EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000012897 (Gene tree)
Gene ID: 109995973
Gene Symbol: rbm19
Alias: nil per os|npo
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 6889 bases
Position: chrFKLU01000348.1:286466-293354
Accession: 109995973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017041	RRM_1	PF00076.22	8.3e-76	1	6
ENSLBEP00000017041	RRM_1	PF00076.22	8.3e-76	2	6
ENSLBEP00000017041	RRM_1	PF00076.22	8.3e-76	3	6
ENSLBEP00000017041	RRM_1	PF00076.22	8.3e-76	4	6
ENSLBEP00000017041	RRM_1	PF00076.22	8.3e-76	5	6
ENSLBEP00000017041	RRM_1	PF00076.22	8.3e-76	6	6
ENSLBEP00000017018	RRM_1	PF00076.22	1.2e-75	1	6
ENSLBEP00000017018	RRM_1	PF00076.22	1.2e-75	2	6
ENSLBEP00000017018	RRM_1	PF00076.22	1.2e-75	3	6
ENSLBEP00000017018	RRM_1	PF00076.22	1.2e-75	4	6
ENSLBEP00000017018	RRM_1	PF00076.22	1.2e-75	5	6
ENSLBEP00000017018	RRM_1	PF00076.22	1.2e-75	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017979	-	2685	XM_020649888	ENSLBEP00000017018	894 (aa)	XP_020505544	-
ENSLBET00000018005	-	2562	-	ENSLBEP00000017041	853 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000012897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000012897	rbm19	57	40.789	ENSLBEG00000010084	pabpc1l	60	40.789
ENSLBEG00000012897	rbm19	70	36.000	ENSLBEG00000026845	pabpc1b	59	36.000
ENSLBEG00000012897	rbm19	75	36.000	ENSLBEG00000024002	-	61	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012897	rbm19	99	57.469	ENSG00000122965	RBM19	85	74.737	Homo_sapiens
ENSLBEG00000012897	rbm19	100	83.496	ENSAPOG00000010507	rbm19	100	84.382	Acanthochromis_polyacanthus
ENSLBEG00000012897	rbm19	99	55.934	ENSAMEG00000008544	RBM19	99	55.785	Ailuropoda_melanoleuca
ENSLBEG00000012897	rbm19	98	81.576	ENSACIG00000017780	rbm19	99	82.373	Amphilophus_citrinellus
ENSLBEG00000012897	rbm19	100	82.473	ENSAOCG00000008554	rbm19	100	82.777	Amphiprion_ocellaris
ENSLBEG00000012897	rbm19	97	80.842	ENSAPEG00000022381	rbm19	96	81.314	Amphiprion_percula
ENSLBEG00000012897	rbm19	99	84.125	ENSATEG00000007000	rbm19	99	84.624	Anabas_testudineus
ENSLBEG00000012897	rbm19	98	53.963	ENSAPLG00000015319	RBM19	99	53.341	Anas_platyrhynchos
ENSLBEG00000012897	rbm19	95	63.540	ENSACAG00000005065	RBM19	99	56.735	Anolis_carolinensis
ENSLBEG00000012897	rbm19	99	57.944	ENSANAG00000024136	RBM19	99	57.840	Aotus_nancymaae
ENSLBEG00000012897	rbm19	100	77.522	ENSACLG00000001399	rbm19	100	77.961	Astatotilapia_calliptera
ENSLBEG00000012897	rbm19	67	70.687	ENSAMXG00000017073	rbm19	99	61.487	Astyanax_mexicanus
ENSLBEG00000012897	rbm19	99	57.007	ENSBTAG00000031824	RBM19	99	58.254	Bos_taurus
ENSLBEG00000012897	rbm19	80	47.525	WBGene00004315	rbd-1	89	47.525	Caenorhabditis_elegans
ENSLBEG00000012897	rbm19	99	56.463	ENSCJAG00000009798	RBM19	99	57.676	Callithrix_jacchus
