EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000012710 (Gene tree)
Gene ID: 109995424
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 20334 bases
Position: chrFKLU01000325.1:119044-139377
Accession: 109995424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000016453	RNase_Zc3h12a	PF11977.8	2.2e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017394	-	3168	XM_020649149	ENSLBEP00000016453	923 (aa)	XP_020504805	UPI0009B48F28

Gene Model

Click here to download ENSLBEG00000012710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000012710	-	84	48.575	ENSLBEG00000012554	-	86	68.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012710	-	100	62.581	ENSAPOG00000001632	-	99	78.535	Acanthochromis_polyacanthus
ENSLBEG00000012710	-	67	56.447	ENSAPOG00000015355	-	68	54.714	Acanthochromis_polyacanthus
ENSLBEG00000012710	-	79	62.712	ENSACIG00000001362	-	78	61.667	Amphilophus_citrinellus
ENSLBEG00000012710	-	82	55.677	ENSAOCG00000003866	-	96	73.745	Amphiprion_ocellaris
ENSLBEG00000012710	-	82	55.677	ENSAPEG00000005727	-	93	67.550	Amphiprion_percula
ENSLBEG00000012710	-	53	64.578	ENSAPEG00000018582	-	99	46.906	Amphiprion_percula
ENSLBEG00000012710	-	100	69.397	ENSATEG00000002260	-	97	83.577	Anabas_testudineus
ENSLBEG00000012710	-	67	55.418	ENSATEG00000004134	-	87	46.916	Anabas_testudineus
ENSLBEG00000012710	-	100	68.534	ENSACLG00000018493	-	100	68.858	Astatotilapia_calliptera
ENSLBEG00000012710	-	99	45.142	ENSACLG00000027924	-	83	48.571	Astatotilapia_calliptera
ENSLBEG00000012710	-	99	62.979	ENSCSEG00000008542	-	99	61.809	Cynoglossus_semilaevis
ENSLBEG00000012710	-	57	64.792	ENSCSEG00000010073	-	93	69.858	Cynoglossus_semilaevis
ENSLBEG00000012710	-	87	66.667	ENSCVAG00000002328	-	53	66.667	Cyprinodon_variegatus
ENSLBEG00000012710	-	99	54.815	ENSELUG00000005470	-	99	55.941	Esox_lucius
ENSLBEG00000012710	-	54	59.519	ENSELUG00000009319	-	97	47.590	Esox_lucius
ENSLBEG00000012710	-	55	65.217	ENSFHEG00000021225	-	85	68.153	Fundulus_heteroclitus
ENSLBEG00000012710	-	72	54.299	ENSGMOG00000017975	-	99	53.765	Gadus_morhua
ENSLBEG00000012710	-	99	43.421	ENSGAFG00000005290	-	65	53.612	Gambusia_affinis
ENSLBEG00000012710	-	72	64.199	ENSGACG00000001339	-	99	63.746	Gasterosteus_aculeatus
ENSLBEG00000012710	-	72	46.647	ENSGACG00000014201	-	99	46.143	Gasterosteus_aculeatus
ENSLBEG00000012710	-	99	45.142	ENSHBUG00000006831	-	83	49.286	Haplochromis_burtoni
ENSLBEG00000012710	-	81	51.385	ENSHCOG00000008878	-	62	65.244	Hippocampus_comes
ENSLBEG00000012710	-	66	54.080	ENSKMAG00000011694	-	99	43.844	Kryptolebias_marmoratus
ENSLBEG00000012710	-	100	73.899	ENSMAMG00000020372	-	99	73.735	Mastacembelus_armatus
ENSLBEG00000012710	-	79	53.834	ENSMAMG00000021794	-	89	76.016	Mastacembelus_armatus
ENSLBEG00000012710	-	100	68.319	ENSMZEG00005019137	-	90	82.051	Maylandia_zebra
ENSLBEG00000012710	-	99	45.535	ENSMZEG00005007718	-	83	47.642	Maylandia_zebra
ENSLBEG00000012710	-	100	67.384	ENSMMOG00000019526	-	94	67.492	Mola_mola
ENSLBEG00000012710	-	87	49.165	ENSMMOG00000005728	-	88	68.667	Mola_mola
ENSLBEG00000012710	-	67	53.929	ENSMALG00000010501	-	84	48.456	Monopterus_albus
ENSLBEG00000012710	-	99	45.854	ENSNBRG00000006978	-	83	48.694	Neolamprologus_brichardi
ENSLBEG00000012710	-	100	67.745	ENSNBRG00000012175	-	90	82.051	Neolamprologus_brichardi
ENSLBEG00000012710	-	99	46.192	ENSONIG00000012268	-	99	49.630	Oreochromis_niloticus
ENSLBEG00000012710	-	85	48.733	ENSORLG00000029243	-	92	57.895	Oryzias_latipes
ENSLBEG00000012710	-	99	45.915	ENSORLG00020017005	-	87	45.949	Oryzias_latipes_hni
ENSLBEG00000012710	-	99	45.201	ENSORLG00015015211	-	87	46.037	Oryzias_latipes_hsok
ENSLBEG00000012710	-	99	46.336	ENSOMEG00000006666	-	86	47.944	Oryzias_melastigma
ENSLBEG00000012710	-	83	65.650	ENSPMGG00000020126	-	79	65.424	Periophthalmus_magnuspinnatus
ENSLBEG00000012710	-	99	44.300	ENSPLAG00000009867	-	86	45.600	Poecilia_latipinna
ENSLBEG00000012710	-	100	60.949	ENSPMEG00000011676	-	100	60.626	Poecilia_mexicana
ENSLBEG00000012710	-	99	43.513	ENSPMEG00000006624	-	86	45.829	Poecilia_mexicana
ENSLBEG00000012710	-	98	60.636	ENSPREG00000001607	-	76	84.454	Poecilia_reticulata
ENSLBEG00000012710	-	99	44.533	ENSPREG00000010838	-	99	42.955	Poecilia_reticulata
ENSLBEG00000012710	-	99	45.025	ENSSMAG00000007545	-	87	47.006	Scophthalmus_maximus
ENSLBEG00000012710	-	99	72.843	ENSSMAG00000007258	-	99	73.482	Scophthalmus_maximus
ENSLBEG00000012710	-	100	72.454	ENSSDUG00000013237	-	99	78.608	Seriola_dumerili
ENSLBEG00000012710	-	100	76.791	ENSSLDG00000004886	-	100	76.898	Seriola_lalandi_dorsalis
ENSLBEG00000012710	-	67	54.893	ENSSPAG00000009485	-	99	45.986	Stegastes_partitus
ENSLBEG00000012710	-	100	70.771	ENSSPAG00000001850	-	100	71.413	Stegastes_partitus
ENSLBEG00000012710	-	67	52.833	ENSTRUG00000022519	-	99	44.929	Takifugu_rubripes
ENSLBEG00000012710	-	73	48.138	ENSTNIG00000014519	-	94	74.194	Tetraodon_nigroviridis
ENSLBEG00000012710	-	99	59.223	ENSXMAG00000014715	-	87	84.583	Xiphophorus_maculatus
ENSLBEG00000012710	-	68	53.666	ENSXMAG00000027171	-	99	43.373	Xiphophorus_maculatus