EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000012703 (Gene tree)
Gene ID: 109991192
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 21999 bases
Position: chrFKLU01000008.1:3116704-3138702
Accession: 109991192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000016437	zf-CCCH	PF00642.24	7.9e-05	1	1
ENSLBEP00000016437	TRM	PF02005.16	1.2e-141	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017376	-	6320	XM_020643440	ENSLBEP00000016437	671 (aa)	XP_020499096	UPI0009B3C4A3

Gene Model

Click here to download ENSLBEG00000012703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012703	trmt1	84	67.426	ENSG00000104907	TRMT1	100	74.869	Homo_sapiens
ENSLBEG00000012703	trmt1	84	67.075	ENSAMEG00000012598	TRMT1	85	67.075	Ailuropoda_melanoleuca
ENSLBEG00000012703	trmt1	92	76.537	ENSACIG00000018680	trmt1	97	76.537	Amphilophus_citrinellus
ENSLBEG00000012703	trmt1	100	82.712	ENSAOCG00000006781	trmt1	100	81.669	Amphiprion_ocellaris
ENSLBEG00000012703	trmt1	100	83.010	ENSAPEG00000007712	trmt1	100	81.967	Amphiprion_percula
ENSLBEG00000012703	trmt1	100	83.905	ENSATEG00000001872	trmt1	100	83.905	Anabas_testudineus
ENSLBEG00000012703	trmt1	89	65.512	ENSACAG00000003825	TRMT1	97	65.512	Anolis_carolinensis
ENSLBEG00000012703	trmt1	84	65.849	ENSANAG00000023016	TRMT1	92	65.849	Aotus_nancymaae
ENSLBEG00000012703	trmt1	91	81.579	ENSACLG00000010073	trmt1	99	81.579	Astatotilapia_calliptera
ENSLBEG00000012703	trmt1	93	74.568	ENSAMXG00000012026	trmt1	92	76.384	Astyanax_mexicanus
ENSLBEG00000012703	trmt1	87	64.167	ENSBTAG00000019325	TRMT1	85	64.167	Bos_taurus
ENSLBEG00000012703	trmt1	76	41.040	WBGene00006613	trm-1	93	41.040	Caenorhabditis_elegans
ENSLBEG00000012703	trmt1	84	64.572	ENSCJAG00000004566	TRMT1	88	64.572	Callithrix_jacchus
ENSLBEG00000012703	trmt1	84	67.250	ENSCAFG00000017070	TRMT1	90	67.250	Canis_familiaris
ENSLBEG00000012703	trmt1	84	67.193	ENSCAFG00020005397	TRMT1	88	67.135	Canis_lupus_dingo
ENSLBEG00000012703	trmt1	87	64.892	ENSCHIG00000013569	TRMT1	91	64.892	Capra_hircus
ENSLBEG00000012703	trmt1	84	64.273	ENSTSYG00000003207	TRMT1	87	64.273	Carlito_syrichta
ENSLBEG00000012703	trmt1	78	61.538	ENSCAPG00000003355	TRMT1	94	61.538	Cavia_aperea
ENSLBEG00000012703	trmt1	84	64.870	ENSCPOG00000011754	TRMT1	87	64.870	Cavia_porcellus
ENSLBEG00000012703	trmt1	84	64.273	ENSCCAG00000022263	TRMT1	92	64.273	Cebus_capucinus
ENSLBEG00000012703	trmt1	84	66.900	ENSCATG00000039850	TRMT1	86	66.900	Cercocebus_atys
ENSLBEG00000012703	trmt1	68	55.870	ENSCATG00000038220	-	83	55.870	Cercocebus_atys
ENSLBEG00000012703	trmt1	84	66.375	ENSCLAG00000015295	TRMT1	89	63.986	Chinchilla_lanigera