ENSLBEG00000012897	rbm19	99	56.477	ENSCAFG00000009146	RBM19	98	57.054	Canis_familiaris
ENSLBEG00000012897	rbm19	99	56.580	ENSCAFG00020017862	RBM19	98	57.158	Canis_lupus_dingo
ENSLBEG00000012897	rbm19	99	56.513	ENSCHIG00000014917	RBM19	99	57.513	Capra_hircus
ENSLBEG00000012897	rbm19	95	56.092	ENSTSYG00000007207	RBM19	96	56.667	Carlito_syrichta
ENSLBEG00000012897	rbm19	98	57.463	ENSCAPG00000006869	RBM19	98	57.849	Cavia_aperea
ENSLBEG00000012897	rbm19	99	57.867	ENSCPOG00000026629	RBM19	99	59.164	Cavia_porcellus
ENSLBEG00000012897	rbm19	99	57.867	ENSCCAG00000021665	-	99	57.660	Cebus_capucinus
ENSLBEG00000012897	rbm19	95	50.911	ENSCCAG00000026637	-	99	51.033	Cebus_capucinus
ENSLBEG00000012897	rbm19	98	57.143	ENSCATG00000035841	RBM19	99	57.233	Cercocebus_atys
ENSLBEG00000012897	rbm19	99	57.377	ENSCLAG00000009965	RBM19	99	56.996	Chinchilla_lanigera
ENSLBEG00000012897	rbm19	99	64.574	ENSCSAG00000002352	RBM19	95	64.574	Chlorocebus_sabaeus
ENSLBEG00000012897	rbm19	99	57.835	ENSCPBG00000011990	RBM19	99	58.539	Chrysemys_picta_bellii
ENSLBEG00000012897	rbm19	81	53.094	ENSCING00000023076	-	97	52.153	Ciona_intestinalis
ENSLBEG00000012897	rbm19	99	57.261	ENSCANG00000035927	RBM19	99	57.451	Colobus_angolensis_palliatus
ENSLBEG00000012897	rbm19	99	56.237	ENSCGRG00001000323	Rbm19	99	57.306	Cricetulus_griseus_chok1gshd
ENSLBEG00000012897	rbm19	99	56.237	ENSCGRG00000010371	Rbm19	99	57.306	Cricetulus_griseus_crigri
ENSLBEG00000012897	rbm19	100	76.709	ENSCSEG00000017436	rbm19	100	77.316	Cynoglossus_semilaevis
ENSLBEG00000012897	rbm19	100	77.297	ENSCVAG00000000300	rbm19	100	77.946	Cyprinodon_variegatus
ENSLBEG00000012897	rbm19	99	66.199	ENSDARG00000042590	rbm19	99	66.523	Danio_rerio
ENSLBEG00000012897	rbm19	99	55.394	ENSDNOG00000024534	RBM19	95	56.740	Dasypus_novemcinctus
ENSLBEG00000012897	rbm19	97	57.680	ENSDORG00000008549	Rbm19	100	57.358	Dipodomys_ordii
ENSLBEG00000012897	rbm19	98	38.847	FBgn0036018	CG3335	98	38.720	Drosophila_melanogaster
ENSLBEG00000012897	rbm19	63	79.710	ENSETEG00000016887	-	56	79.412	Echinops_telfairi
ENSLBEG00000012897	rbm19	79	44.156	ENSEBUG00000008521	-	91	44.106	Eptatretus_burgeri
ENSLBEG00000012897	rbm19	99	56.966	ENSEASG00005009452	RBM19	99	57.720	Equus_asinus_asinus
ENSLBEG00000012897	rbm19	99	56.746	ENSECAG00000023716	RBM19	99	57.187	Equus_caballus
ENSLBEG00000012897	rbm19	100	71.737	ENSELUG00000012561	rbm19	100	72.276	Esox_lucius
ENSLBEG00000012897	rbm19	99	55.892	ENSFCAG00000002962	RBM19	98	56.335	Felis_catus
ENSLBEG00000012897	rbm19	98	58.184	ENSFALG00000007768	RBM19	99	57.801	Ficedula_albicollis
ENSLBEG00000012897	rbm19	99	56.172	ENSFDAG00000004629	RBM19	99	57.202	Fukomys_damarensis
ENSLBEG00000012897	rbm19	100	77.729	ENSFHEG00000012578	rbm19	100	78.057	Fundulus_heteroclitus
