punctatus
ENSLBEG00000012700	fubp1	97	94.337	ENSSPAG00000010161	fubp1	99	94.337	Stegastes_partitus
ENSLBEG00000012700	fubp1	68	75.744	ENSTGUG00000006841	FUBP1	100	67.125	Taeniopygia_guttata
ENSLBEG00000012700	fubp1	98	86.000	ENSTRUG00000004615	fubp1	99	85.879	Takifugu_rubripes
ENSLBEG00000012700	fubp1	54	95.918	ENSTNIG00000019815	-	87	95.918	Tetraodon_nigroviridis
ENSLBEG00000012700	fubp1	81	81.548	ENSTBEG00000017333	FUBP1	62	87.500	Tupaia_belangeri
ENSLBEG00000012700	fubp1	72	74.790	ENSTTRG00000000096	FUBP1	98	67.166	Tursiops_truncatus
ENSLBEG00000012700	fubp1	72	74.790	ENSVPAG00000004709	FUBP1	99	67.166	Vicugna_pacos
ENSLBEG00000012700	fubp1	97	81.833	ENSXCOG00000019354	fubp1	100	82.753	Xiphophorus_couchianus
ENSLBEG00000012700	fubp1	89	92.695	ENSXMAG00000007168	fubp1	99	92.508	Xiphophorus_maculatus