ENSLBEG00000012703	trmt1	70	68.987	ENSCSAG00000006500	TRMT1	89	68.987	Chlorocebus_sabaeus
ENSLBEG00000012703	trmt1	84	69.965	ENSCPBG00000023866	TRMT1	85	70.213	Chrysemys_picta_bellii
ENSLBEG00000012703	trmt1	81	48.270	ENSCING00000002884	-	98	48.270	Ciona_intestinalis
ENSLBEG00000012703	trmt1	80	50.554	ENSCSAVG00000010927	-	100	49.174	Ciona_savignyi
ENSLBEG00000012703	trmt1	81	52.632	ENSCANG00000031650	-	86	52.813	Colobus_angolensis_palliatus
ENSLBEG00000012703	trmt1	84	53.147	ENSCANG00000040631	TRMT1	86	53.147	Colobus_angolensis_palliatus
ENSLBEG00000012703	trmt1	83	66.257	ENSCGRG00001022594	Trmt1	87	66.257	Cricetulus_griseus_chok1gshd
ENSLBEG00000012703	trmt1	83	66.257	ENSCGRG00000017732	Trmt1	86	66.257	Cricetulus_griseus_crigri
ENSLBEG00000012703	trmt1	100	76.741	ENSCSEG00000001643	trmt1	92	81.802	Cynoglossus_semilaevis
ENSLBEG00000012703	trmt1	100	77.198	ENSCVAG00000011886	trmt1	100	76.900	Cyprinodon_variegatus
ENSLBEG00000012703	trmt1	94	73.750	ENSDARG00000010978	trmt1	94	74.097	Danio_rerio
ENSLBEG00000012703	trmt1	76	44.952	ENSDNOG00000048240	-	89	44.952	Dasypus_novemcinctus
ENSLBEG00000012703	trmt1	84	64.974	ENSDORG00000014298	Trmt1	86	64.974	Dipodomys_ordii
ENSLBEG00000012703	trmt1	78	47.103	FBgn0032430	CG6388	89	47.103	Drosophila_melanogaster
ENSLBEG00000012703	trmt1	85	48.958	ENSEBUG00000003449	trmt1	83	49.043	Eptatretus_burgeri
ENSLBEG00000012703	trmt1	84	65.849	ENSEASG00005004050	TRMT1	90	65.849	Equus_asinus_asinus
ENSLBEG00000012703	trmt1	84	65.849	ENSECAG00000016149	TRMT1	90	65.849	Equus_caballus
ENSLBEG00000012703	trmt1	58	55.584	ENSEEUG00000014102	-	99	55.584	Erinaceus_europaeus
ENSLBEG00000012703	trmt1	97	73.222	ENSELUG00000021659	trmt1	95	74.842	Esox_lucius
ENSLBEG00000012703	trmt1	84	66.375	ENSFCAG00000000483	TRMT1	87	66.375	Felis_catus
ENSLBEG00000012703	trmt1	84	65.849	ENSFDAG00000007386	TRMT1	87	65.849	Fukomys_damarensis
ENSLBEG00000012703	trmt1	91	78.396	ENSFHEG00000012865	trmt1	100	78.232	Fundulus_heteroclitus
ENSLBEG00000012703	trmt1	85	74.074	ENSGMOG00000006564	trmt1	99	74.427	Gadus_morhua
ENSLBEG00000012703	trmt1	100	77.794	ENSGAFG00000011862	trmt1	100	78.092	Gambusia_affinis
ENSLBEG00000012703	trmt1	85	81.961	ENSGACG00000000227	trmt1	93	82.487	Gasterosteus_aculeatus
ENSLBEG00000012703	trmt1	88	67.905	ENSGAGG00000016432	TRMT1	89	67.905	Gopherus_agassizii
ENSLBEG00000012703	trmt1	84	67.426	ENSGGOG00000014007	TRMT1	87	67.426	Gorilla_gorilla
ENSLBEG00000012703	trmt1	82	75.592	ENSHBUG00000008821	trmt1	92	75.592	Haplochromis_burtoni
ENSLBEG00000012703	trmt1	84	65.909	ENSHGLG00000015972	TRMT1	87	65.909	Heterocephalus_glaber_female