ENSLBEG00000012897	rbm19	97	71.316	ENSGMOG00000013120	rbm19	100	71.766	Gadus_morhua
ENSLBEG00000012897	rbm19	98	57.367	ENSGALG00000008289	RBM19	99	57.648	Gallus_gallus
ENSLBEG00000012897	rbm19	100	77.199	ENSGAFG00000012337	rbm19	100	78.270	Gambusia_affinis
ENSLBEG00000012897	rbm19	99	79.978	ENSGACG00000009462	rbm19	100	80.459	Gasterosteus_aculeatus
ENSLBEG00000012897	rbm19	64	64.555	ENSGAGG00000019457	RBM19	99	64.726	Gopherus_agassizii
ENSLBEG00000012897	rbm19	99	56.967	ENSGGOG00000007371	RBM19	99	57.884	Gorilla_gorilla
ENSLBEG00000012897	rbm19	100	78.993	ENSHBUG00000009047	rbm19	100	79.322	Haplochromis_burtoni
ENSLBEG00000012897	rbm19	99	56.649	ENSHGLG00000010899	RBM19	99	58.394	Heterocephalus_glaber_female
ENSLBEG00000012897	rbm19	99	56.062	ENSHGLG00100017936	RBM19	99	57.379	Heterocephalus_glaber_male
ENSLBEG00000012897	rbm19	100	78.905	ENSHCOG00000016446	rbm19	100	79.133	Hippocampus_comes
ENSLBEG00000012897	rbm19	99	65.525	ENSIPUG00000023849	rbm19	99	64.989	Ictalurus_punctatus
ENSLBEG00000012897	rbm19	100	78.879	ENSKMAG00000014807	rbm19	100	79.418	Kryptolebias_marmoratus
ENSLBEG00000012897	rbm19	66	63.316	ENSLACG00000012030	RBM19	100	58.787	Latimeria_chalumnae
ENSLBEG00000012897	rbm19	99	64.925	ENSLOCG00000008341	rbm19	99	65.385	Lepisosteus_oculatus
ENSLBEG00000012897	rbm19	95	53.659	ENSLAFG00000004187	RBM19	100	55.233	Loxodonta_africana
ENSLBEG00000012897	rbm19	99	57.172	ENSMFAG00000046091	RBM19	97	55.782	Macaca_fascicularis
ENSLBEG00000012897	rbm19	99	57.570	ENSMMUG00000010496	RBM19	99	57.350	Macaca_mulatta
ENSLBEG00000012897	rbm19	99	53.109	ENSMNEG00000028452	RBM19	99	54.779	Macaca_nemestrina
ENSLBEG00000012897	rbm19	99	56.012	ENSMLEG00000034550	RBM19	98	56.004	Mandrillus_leucophaeus
ENSLBEG00000012897	rbm19	100	84.290	ENSMAMG00000014397	rbm19	100	84.724	Mastacembelus_armatus
ENSLBEG00000012897	rbm19	100	80.390	ENSMZEG00005016607	rbm19	100	80.932	Maylandia_zebra
ENSLBEG00000012897	rbm19	97	52.062	ENSMGAG00000010087	RBM19	99	52.169	Meleagris_gallopavo
ENSLBEG00000012897	rbm19	99	56.472	ENSMAUG00000019290	Rbm19	99	57.906	Mesocricetus_auratus
ENSLBEG00000012897	rbm19	99	57.604	ENSMICG00000014423	RBM19	99	58.125	Microcebus_murinus
ENSLBEG00000012897	rbm19	99	78.364	ENSMMOG00000017839	rbm19	99	78.579	Mola_mola
ENSLBEG00000012897	rbm19	99	58.811	ENSMODG00000003597	RBM19	99	58.639	Monodelphis_domestica
ENSLBEG00000012897	rbm19	100	81.947	ENSMALG00000012647	rbm19	100	81.838	Monopterus_albus
ENSLBEG00000012897	rbm19	99	56.042	MGP_CAROLIEiJ_G0027656	Rbm19	99	57.696	Mus_caroli
ENSLBEG00000012897	rbm19	99	56.563	ENSMUSG00000029594	Rbm19	99	57.592	Mus_musculus
ENSLBEG00000012897	rbm19	99	57.143	MGP_PahariEiJ_G0024238	Rbm19	99	58.115	Mus_pahari
ENSLBEG00000012897	rbm19	99	56.712	MGP_SPRETEiJ_G0028656	Rbm19	99	57.531	Mus_spretus
ENSLBEG00000012897	rbm19	99	55.364	ENSMPUG00000002694	RBM19	98	56.996	Mustela_putorius_furo
ENSLBEG00000012897	rbm19	99	57.260	ENSMLUG00000015075	RBM19	99	57.975	Myotis_lucifugus
ENSLBEG00000012897	rbm19	99	57.188	ENSNGAG00000009076	Rbm19	99	57.382	Nannospalax_galili
ENSLBEG00000012897	rbm19	100	78.067	ENSNBRG00000005913	rbm19	100	79.393	Neolamprologus_brichardi
ENSLBEG00000012897	rbm19	99	56.849	ENSNLEG00000000190	RBM19	99	57.780	Nomascus_leucogenys
ENSLBEG00000012897	rbm19	95	55.111	ENSMEUG00000004045	RBM19	91	55.111	Notamacropus_eugenii
ENSLBEG00000012897	rbm19	99	57.570	ENSOPRG00000012064	RBM19	99	58.539	Ochotona_princeps
ENSLBEG00000012897	rbm19	99	56.586	ENSODEG00000012977	RBM19	99	57.082	Octodon_degus
ENSLBEG00000012897	rbm19	99	77.392	ENSONIG00000013576	rbm19	100	82.663	Oreochromis_niloticus
ENSLBEG00000012897	rbm19	99	57.217	ENSOCUG00000009398	RBM19	99	56.367	Oryctolagus_cuniculus
ENSLBEG00000012897	rbm19	100	78.028	ENSORLG00000008077	rbm19	100	78.135	Oryzias_latipes
ENSLBEG00000012897	rbm19	99	77.909	ENSORLG00020013187	rbm19	100	77.909	Oryzias_latipes_hni
ENSLBEG00000012897	rbm19	100	77.837	ENSORLG00015001774	rbm19	100	77.837	Oryzias_latipes_hsok
ENSLBEG00000012897	rbm19	100	78.801	ENSOMEG00000003334	rbm19	100	79.015	Oryzias_melastigma
ENSLBEG00000012897	rbm19	95	54.535	ENSOGAG00000000602	RBM19	100	54.535	Otolemur_garnettii
ENSLBEG00000012897	rbm19	99	56.782	ENSOARG00000006827	RBM19	99	57.676	Ovis_aries
ENSLBEG00000012897	rbm19	99	57.617	ENSPPAG00000043712	RBM19	99	57.720	Pan_paniscus
ENSLBEG00000012897	rbm19	99	56.322	ENSPPRG00000023027	RBM19	98	56.740	Panthera_pardus
ENSLBEG00000012897	rbm19	99	54.749	ENSPTIG00000011096	RBM19	99	54.770	Panthera_tigris_altaica
ENSLBEG00000012897	rbm19	99	57.617	ENSPTRG00000005494	RBM19	99	57.720	Pan_troglodytes
ENSLBEG00000012897	rbm19	99	56.360	ENSPANG00000004795	RBM19	95	57.246	Papio_anubis
ENSLBEG00000012897	rbm19	99	65.551	ENSPKIG00000017095	rbm19	99	65.665	Paramormyrops_kingsleyae
ENSLBEG00000012897	rbm19	88	56.437	ENSPSIG00000008191	RBM19	99	56.897	Pelodiscus_sinensis
ENSLBEG00000012897	rbm19	88	77.011	ENSPMGG00000019087	rbm19	99	78.089	Periophthalmus_magnuspinnatus
ENSLBEG00000012897	rbm19	99	57.263	ENSPEMG00000018058	Rbm19	99	57.878	Peromyscus_maniculatus_bairdii
ENSLBEG00000012897	rbm19	99	57.425	ENSPCIG00000028861	RBM19	99	58.152	Phascolarctos_cinereus
ENSLBEG00000012897	rbm19	99	77.599	ENSPFOG00000015300	rbm19	99	78.778	Poecilia_formosa
ENSLBEG00000012897	rbm19	100	78.051	ENSPLAG00000000059	rbm19	100	79.229	Poecilia_latipinna
ENSLBEG00000012897	rbm19	99	77.599	ENSPMEG00000018585	rbm19	99	78.457	Poecilia_mexicana
ENSLBEG00000012897	rbm19	100	79.203	ENSPREG00000000978	rbm19	100	79.396	Poecilia_reticulata