ENSLBEG00000012703	trmt1	84	61.431	ENSHGLG00100018112	TRMT1	87	61.431	Heterocephalus_glaber_male
ENSLBEG00000012703	trmt1	90	77.303	ENSHCOG00000009447	trmt1	95	77.303	Hippocampus_comes
ENSLBEG00000012703	trmt1	85	75.385	ENSIPUG00000002899	trmt1	86	75.726	Ictalurus_punctatus
ENSLBEG00000012703	trmt1	84	66.375	ENSSTOG00000012531	TRMT1	87	66.375	Ictidomys_tridecemlineatus
ENSLBEG00000012703	trmt1	84	67.016	ENSJJAG00000017154	Trmt1	88	66.957	Jaculus_jaculus
ENSLBEG00000012703	trmt1	99	77.877	ENSKMAG00000011809	trmt1	97	83.362	Kryptolebias_marmoratus
ENSLBEG00000012703	trmt1	85	60.522	ENSLACG00000014585	TRMT1	95	60.417	Latimeria_chalumnae
ENSLBEG00000012703	trmt1	85	69.894	ENSLOCG00000006479	trmt1	98	69.894	Lepisosteus_oculatus
ENSLBEG00000012703	trmt1	84	67.190	ENSLAFG00000014072	TRMT1	88	67.190	Loxodonta_africana
ENSLBEG00000012703	trmt1	84	66.900	ENSMFAG00000033143	TRMT1	86	66.900	Macaca_fascicularis
ENSLBEG00000012703	trmt1	84	61.930	ENSMMUG00000001167	TRMT1	87	61.930	Macaca_mulatta
ENSLBEG00000012703	trmt1	84	66.900	ENSMNEG00000037867	TRMT1	86	66.900	Macaca_nemestrina
ENSLBEG00000012703	trmt1	84	66.725	ENSMLEG00000016142	TRMT1	87	66.725	Mandrillus_leucophaeus
ENSLBEG00000012703	trmt1	99	83.109	ENSMAMG00000004357	trmt1	100	83.109	Mastacembelus_armatus
ENSLBEG00000012703	trmt1	100	79.285	ENSMZEG00005014510	trmt1	100	77.943	Maylandia_zebra
ENSLBEG00000012703	trmt1	87	64.430	ENSMAUG00000011134	Trmt1	90	64.430	Mesocricetus_auratus
ENSLBEG00000012703	trmt1	84	67.133	ENSMICG00000000793	TRMT1	86	67.133	Microcebus_murinus
ENSLBEG00000012703	trmt1	84	65.849	ENSMOCG00000015895	Trmt1	86	65.789	Microtus_ochrogaster
ENSLBEG00000012703	trmt1	93	81.440	ENSMMOG00000011097	trmt1	100	81.440	Mola_mola
ENSLBEG00000012703	trmt1	87	65.136	ENSMODG00000011619	TRMT1	95	65.136	Monodelphis_domestica
ENSLBEG00000012703	trmt1	83	67.430	MGP_CAROLIEiJ_G0031304	Trmt1	86	67.430	Mus_caroli
ENSLBEG00000012703	trmt1	83	67.606	ENSMUSG00000001909	Trmt1	86	67.606	Mus_musculus
ENSLBEG00000012703	trmt1	83	67.430	MGP_SPRETEiJ_G0032422	Trmt1	86	67.430	Mus_spretus
ENSLBEG00000012703	trmt1	84	67.776	ENSMPUG00000004210	TRMT1	82	67.776	Mustela_putorius_furo
ENSLBEG00000012703	trmt1	89	65.404	ENSMLUG00000012809	TRMT1	89	65.404	Myotis_lucifugus
ENSLBEG00000012703	trmt1	85	65.972	ENSNGAG00000022486	Trmt1	87	65.972	Nannospalax_galili
ENSLBEG00000012703	trmt1	75	88.272	ENSNBRG00000024376	trmt1	87	88.272	Neolamprologus_brichardi
ENSLBEG00000012703	trmt1	66	66.212	ENSNLEG00000013019	-	83	66.212	Nomascus_leucogenys