ENSLBEG00000012897	rbm19	99	55.521	ENSPPYG00000004993	RBM19	99	55.809	Pongo_abelii
ENSLBEG00000012897	rbm19	68	59.641	ENSPCAG00000005063	-	58	59.641	Procavia_capensis
ENSLBEG00000012897	rbm19	99	57.292	ENSPCOG00000016190	RBM19	99	57.708	Propithecus_coquereli
ENSLBEG00000012897	rbm19	99	55.967	ENSPVAG00000011618	RBM19	99	56.082	Pteropus_vampyrus
ENSLBEG00000012897	rbm19	100	77.340	ENSPNYG00000017434	rbm19	100	78.617	Pundamilia_nyererei
ENSLBEG00000012897	rbm19	99	66.237	ENSPNAG00000012069	rbm19	99	67.095	Pygocentrus_nattereri
ENSLBEG00000012897	rbm19	99	55.648	ENSRNOG00000001397	Rbm19	99	57.143	Rattus_norvegicus
ENSLBEG00000012897	rbm19	99	56.952	ENSRBIG00000041419	RBM19	99	56.920	Rhinopithecus_bieti
ENSLBEG00000012897	rbm19	99	56.849	ENSRROG00000031938	RBM19	99	57.335	Rhinopithecus_roxellana
ENSLBEG00000012897	rbm19	63	37.755	YPR112C	-	72	37.755	Saccharomyces_cerevisiae
ENSLBEG00000012897	rbm19	87	49.467	ENSSBOG00000022679	-	99	49.597	Saimiri_boliviensis_boliviensis
ENSLBEG00000012897	rbm19	99	56.828	ENSSBOG00000021434	-	99	56.917	Saimiri_boliviensis_boliviensis
ENSLBEG00000012897	rbm19	99	57.098	ENSSHAG00000012256	RBM19	99	57.983	Sarcophilus_harrisii
ENSLBEG00000012897	rbm19	99	62.951	ENSSFOG00015005124	rbm19	99	63.617	Scleropages_formosus
ENSLBEG00000012897	rbm19	100	83.172	ENSSMAG00000011828	rbm19	100	83.495	Scophthalmus_maximus
ENSLBEG00000012897	rbm19	100	83.423	ENSSDUG00000013544	rbm19	100	83.315	Seriola_dumerili
ENSLBEG00000012897	rbm19	100	81.561	ENSSLDG00000025413	rbm19	100	81.166	Seriola_lalandi_dorsalis
ENSLBEG00000012897	rbm19	64	63.385	ENSSPUG00000011064	RBM19	100	64.605	Sphenodon_punctatus
ENSLBEG00000012897	rbm19	97	83.525	ENSSPAG00000018685	rbm19	98	84.368	Stegastes_partitus
ENSLBEG00000012897	rbm19	99	57.900	ENSSSCG00000009868	RBM19	99	58.431	Sus_scrofa
ENSLBEG00000012897	rbm19	99	57.338	ENSTGUG00000009017	RBM19	99	56.875	Taeniopygia_guttata
ENSLBEG00000012897	rbm19	99	74.473	ENSTRUG00000016032	rbm19	99	75.452	Takifugu_rubripes
ENSLBEG00000012897	rbm19	60	84.498	ENSTNIG00000015903	rbm19	100	84.498	Tetraodon_nigroviridis
ENSLBEG00000012897	rbm19	70	80.328	ENSTBEG00000000703	RBM19	69	80.328	Tupaia_belangeri
ENSLBEG00000012897	rbm19	89	54.698	ENSTTRG00000003987	RBM19	84	56.419	Tursiops_truncatus
ENSLBEG00000012897	rbm19	98	56.517	ENSUAMG00000002076	RBM19	98	56.263	Ursus_americanus
ENSLBEG00000012897	rbm19	99	57.202	ENSUMAG00000010816	RBM19	99	56.952	Ursus_maritimus
ENSLBEG00000012897	rbm19	99	56.995	ENSVVUG00000007886	RBM19	98	57.261	Vulpes_vulpes
ENSLBEG00000012897	rbm19	99	54.931	ENSXETG00000017668	rbm19	99	55.841	Xenopus_tropicalis
ENSLBEG00000012897	rbm19	100	76.956	ENSXCOG00000016995	rbm19	100	76.948	Xiphophorus_couchianus
ENSLBEG00000012897	rbm19	100	77.706	ENSXMAG00000007641	rbm19	100	78.335	Xiphophorus_maculatus