ENSLBEG00000012703	trmt1	84	65.378	ENSMEUG00000013756	TRMT1	96	65.378	Notamacropus_eugenii
ENSLBEG00000012703	trmt1	68	74.000	ENSOPRG00000009471	-	71	74.000	Ochotona_princeps
ENSLBEG00000012703	trmt1	84	65.965	ENSODEG00000010323	TRMT1	87	65.965	Octodon_degus
ENSLBEG00000012703	trmt1	100	82.712	ENSONIG00000000400	trmt1	100	81.371	Oreochromis_niloticus
ENSLBEG00000012703	trmt1	72	68.293	ENSOCUG00000021934	TRMT1	90	69.748	Oryctolagus_cuniculus
ENSLBEG00000012703	trmt1	100	73.746	ENSORLG00000020074	trmt1	97	77.778	Oryzias_latipes
ENSLBEG00000012703	trmt1	100	77.645	ENSORLG00020007561	trmt1	98	80.480	Oryzias_latipes_hni
ENSLBEG00000012703	trmt1	100	77.794	ENSORLG00015006547	trmt1	94	81.190	Oryzias_latipes_hsok
ENSLBEG00000012703	trmt1	100	78.539	ENSOMEG00000019343	trmt1	94	82.172	Oryzias_melastigma
ENSLBEG00000012703	trmt1	84	66.492	ENSOGAG00000025576	TRMT1	90	66.609	Otolemur_garnettii
ENSLBEG00000012703	trmt1	87	52.239	ENSOARG00000009397	TRMT1	85	52.405	Ovis_aries
ENSLBEG00000012703	trmt1	84	57.417	ENSPPRG00000012117	TRMT1	87	59.825	Panthera_pardus
ENSLBEG00000012703	trmt1	63	68.182	ENSPTIG00000008833	TRMT1	82	68.182	Panthera_tigris_altaica
ENSLBEG00000012703	trmt1	82	49.735	ENSPTRG00000050421	-	89	49.735	Pan_troglodytes
ENSLBEG00000012703	trmt1	84	67.426	ENSPTRG00000010557	TRMT1	87	67.426	Pan_troglodytes
ENSLBEG00000012703	trmt1	84	66.900	ENSPANG00000009247	TRMT1	87	66.900	Papio_anubis
ENSLBEG00000012703	trmt1	65	57.143	ENSPANG00000034058	-	78	57.143	Papio_anubis
ENSLBEG00000012703	trmt1	94	71.787	ENSPKIG00000005309	trmt1	93	72.452	Paramormyrops_kingsleyae
ENSLBEG00000012703	trmt1	82	57.885	ENSPSIG00000008762	TRMT1	79	57.885	Pelodiscus_sinensis
ENSLBEG00000012703	trmt1	89	79.630	ENSPMGG00000019764	trmt1	95	79.630	Periophthalmus_magnuspinnatus
ENSLBEG00000012703	trmt1	84	66.608	ENSPEMG00000016247	Trmt1	86	66.725	Peromyscus_maniculatus_bairdii
ENSLBEG00000012703	trmt1	85	63.158	ENSPMAG00000004329	trmt1	90	63.158	Petromyzon_marinus
ENSLBEG00000012703	trmt1	84	66.314	ENSPCIG00000019273	TRMT1	91	64.626	Phascolarctos_cinereus
ENSLBEG00000012703	trmt1	100	78.539	ENSPFOG00000008527	trmt1	100	77.943	Poecilia_formosa
ENSLBEG00000012703	trmt1	100	77.347	ENSPLAG00000018788	trmt1	100	78.409	Poecilia_latipinna
ENSLBEG00000012703	trmt1	100	78.689	ENSPMEG00000013120	trmt1	100	78.241	Poecilia_mexicana
ENSLBEG00000012703	trmt1	99	76.992	ENSPREG00000000211	trmt1	96	76.842	Poecilia_reticulata
ENSLBEG00000012703	trmt1	84	66.725	ENSPPYG00000009622	TRMT1	87	66.725	Pongo_abelii
ENSLBEG00000012703	trmt1	84	62.697	ENSPCAG00000003698	TRMT1	87	62.697	Procavia_capensis
ENSLBEG00000012703	trmt1	84	66.958	ENSPCOG00000008653	TRMT1	87	66.958	Propithecus_coquereli
ENSLBEG00000012703	trmt1	87	65.488	ENSPVAG00000015076	TRMT1	90	65.488	Pteropus_vampyrus
ENSLBEG00000012703	trmt1	91	80.099	ENSPNYG00000013960	trmt1	99	80.099	Pundamilia_nyererei
ENSLBEG00000012703	trmt1	94	65.728	ENSPNAG00000024859	trmt1	99	65.517	Pygocentrus_nattereri
ENSLBEG00000012703	trmt1	83	66.373	ENSRNOG00000002914	Trmt1	89	66.549	Rattus_norvegicus
ENSLBEG00000012703	trmt1	84	67.250	ENSRBIG00000038324	TRMT1	86	67.250	Rhinopithecus_bieti
ENSLBEG00000012703	trmt1	81	50.090	ENSRBIG00000037505	-	87	50.090	Rhinopithecus_bieti
ENSLBEG00000012703	trmt1	81	49.550	ENSRROG00000031847	-	86	49.550	Rhinopithecus_roxellana
ENSLBEG00000012703	trmt1	84	67.250	ENSRROG00000028599	TRMT1	86	67.250	Rhinopithecus_roxellana
ENSLBEG00000012703	trmt1	75	38.649	YDR120C	-	92	38.649	Saccharomyces_cerevisiae
ENSLBEG00000012703	trmt1	84	64.623	ENSSBOG00000028861	TRMT1	92	64.623	Saimiri_boliviensis_boliviensis
ENSLBEG00000012703	trmt1	84	67.430	ENSSHAG00000014381	TRMT1	96	65.058	Sarcophilus_harrisii
ENSLBEG00000012703	trmt1	99	70.299	ENSSFOG00015004139	trmt1	89	76.000	Scleropages_formosus
ENSLBEG00000012703	trmt1	100	80.323	ENSSMAG00000021136	trmt1	100	80.470	Scophthalmus_maximus
ENSLBEG00000012703	trmt1	100	83.756	ENSSDUG00000012740	trmt1	100	83.756	Seriola_dumerili
ENSLBEG00000012703	trmt1	100	83.607	ENSSLDG00000005971	trmt1	100	83.607	Seriola_lalandi_dorsalis
ENSLBEG00000012703	trmt1	76	65.049	ENSSARG00000005138	TRMT1	91	65.049	Sorex_araneus
ENSLBEG00000012703	trmt1	85	52.504	ENSSPUG00000001084	TRMT1	97	51.216	Sphenodon_punctatus
ENSLBEG00000012703	trmt1	100	79.881	ENSSPAG00000007153	trmt1	99	85.284	Stegastes_partitus
ENSLBEG00000012703	trmt1	84	66.783	ENSSSCG00000013744	TRMT1	90	66.783	Sus_scrofa
ENSLBEG00000012703	trmt1	96	72.603	ENSTRUG00000010700	trmt1	95	71.689	Takifugu_rubripes
ENSLBEG00000012703	trmt1	86	83.391	ENSTNIG00000018808	trmt1	100	83.391	Tetraodon_nigroviridis
ENSLBEG00000012703	trmt1	84	64.273	ENSTTRG00000006379	TRMT1	87	64.273	Tursiops_truncatus
ENSLBEG00000012703	trmt1	84	67.601	ENSUAMG00000022911	TRMT1	93	64.757	Ursus_americanus
ENSLBEG00000012703	trmt1	84	67.250	ENSUMAG00000006027	TRMT1	90	67.250	Ursus_maritimus
ENSLBEG00000012703	trmt1	84	67.426	ENSVVUG00000024177	TRMT1	86	67.426	Vulpes_vulpes
ENSLBEG00000012703	trmt1	68	68.478	ENSXETG00000033863	TRMT1	92	68.478	Xenopus_tropicalis
ENSLBEG00000012703	trmt1	100	78.092	ENSXCOG00000015733	trmt1	100	77.943	Xiphophorus_couchianus
ENSLBEG00000012703	trmt1	85	86.387	ENSXMAG00000013823	trmt1	99	86.387	Xiphophorus_maculatus